GENSCAN 1.0	Date run:  3-Jul-120	Time: 20:38:00

Sequence gi568815585r:37464518_37698726 : 234209 bp : 35.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7177   7330  154  0  1   60   73    82 0.502   4.10
 1.02 Intr +   7411   7673  263  2  2   36   53   160 0.132   3.58
 1.03 Term +  20607  20756  150  2  0   81   43    85 0.090   0.23
 1.04 PlyA +  21497  21502    6                               1.05

 2.05 PlyA -  21571  21566    6                               1.05
 2.04 Term -  23308  23116  193  0  1   96   48   141 0.437   6.81
 2.03 Intr -  27199  27157   43  2  1   76  102   -10 0.239  -4.42
 2.02 Intr -  29563  29380  184  1  1   73   25   152 0.219   5.84
 2.01 Init -  30159  30139   21  0  0   99   84    25 0.516   2.99
 2.00 Prom -  31402  31363   40                              -3.95

 3.00 Prom +  38218  38257   40                              -1.45
 3.01 Init +  41620  41694   75  0  0   68   74     3 0.334  -1.96
 3.02 Intr +  41953  42026   74  0  2   97   88    95 0.644   7.69
 3.03 Intr +  47931  48012   82  0  1   71   56    54 0.420  -0.78
 3.04 Intr +  55039  55117   79  0  1   72   69    83 0.301   3.01
 3.05 Intr +  78972  79222  251  1  2    7    1   245 0.004   3.93
 3.06 Intr +  82959  83239  281  2  2   31   77   145 0.095   3.05
 3.07 Intr +  83317  83387   71  1  2  115   63    70 0.390   5.11
 3.08 Term +  85480  85844  365  2  2    8   32   224 0.112   2.54
 3.09 PlyA +  86831  86836    6                               1.05

 4.00 Prom +  93261  93300   40                              -1.35
 4.01 Sngl +  95916  96140  225  2  0   73   55   191 0.961   9.19
 4.02 PlyA +  96852  96857    6                               1.05

 5.22 PlyA -  98220  98215    6                               1.05
 5.21 Term - 102254 102136  119  0  2   45   44   135 0.913   2.52
 5.20 Intr - 104866 104783   84  2  0   42   88   113 0.977   5.57
 5.19 Intr - 105304 105227   78  2  0   87   82    60 0.937   3.90
 5.18 Intr - 106152 106063   90  1  0   83   68   100 0.989   6.55
 5.17 Intr - 106941 106852   90  1  0   57   92    84 0.956   4.75
 5.16 Intr - 110135 110055   81  0  0   76   93    37 0.758   1.69
 5.15 Intr - 114604 114502  103  1  1   79   72   124 0.983   8.73
 5.14 Intr - 114842 114712  131  0  2   60  100    41 0.962   1.99
 5.13 Intr - 115474 115344  131  0  2   50  102   106 0.522   7.62
 5.12 Intr - 116180 116044  137  2  2  114   87   121 0.999  13.05
 5.11 Intr - 117997 117849  149  2  2   82   98   144 0.999  13.83
 5.10 Intr - 119586 119452  135  1  0   78   84   140 0.999  12.22
 5.09 Intr - 120411 120199  213  1  0   86  107   139 0.995  13.36
 5.08 Intr - 121763 121622  142  2  1   63   63   173 0.984  11.31
 5.07 Intr - 122411 122265  147  2  0   40   89   156 0.998  10.41
 5.06 Intr - 123469 123305  165  1  0   61   98    88 0.956   6.34
 5.05 Intr - 125541 125522   20  1  2   57  115    -9 0.097  -5.89
 5.04 Intr - 126012 125884  129  1  0   53    1   128 0.058   0.35
 5.03 Intr - 127647 127583   65  2  2   96   98   -17 0.104  -2.46
 5.02 Intr - 132765 132667   99  2  0  116  111    89 0.849  12.31
 5.01 Init - 134209 134091  119  1  2   66  110    25 0.591   2.22
 5.00 Prom - 138900 138861   40                              -3.35

