OR52Z1 ORF clone FHC11281

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Halotag ORF Clone FHC11281

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Clone info.

Species

human

Clone Name

pFN21AE0808 Sequence (with vector) Restriction Map

Product ID

FHC11281

Flexi Clone PID

FXC11281

ORF Sequence

DNA sequence (843 bp)
Protein sequence (281 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529243]

Gene

KIEE0808

Symbol

OR52Z1

Alias : OR52Z1P

Description

olfactory receptor, family 52, subfamily Z, member 1 (gene/pseudogene)

Original Clone ID

cp01208

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 843 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 281 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS53598.1 3.7e-46 57.6 OR52B2 CCDS31384.1 4.5e-46 58.5 OR52D1 CCDS31400.1 1.3e-45 59.1 OR52E8 CCDS41611.1 6.4e-45 59.1 OR52B6 CCDS31386.1 1.6e-42 54.3 OR52H1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 47 PR00237 GPCR IPR000725 59 70 PR00245 Olfactory receptor IPR000276 71 93 PR00237 GPCR IPR000725 96 108 PR00245 Olfactory receptor IPR000725 142 158 PR00245 Olfactory receptor IPR000276 165 188 PR00237 GPCR IPR000725 202 211 PR00245 Olfactory receptor IPR000276 241 267 PR00237 GPCR IPR000725 252 263 PR00245 Olfactory receptor HMMPfam IPR000276 8 259 PF00001 GPCR ProfileScan IPR017452 8 259 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 2 YIVAVAGNIFLIFLIMTERSLHE 24 PRIMARY 23 2 31 SMLASANFLLAAAAAPEVLAILW 53 PRIMARY 23 3 76 VAESAILLAMAFDRYVAICYPLR 98 SECONDARY 23 4 110 IGIAAVVRSFFICCPFIFLVYRL 132 PRIMARY 23 5 172 STGLDIVLIIISYTMILHAVFQM 194 PRIMARY 23 6 208 GSHICVIFMFYTPAFFSFLAHRF 230 PRIMARY 23 7 238 HIHILVGSLYVLVPPMLNPIIYG 260 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_110401 320 611268 47.3 97.5 NP_689643 318 611267 46.9 97.5 NP_001005191 312 611538 34.6 99.6 NP_835462 317 608493 30.9 98.6 NP_002539 312 164342 32.4 94.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0808 Download

>KIEE0808  843 bp
ATGTACATTGTGGCTGTTGCAGGCAATATCTTCTTGATCTTCCTGATCATGACTGAGCGC
AGTCTCCATGAGCCCTTGTATCTCTTCCTATCCATGCTGGCCTCAGCCAACTTCCTGCTC
GCCGCTGCTGCAGCCCCTGAGGTGCTGGCTATCCTCTGGTTCCACTCCATGGACATATCC
TTTGGTAGTTGTGTGTCTCAGATGTTCTTCATACATTTCATCTTTGTGGCAGAATCTGCT
ATTCTCCTGGCAATGGCATTTGACCGCTATGTGGCCATCTGTTACCCACTGAGATACACC
ATTTTAACCTCATCAGCCGTCAGGAAGATTGGCATAGCAGCTGTGGTCAGGAGCTTTTTC
ATCTGCTGTCCGTTCATCTTCCTGGTATACCGACTTACATATTGTGGGAGAAACATCATT
CCTCATTCCTACTGTGAGCACATGGGCATTGCCAGATTGGCTTGTGGCAATATCAATGTC
AATATCATTTATGGCCTCACTGTGGCCCTACTCTCTACAGGACTGGATATAGTGCTTATC
ATTATATCCTACACAATGATCCTTCACGCAGTGTTTCAGATGTCTTCCTGGGCTGCCAGG
TTCAAGGCCCTTAGTACGTGCGGCTCTCATATCTGTGTCATATTTATGTTCTATACCCCA
GCATTCTTTTCATTTCTTGCCCATCGCTTTGGAGGTAAAACCATCCCTCACCACATTCAC
ATCCTAGTGGGCAGTCTCTATGTGTTAGTGCCCCCTATGCTAAACCCCATCATTTATGGG
GTGAAGACCAAACAAATTAAAGATCGAGTGATTTTGCTTTTCTCTCCTATCAGTGTATGC
TGT

ORF Protein

Cloned ORF protein sequence for pFN21AE0808 Download

>KIEE0808  281 aa
MYIVAVAGNIFLIFLIMTERSLHEPLYLFLSMLASANFLLAAAAAPEVLAILWFHSMDIS
FGSCVSQMFFIHFIFVAESAILLAMAFDRYVAICYPLRYTILTSSAVRKIGIAAVVRSFF
ICCPFIFLVYRLTYCGRNIIPHSYCEHMGIARLACGNINVNIIYGLTVALLSTGLDIVLI
IISYTMILHAVFQMSSWAARFKALSTCGSHICVIFMFYTPAFFSFLAHRFGGKTIPHHIH
ILVGSLYVLVPPMLNPIIYGVKTKQIKDRVILLFSPISVCC

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0808 Download

>pFN21AE0808  5548 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTACATTGTGGCTGTTGCAGGCAATATCTTCTT
GATCTTCCTGATCATGACTGAGCGCAGTCTCCATGAGCCCTTGTATCTCTTCCTATCCAT
GCTGGCCTCAGCCAACTTCCTGCTCGCCGCTGCTGCAGCCCCTGAGGTGCTGGCTATCCT
CTGGTTCCACTCCATGGACATATCCTTTGGTAGTTGTGTGTCTCAGATGTTCTTCATACA
TTTCATCTTTGTGGCAGAATCTGCTATTCTCCTGGCAATGGCATTTGACCGCTATGTGGC
CATCTGTTACCCACTGAGATACACCATTTTAACCTCATCAGCCGTCAGGAAGATTGGCAT
AGCAGCTGTGGTCAGGAGCTTTTTCATCTGCTGTCCGTTCATCTTCCTGGTATACCGACT
TACATATTGTGGGAGAAACATCATTCCTCATTCCTACTGTGAGCACATGGGCATTGCCAG
ATTGGCTTGTGGCAATATCAATGTCAATATCATTTATGGCCTCACTGTGGCCCTACTCTC
TACAGGACTGGATATAGTGCTTATCATTATATCCTACACAATGATCCTTCACGCAGTGTT
TCAGATGTCTTCCTGGGCTGCCAGGTTCAAGGCCCTTAGTACGTGCGGCTCTCATATCTG
TGTCATATTTATGTTCTATACCCCAGCATTCTTTTCATTTCTTGCCCATCGCTTTGGAGG
TAAAACCATCCCTCACCACATTCACATCCTAGTGGGCAGTCTCTATGTGTTAGTGCCCCC
TATGCTAAACCCCATCATTTATGGGGTGAAGACCAAACAAATTAAAGATCGAGTGATTTT
GCTTTTCTCTCCTATCAGTGTATGCTGTGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT