PACSIN1 ORF clone FHC01628

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC01628

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Clone info.

Species

human

Clone Name

pFN21ASDA1379 Sequence (with vector) Restriction Map

Product ID

FHC01628

Flexi Clone PID

FXC01628

ORF Sequence

DNA sequence (1332 bp)
Protein sequence (444 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384190]

Gene

KIAA1379

Symbol

PACSIN1

Alias : SDPI

Description

protein kinase C and casein kinase substrate in neurons 1, transcript variant 1

Original Clone ID

fj05092s1

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1332 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 444 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4793.1 4.4e-98 100.0 PACSIN1 CCDS54536.1 8.4e-69 68.4 PACSIN2 CCDS43023.1 7.5e-53 63.1 PACSIN2 CCDS31481.1 3.7e-40 51.7 PACSIN3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001452 388 398 PR00452 Src homology-3 domain IPR001452 402 417 PR00452 Src homology-3 domain IPR001452 432 444 PR00452 Src homology-3 domain HMMPfam IPR001060 17 105 PF00611 Fps/Fes/Fer/CIP4 homology IPR001452 391 438 PF00018 Src homology-3 domain HMMSmart IPR001060 17 105 SM00055 Fps/Fes/Fer/CIP4 homology IPR001452 388 444 SM00326 Src homology-3 domain ProfileScan IPR001060 13 76 PS50133 Fps/Fes/Fer/CIP4 homology IPR001452 385 444 PS50002 Src homology-3 domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_065855 444 606512 100.0 100.0 NP_001186512 444 606512 100.0 100.0 XP_011512843 444 606512 100.0 100.0 NP_001171900 445 604960 68.4 100.0 XP_005261376 445 604960 68.4 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDA1379 Download

>KIAA1379  1332 bp
ATGTCCAGCTCCTACGATGAGGCCTCACTGGCGCCAGAGGAGACCACCGACAGCTTCTGG
GAGGTGGGGAACTACAAGCGGACCGTGAAGCGCATCGATGACGGCCACCGTCTATGCAAC
GACCTGATGAACTGCGTGCAGGAGCGCGCCAAGATCGAGAAGGCGTACGGGCAGCAGCTC
ACCGACTGGGCCAAGCGTTGGCGCCAGCTCATCGAGAAAGGCCCACAGTATGGCAGCCTG
GAGCGGGCCTGGGGTGCCATAATGACAGAGGCAGACAAGGTGAGCGAGCTGCACCAGGAG
GTGAAGAACAATCTGCTGAATGAGGACCTGGAGAAGGTGAAGAACTGGCAGAAGGACGCC
TATCACAAGCAGATCATGGGTGGCTTCAAGGAGACGAAGGAGGCTGAAGATGGCTTCCGC
AAGGCCCAGAAGCCTTGGGCCAAGAAGATGAAGGAGCTGGAGGCAGCCAAGAAGGCCTAC
CATTTGGCTTGCAAAGAGGAAAAGCTGGCCATGACACGGGAGATGAACAGCAAGACGGAG
CAATCGGTCACACCTGAGCAGCAAAAGAAGCTGCAGGACAAAGTGGACAAGTGCAAGCAG
GATGTGCAGAAGACACAGGAGAAGTATGAGAAAGTGCTGGAAGATGTGGGCAAGACCACA
CCCCAGTACATGGAGAACATGGAGCAGGTGTTTGAGCAATGCCAGCAATTTGAGGAAAAG
CGGCTGGTCTTCCTCAAGGAGGTGCTGCTGGACATCAAACGGCACCTCAACCTGGCTGAG
AACAGCAGCTACATCCATGTGTACCGTGAGCTGGAGCAGGCCATCCGGGGGGCTGATGCC
CAGGAAGACCTCAGATGGTTCCGCAGCACCAGTGGCCCCGGCATGCCCATGAACTGGCCC
CAGTTTGAGGAGTGGAACCCAGACCTTCCTCACACCACCACCAAGAAGGAGAAACAGCCT
AAGAAGGCAGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGGTAGAGTCCACATCCCAG
GCTGGGGACCGCGGCAGTGTTAGCAGCTACGACAGAGGCCAGCCCTACGCCACCGAGTGG
TCAGACGACGAGAGTGGGAACCCCTTTGGGGGCAGTGAGACCAACGGGGGCGCCAACCCC
TTTGAGGACGACTCCAAGGGAGTGCGCGTGCGGGCACTCTACGACTATGACGGCCAGGAG
CAGGACGAGCTCAGCTTTAAGGCCGGAGACGAACTCACCAAGCTGGGCGAGGAGGATGAG
CAGGGCTGGTGCCGTGGGCGGCTGGACAGCGGGCAGCTGGGCCTCTACCCTGCCAACTAC
GTGGAGGCTATC