 6.00 Prom + 140396 140435   40                              -5.05
 6.01 Init + 142884 143341  458  2  2   75   53   173 0.069   7.82
 6.02 Intr + 157088 157157   70  2  1   97   50    54 0.059   0.77
 6.03 Term + 165215 165310   96  1  0   70   39   111 0.264   1.39
 6.04 PlyA + 166632 166637    6                               1.05

 7.09 PlyA - 167301 167296    6                               1.05
 7.08 Term - 173108 172386  723  2  0   43   43   612 0.998  44.69
 7.07 Intr - 174612 174523   90  0  0   38   86   154 0.491   9.47
 7.06 Intr - 174782 174741   42  2  0   73  108    30 0.329   1.02
 7.05 Intr - 186942 186748  195  0  0   82   78   140 0.888  11.09
 7.04 Intr - 190766 190571  196  1  1   79   87    36 0.453   1.10
 7.03 Intr - 199212 198899  314  0  2   98  111   127 0.789  10.06
 7.02 Intr - 209897 209711  187  1  1   71   88    52 0.009   2.27
 7.01 Intr - 227560 227482   79  2  1   76   34   118 0.017   2.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 142063 142605  543  0  0   79   41   187 0.815   8.94
S.002 Term + 216005 216128  124  2  1   70   44   124 0.886   3.08


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:37464518_37698726|GENSCAN_predicted_peptide_1|188_aa
MKPQTLVVSVTVLKDGVSGVCSFRCSDVSRVSPFWWVHGLADFRSEATDLCRVKLQTFAV
SVIAHKGGASGVVRSSDGFMVLLTSGVKPQTFAVSVTALKGGASRVICSSQWVGGLADFR
SEAADPAVLQLIKVVQTQTNNAAKLYRMESPQRQCLWREIQQLTGMGPPSSGQPIFVENH
TAYICGKP

>gi568815585r:37464518_37698726|GENSCAN_predicted_CDS_1|567_bp
atgaagccacagacactcgtggtgagtgttacagttcttaaagatggtgtgtccggcgtt
tgttccttcagatgttcagacgtgtccagagtttctcccttctggtgggttcatggtctt
gctgacttcagaagtgaagccacagacctctgcagagtgaagctgcagaccttcgcggtg
agtgttatagctcataaaggtggcgcgtctggagttgttcgttcctctgatgggttcatg
gtcttgctgacttcaggagtgaagccacagacctttgcagtgagtgttacagctcttaaa
ggtggtgcatccagagttatttgttcctcccagtgggttggtggtctcgctgacttcagg
agtgaagctgcagaccctgcggtgttacagctcataaaggtagtgcagacccaaacaaat
aatgcagcaaaattatacaggatggaatcccctcaaagacaatgcctctggagagagatc
cagcaacttacaggaatgggtccacctagttcagggcagcctatatttgtggaaaaccat
acagcctatatttgtggtaaaccataa

>gi568815585r:37464518_37698726|GENSCAN_predicted_peptide_2|146_aa
MVMEEGSKRVAQKEPHRTCSDTPNLNSEIIHLEKGIRGGQETKSVNSGDNSLHGKMKPEK
WRLSPNKPKASQGPVHHVLARQRQSLDTQEQRGPLEALGLPEFAIRKEESGPFSFIFHLT
GVMENHDWFPKWSLLGPVTVDGGWML

>gi568815585r:37464518_37698726|GENSCAN_predicted_CDS_2|441_bp
atggtgatggaagaaggaagtaaaagagtagctcagaaagagccgcacaggacatgctca
gatactcctaatcttaacagtgaaataattcatttggagaaaggaataagaggtgggcaa
gagaccaagagcgtcaactctggggacaattcactgcatggaaaaatgaaaccagagaag
tggagactttcccctaataagccaaaggcttcccagggccctgtccatcatgtcctggca
aggcaaaggcagtctcttgatacacaagagcaaagagggcctctggaagcactgggttta
ccagagtttgcaatcagaaaagaagaaagtggccctttctccttcatcttccacttgaca
ggtgtgatggagaaccatgactggttcccaaagtggtcacttcttggaccagtgactgta
gatgggggatggatgctgtga

>gi568815585r:37464518_37698726|GENSCAN_predicted_peptide_3|425_aa
MAERPIDGSHHRTLCRQPPIPAWSQNHTGSPAMDPNQEKIPDLPEKEFRRKIANQEAFHI
RSTKYHSHKSVYNMICKKLRFDCQLHAPSESDNSIVDLGTEPVDVVMEKNQPLSVDQCWL
QAIEFSVHLIDLLSILHRCNGFNGIQKAVEDQTGSRPPNSDHDLFLVQAWLWEVLSLELL
IRPTTELDPGFSSFPVGMGENLSSSTARAAAANSGMSRESRLQGLCMCLSGSSAQTPHSS
LCWSGAPGWELTGHLLSSGLQRSMEELWVSRDSYSFIIFPWSSCFLDESQCVYRDVPVED
LVIKVQKGNVGWEPPHSVPIGVLPCGAVRRRPPSSRSRNGRSIESLNCAPKEATDTQCQP
RKAARREAVPCKATGAELSEAVGAHLLYQHDLDVKHGVKGDHFGALRFDCPTGFWTCMGP
AAPLF

>gi568815585r:37464518_37698726|GENSCAN_predicted_CDS_3|1278_bp
atggctgagagacccatagatggttcacatcacaggactctgtgcagacaacccccaata
ccagcctggagccagaatcacactggttcaccagcaatggatccaaaccaagaaaaaatt
cctgatttacctgaaaaagaattcaggagaaaaattgctaaccaagaagctttccacatt
agaagcacaaagtaccattcacataagtcagtctataacatgatctgcaaaaagttacgt
tttgattgccagcttcatgccccatctgaaagtgataacagtattgtagacctaggcact
gaaccagtggatgttgtcatggaaaagaatcagcccctttctgttgaccagtgctggctg
caggcgatagagttttcagtgcatctcatcgatttactgagcatacttcacagatgtaat
ggtttcaatgggattcagaaagctgtagaagatcagactggcagcagaccaccaaacagt
gaccatgacctctttttggtgcaagcttggctttgggaagttctttctttggagcttctt
atccgtccaaccactgagctggaccctggatttagttcctttcctgtgggcatgggagag
aacctgtcctcctccacagccagagctgctgctgctaattctgggatgtccagggaatca
aggctccagggactctgcatgtgcctgagcggcagctctgcccagactccccatagctct
ctgtgttggtctggagcccctggttgggagctcactgggcatctcctgagttcagggttg
caaaggtccatggaagaattgtgggtctccagggactcttactcattcatcattttccca
tggtcgagttgtttccttgatgaatcccaatgtgtctaccgagatgttccagttgaagat
ctagtaattaaagtgcagaagggaaatgtagggtgggagcctccacacagtgtccctatt
ggggtacttccttgtggagctgtgagaagaaggccaccatcctccagatcccggaatggt
agatccattgaaagcttgaactgtgcacctaaagaagccacagacactcaatgccagccc
aggaaagcggccaggagggaggctgtaccctgcaaagccacaggggcagagctgtccgag
gctgtgggagcccacctcctgtatcagcatgacctggatgtgaaacatggagtcaaagga
gatcattttggagctttaagatttgactgccccactggattttggacttgcatgggtcct
gcagcccctttgttttaa

>gi568815585r:37464518_37698726|GENSCAN_predicted_peptide_4|74_aa
MAPSYWETRRGPGPGHFNEGSPRPGHNSISGVSFRRLIDSLSPGTPRSTELDLPVRERVA
LVGGDKPTKIHTDI