ORF Protein

Cloned ORF protein sequence for pFN21ASDA1379 Download

>KIAA1379  444 aa
MSSSYDEASLAPEETTDSFWEVGNYKRTVKRIDDGHRLCNDLMNCVQERAKIEKAYGQQL
TDWAKRWRQLIEKGPQYGSLERAWGAIMTEADKVSELHQEVKNNLLNEDLEKVKNWQKDA
YHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLACKEEKLAMTREMNSKTE
QSVTPEQQKKLQDKVDKCKQDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQQFEEK
RLVFLKEVLLDIKRHLNLAENSSYIHVYRELEQAIRGADAQEDLRWFRSTSGPGMPMNWP
QFEEWNPDLPHTTTKKEKQPKKAEGVALTNATGAVESTSQAGDRGSVSSYDRGQPYATEW
SDDESGNPFGGSETNGGANPFEDDSKGVRVRALYDYDGQEQDELSFKAGDELTKLGEEDE
QGWCRGRLDSGQLGLYPANYVEAI

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDA1379 Download

>pFN21ASDA1379  6061 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGTCCAGCTCCTACGA
TGAGGCCTCACTGGCGCCAGAGGAGACCACCGACAGCTTCTGGGAGGTGGGGAACTACAA
GCGGACCGTGAAGCGCATCGATGACGGCCACCGTCTATGCAACGACCTGATGAACTGCGT
GCAGGAGCGCGCCAAGATCGAGAAGGCGTACGGGCAGCAGCTCACCGACTGGGCCAAGCG
TTGGCGCCAGCTCATCGAGAAAGGCCCACAGTATGGCAGCCTGGAGCGGGCCTGGGGTGC
CATAATGACAGAGGCAGACAAGGTGAGCGAGCTGCACCAGGAGGTGAAGAACAATCTGCT
GAATGAGGACCTGGAGAAGGTGAAGAACTGGCAGAAGGACGCCTATCACAAGCAGATCAT
GGGTGGCTTCAAGGAGACGAAGGAGGCTGAAGATGGCTTCCGCAAGGCCCAGAAGCCTTG
GGCCAAGAAGATGAAGGAGCTGGAGGCAGCCAAGAAGGCCTACCATTTGGCTTGCAAAGA
GGAAAAGCTGGCCATGACACGGGAGATGAACAGCAAGACGGAGCAATCGGTCACACCTGA
GCAGCAAAAGAAGCTGCAGGACAAAGTGGACAAGTGCAAGCAGGATGTGCAGAAGACACA
GGAGAAGTATGAGAAAGTGCTGGAAGATGTGGGCAAGACCACACCCCAGTACATGGAGAA
CATGGAGCAGGTGTTTGAGCAATGCCAGCAATTTGAGGAAAAGCGGCTGGTCTTCCTCAA
GGAGGTGCTGCTGGACATCAAACGGCACCTCAACCTGGCTGAGAACAGCAGCTACATCCA
TGTGTACCGTGAGCTGGAGCAGGCCATCCGGGGGGCTGATGCCCAGGAAGACCTCAGATG
GTTCCGCAGCACCAGTGGCCCCGGCATGCCCATGAACTGGCCCCAGTTTGAGGAGTGGAA
CCCAGACCTTCCTCACACCACCACCAAGAAGGAGAAACAGCCTAAGAAGGCAGAGGGAGT
GGCGCTGACCAATGCCACTGGGGCGGTAGAGTCCACATCCCAGGCTGGGGACCGCGGCAG
TGTTAGCAGCTACGACAGAGGCCAGCCCTACGCCACCGAGTGGTCAGACGACGAGAGTGG
GAACCCCTTTGGGGGCAGTGAGACCAACGGGGGCGCCAACCCCTTTGAGGACGACTCCAA
GGGAGTGCGCGTGCGGGCACTCTACGACTATGACGGCCAGGAGCAGGACGAGCTCAGCTT
TAAGGCCGGAGACGAACTCACCAAGCTGGGCGAGGAGGATGAGCAGGGCTGGTGCCGTGG
GCGGCTGGACAGCGGGCAGCTGGGCCTCTACCCTGCCAACTACGTGGAGGCTATCTACGT
AGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T