>gi568815585r:37464518_37698726|GENSCAN_predicted_CDS_4|225_bp
atggcaccctcctattgggaaacgagaagggggcctggacccggacacttcaatgagggc
agtccacgtccaggccacaactccatttcaggggtgagtttccggaggctcattgattcc
ctctccccaggaacacctagaagcacagaattagatctcccagtcagagaacgggttgca
ttagttggaggagacaaacccaccaagattcacactgacatttga

>gi568815585r:37464518_37698726|GENSCAN_predicted_peptide_5|808_aa
MIPFLPMFSLLLLLIVNPINANNHYDKILAHSRIRGRDQGPNVCALQQILGTKKKYFSTC
KNWYKKSICGQKTTVLYECCPGYMRMEGMKGCPAVLPIDHVYGTLGIVGATTTQRYSDAS
KLREEIEGKGSFTYFAPNNMSNRKDIRRGLESNVNVELLNALHSHMINKRMLTKDLKNGM
IIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEA
EDDLSSFRAAAITSDILEALGRDGHFTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKY
HILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQ
VLIPDSAKQVIELAGKQQTTFTDLVAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQR
LLKLILQNHILKVKVGLNELYNGQILETIGGKQLRVFVYRTAVCIENSCMEKGSKQGRNG
AIHIFREIIKPAEKSLHEKLKQDKRFSTFLSLLEAADLKELLTQPGDWTLFVPTNDAFKG
MTSEEKEILIRDKNALQNIILYHLTPGVFIGKGFEPGVTNILKTTQGSKIFLKEVNDTLL
VNELKSKESDIMTTNGVIHVVDKLLYPAATKIITKVVEPKIKVIEGSLQPIIKTEGPTLT
KVKIEGEPEFRLIKEGETITEVIHGEPIIKKYTKIIDGVPVEITEKETREERIITGPEIK
YTRISTGGGETEETLKKLLQEEVTKVTKFIEGGDGHLFEDEEIKRLLQGELCILKRLKQL
KENNRLCRKEQQQKVIFEGFRKSANIRG

>gi568815585r:37464518_37698726|GENSCAN_predicted_CDS_5|2427_bp
atgattccctttttacccatgttttctctactattgctgcttattgttaaccctataaac
gccaacaatcattatgacaagatcttggctcatagtcgtatcaggggtcgggaccaaggc
ccaaatgtctgtgcccttcaacagattttgggcaccaaaaagaaatacttcagcacttgt
aagaactggtataaaaagtccatctgtggacagaaaacgactgtgttatatgaatgttgc
cctggttatatgagaatggaaggaatgaaaggctgcccagcagttttgcccattgaccat
gtttatggcactctgggcatcgtgggagccaccacaacgcagcgctattctgacgcctca
aaactgagggaggagatcgagggaaagggatccttcacttactttgcaccgaataacatg
tctaacagaaaggatatccgtagaggtttggagagcaacgtgaatgttgaattactgaat
gctttacatagtcacatgattaataagagaatgttgaccaaggacttaaaaaatggcatg
attattccttcaatgtataacaatttggggcttttcattaaccattatcctaatggggtt
gtcactgttaattgtgctcgaatcatccatgggaaccagattgcaacaaatggtgttgtc
catgtcattgaccgtgtgcttacacaaattggtacctcaattcaagacttcattgaagca
gaagatgacctttcatcttttagagcagctgccatcacatcggacatattggaggccctt
ggaagagacggtcacttcacactctttgctcccaccaatgaggcttttgagaaacttcca
cgaggtgtcctagaaaggatcatgggagacaaagtggcttccgaagctcttatgaagtac
cacatcttaaatactctccagtgttctgagtctattatgggaggagcagtctttgagacg
ctggaaggaaatacaattgagataggatgtgacggtgacagtataacagtaaatggaatc
aaaatggtgaacaaaaaggatattgtgacaaataatggtgtgatccatttgattgatcag
gtcctaattcctgattctgccaaacaagttattgagctggctggaaaacagcaaaccacc
ttcacggatcttgtggcccaattaggcttggcatctgctctgaggccagatggagaatac
actttgctggcacctgtgaataatgcattttctgatgatactctcagcatggatcagcgc
ctccttaaattaattctgcagaatcacatattgaaagtaaaagttggccttaatgagctt
tacaacgggcaaatactggaaaccatcggaggcaaacagctcagagtcttcgtatatcgt
acagctgtctgcattgaaaattcatgcatggagaaagggagtaagcaagggagaaacggt
gcgattcacatattccgcgagatcatcaagccagcagagaaatccctccatgaaaagtta
aaacaagataagcgctttagcaccttcctcagcctacttgaagctgcagacttgaaagag
ctcctgacacaacctggagactggacattatttgtgccaaccaatgatgcttttaaggga
atgactagtgaagaaaaagaaattctgatacgggacaaaaatgctcttcaaaacatcatt
ctttatcacctgacaccaggagttttcattggaaaaggatttgaacctggtgttactaac
attttaaagaccacacaaggaagcaaaatctttctgaaagaagtaaatgatacacttctg
gtgaatgaattgaaatcaaaagaatctgacatcatgacaacaaatggtgtaattcatgtt
gtagataaactcctctatccagcagcaactaaaattataaccaaagttgtggaaccaaaa
attaaagtgattgaaggcagtcttcagcctattatcaaaactgaaggacccacactaaca
aaagtcaaaattgaaggtgaacctgaattcagactgattaaagaaggtgaaacaataact
gaagtgatccatggagagccaattattaaaaaatacaccaaaatcattgatggagtgcct
gtggaaataactgaaaaagagacacgagaagaacgaatcattacaggtcctgaaataaaa
tacactaggatttctactggaggtggagaaacagaagaaactctgaagaaattgttacaa
gaagaggtcaccaaggtcaccaaattcattgaaggtggtgatggtcatttatttgaagat
gaagaaattaaaagactgcttcagggagaattatgcattctgaaacgactcaagcaatta
aaggagaataacagactatgtcgaaaggaacaacaacaaaaagtcatttttgaaggtttt
cgcaaatctgccaacataagaggttaa

>gi568815585r:37464518_37698726|GENSCAN_predicted_peptide_6|207_aa
MEENLGNTIQDIDMGKDLMTKAPKAMATKAKIDKWDLIKLKSFCTAKETIIRVNRQPTEW
EKSFAIYPSDKGLIFRTYKELKQINKKKTNNPIKKWVKDMNRHFSKEDIYAANKHMKKSP
SSLLIRETQIKTTMRYHLRPVRMAIVKKSGNNRIPTSKKALARCNPLTLDFSASIITEST
PGEDAVRIVKITTKDLDDYLNLVAEAA

>gi568815585r:37464518_37698726|GENSCAN_predicted_CDS_6|624_bp
atggaagaaaacctaggcaataccattcaggacatagatatgggcaaagacctcatgact
aaagcaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaacta
aagagcttctgcacagcaaaagaaactatcatcagagtgaacaggcaacctacagaatgg
gaaaaaagttttgccatctatccatctgacaaagggctaatatttagaacctacaaggaa
cttaaacaaattaacaagaaaaaaacaaacaaccccatcaaaaagtgggtgaaggatatg
aacagacacttttcaaaagaagacatttatgcggccaacaaacatatgaaaaaaagccca
tcatcactgctcattagagaaacgcaaatcaaaaccacaatgagataccatctcaggcca
gttagaatggcgattgttaaaaagtcaggaaacaacagaatccccaccagcaaaaaggct
ctcgccagatgcaaccccttgaccttggacttctcagcttccataattacagaatctact
cctggtgaagatgctgtgaggattgttaaaataactacaaaggatttagatgattattta
aacttagttgctgaagctgcgtag

>gi568815585r:37464518_37698726|GENSCAN_predicted_peptide_7|608_aa
XHRQVRLEQARSTTNHRRVDDITVGPGDSIEIILTMNLSIIAGFIWGEIKQMWDGGLQDY
IHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEALFAIANIFSS
LRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLTC
KGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATMFGTYNVISL
VVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYL
IKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAAMIRDAKTEE
GLTEENFKELKQDISSFRFEVLGLLRGSKLSTIQSANASKESSNSADSDEKSDSEGNSKD
KKKNFSLFDLTTLIHPRSAAIASERHNISNGSALVVQEPPREKQRKVNFVTDIKNFGLFH
RRSKQNAAEQNANQIFSVSEEVARQQAAGPLERNIQLESRGLASRGDLSIPGLSEQCVLV
DHRERNTDTLGLQVGKRVCPFKSEKVVVEDTVPIIPKEKHAKEEDSSIDYDLNLPDTVTH
EDYVTTRL

>gi568815585r:37464518_37698726|GENSCAN_predicted_CDS_7|1827_bp
ncacatcgacaggtcagacttgaacaggcaaggtccaccaccaaccatcgtcgagtggat
gatattaccgtgggtcctggtgattctattgaaatcatacttacaatgaatctttctata
attgcaggcttcatatggggagaaattaaacagatgtgggatggcggacttcaggactac
atccatgattggtggaatctaatggactttgtaatgaactccttatatttagcaacaatc
tccttgaaaattgttgcatttgtaaagtacagtgcccttaatccacgagaatcatgggac
atgtggcatcccactctggtggcagaggctttatttgctattgcaaacatcttcagttct
ctgcgtctgatctcactgtttactgcaaattctcacctgggacctctgcaaatatctctg
ggaagaatgctcctggacattttgaagtttctattcatatactgccttgtgttgctagca
tttgcaaatggcctaaatcaattgtacttctattatgaagaaacgaaagggttaacctgc
aaaggcataagatgtgaaaagcagaataatgcattttcaacgttatttgagacactgcag
tccctgttttggtcaatatttgggctcatcaatttatatgtgaccaatgtcaaagcacag
catgaatttactgagtttgttggtgccaccatgtttgggacatacaatgtcatctctctg
gttgttctactcaacatgttaatagctatgatgaataattcttaccaactgattgctgac
catgcagatatagaatggaaatttgcacgaacaaagctttggatgagttattttgaagaa
ggaggtactctgcctactcccttcaatgtcatcccgagccccaagtctctctggtacctg
atcaaatggatctggacacacttgtgcaagaaaaagatgagaagaaagccagaaagtttt
ggaacaatagggaggcgagctgctgataacttgagaagacatcaccaataccaagaagtt
atgaggaacctggtgaagcgatacgttgctgcaatgattagagatgctaaaactgaagaa
ggcctgaccgaagagaactttaaggaactaaagcaagacatttctagtttccgctttgaa
gtcctgggattactaagaggaagcaaactttccacaatacaatctgcgaatgcctcgaag
gagtcttcaaattcggcagactcagatgaaaagagtgatagcgaaggtaatagcaaggac
aagaaaaagaatttcagcctttttgatttaaccaccctgattcatccgagatcagcagca
attgcctctgaaagacataacataagcaatggctctgccctggtggttcaggagccgccc
agggagaagcagagaaaagtgaattttgtgaccgatatcaaaaactttgggttatttcat
agacgatcaaaacaaaatgctgctgagcaaaatgcaaaccaaatcttctctgtttcagaa
gaagttgctcgtcaacaggctgcaggaccacttgagagaaatattcaactggaatctcga
ggattagcttcacggggtgacctgagcattcccggtctcagtgaacaatgtgtgttagta
gaccatagagaaaggaatacggacacactggggttacaggtaggaaagagagtgtgtcca
ttcaagtcagagaaggtggtggtggaggacacggttcctataataccaaaggagaaacat
gcaaaagaagaggactctagtatagactatgatctaaacctcccagacacagtcacccac
gaagattacgtgaccacaagattgtga