GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:23:30

Sequence gi568815595f:15327780_15539152 : 211373 bp : 44.83% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   2587   2582    6                               1.05
 1.02 Term -   2787   2689   99  0  0  111   41   121 0.649   7.83
 1.01 Init -   4629   4492  138  0  0   70   91   286 0.257  25.24
 1.00 Prom -  13640  13601   40                              -4.26

 2.00 Prom +  20356  20395   40                              -3.36
 2.01 Init +  24205  24252   48  0  0   77   78    57 0.504   4.72
 2.02 Term +  44947  45087  141  0  0   66   44   152 0.826   6.53
 2.03 PlyA +  45104  45109    6                              -0.45

 3.03 PlyA -  46323  46318    6                               1.05
 3.02 Term -  47905  47594  312  1  0   42   45   409 0.310  27.00
 3.01 Init -  59220  59218    3  0  0  108   81     0 0.405   1.30
 3.00 Prom -  64204  64165   40                              -2.46

 4.02 PlyA -  64965  64960    6                               1.05
 4.01 Sngl -  68831  68442  390  2  0   88   54   284 0.951  21.22
 4.00 Prom -  78646  78607   40                              -4.96

 5.05 PlyA -  79244  79239    6                               1.05
 5.04 Term -  83658  83477  182  1  2   71   43   107 0.804   2.27
 5.03 Intr -  86383  86242  142  1  1   79   95    22 0.889   1.93
 5.02 Intr -  88163  87993  171  2  0   95   96   101 0.982  11.74
 5.01 Init -  96233  96168   66  2  0   79   80    25 0.239  -0.13
 5.00 Prom -  97783  97744   40                              -5.56

 6.00 Prom +  98629  98668   40                              -4.36
 6.01 Init +  99734  99863  130  1  1   64   63    48 0.453  -0.40
 6.02 Intr +  99897 100103  207  1  0   91   81   154 0.527  14.05
 6.03 Intr + 102134 102228   95  0  2  114   76    53 0.997   6.38
 6.04 Intr + 104308 104444  137  0  2   39   95   120 0.966   7.17
 6.05 Intr + 106569 106759  191  0  2  121   65   172 0.999  17.43
 6.06 Intr + 108563 108796  234  0  0   80   89   209 0.993  17.86
 6.07 Term + 112784 112812   29  0  2  115   43    -7 0.240  -4.26
 6.08 PlyA + 114810 114815    6                               1.05

 7.15 PlyA - 115615 115610    6                               1.05
 7.14 Term - 123934 123865   70  0  1   81   55   170 0.888  10.41
 7.13 Intr - 126152 126050  103  0  1  106   45   143 0.998  11.03
 7.12 Intr - 128240 128120  121  2  1   67   75    96 0.954   6.27
 7.11 Intr - 128800 128681  120  1  0   49   80   152 0.878  11.19
 7.10 Intr - 130546 130407  140  2  2   74   79    50 0.648   2.88
 7.09 Intr - 138658 138562   97  1  1   91  110    34 0.852   5.48
 7.08 Intr - 142837 142757   81  1  0  133  110    63 0.993  12.83
 7.07 Intr - 146256 146221   36  0  0   91  106     6 0.653   1.16
 7.06 Intr - 146493 146449   45  0  0  106   90    37 0.922   4.31
 7.05 Intr - 147172 147146   27  1  0  109   96    -1 0.662   1.11
 7.04 Intr - 147708 147646   63  0  0   83   86    48 0.831   3.01
 7.03 Intr - 149418 149347   72  0  0   70  110     1 0.472   0.10
 7.02 Intr - 151224 151179   46  2  1  111   65    43 0.866   2.71
 7.01 Init - 154219 153816  404  1  2   60   39   173 0.501   5.70
 7.00 Prom - 156142 156103   40                              -4.96

 8.12 PlyA - 156268 156263    6                              -0.45
 8.11 Term - 156968 156481  488  0  2   17   38   297 0.980  12.46
 8.10 Intr - 157421 157259  163  2  1   80   71    47 0.974   1.75
 8.09 Intr - 159991 159833  159  1  0   51   85    45 0.458   0.68
 8.08 Intr - 160528 160427  102  1  0   48   77    57 0.171   0.97
 8.07 Intr - 161858 161746  113  0  2   34  117    54 0.235   3.00
 8.06 Intr - 165817 165647  171  2  0    0  100    82 0.138   0.51
 8.05 Intr - 171363 171250  114  1  0   56   48    83 0.093   1.52
 8.04 Intr - 173228 173105  124  2  1   62   79    39 0.059   0.56
 8.03 Intr - 184057 183916  142  0  1   74   94    47 0.685   4.26
 8.02 Intr - 185489 185296  194  2  2   35   63   104 0.330   0.89
 8.01 Init - 208276 208217   60  1  0   80   93    22 0.484   3.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:15327780_15539152|GENSCAN_predicted_peptide_1|78_aa
MDAALKRSRSEEPAEILPPARDEEEEEEEGMEQGLEEEEEVDPRIQGELEKLNQSTDDIN
RRETELEVQRAEFLFLVK

>gi568815595f:15327780_15539152|GENSCAN_predicted_CDS_1|237_bp
atggacgcggcactgaagcggagccgctcggaggagccagccgaaatcctgccgcctgcc
cgggacgaggaggaggaggaggaagaggggatggagcaggggctggaggaggaagaagag
gtggatccccggatccagggagaactggagaagttaaatcagtccacggatgatatcaac
agacgggagactgaacttgaggtacagagagctgagttcctgttcttggtgaagtga

>gi568815595f:15327780_15539152|GENSCAN_predicted_peptide_2|62_aa
MVDALAACTLYLEKPQAAKSPPVHAIETATRAIGALTYPEPPLLPSPQYPTIARPTIAYY
TY

>gi568815595f:15327780_15539152|GENSCAN_predicted_CDS_2|189_bp
atggtggatgcactggcagcttgcaccctgtacctggaaaagccacaggcagccaagagc
ccacctgttcatgctattgaaacagccaccagagccattggggcccttacttacccagag
ccacccctgctgccctcgccccagtaccctaccattgcaaggcccacaattgcctactat
acctactga

>gi568815595f:15327780_15539152|GENSCAN_predicted_peptide_3|104_aa
MHLRPAAVAIAAATMPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKASA
KKGEKVPKGKKGKADAGKEGNNPAENGDAKTDQSQKAEGAGDAK

>gi568815595f:15327780_15539152|GENSCAN_predicted_CDS_3|315_bp
atgcacctacgtcccgccgccgtcgccatcgccgcggccaccatgcccaagagaaaggct
gaaggagatgctaaaggagataaagccaaggtgaaggacgaaccgcagagaagatccgct
aggttgtctgctaaacctgctcctccaaagccagagcccaagcctaaaaaggcctctgca
aagaagggagagaaggtacccaaagggaaaaagggaaaggctgatgctggcaaggagggg
aataaccctgcagaaaatggagatgccaaaacagaccagtcacagaaagctgaaggtgct
ggagatgccaagtga

>gi568815595f:15327780_15539152|GENSCAN_predicted_peptide_4|129_aa
MGKKQSRKTENSKNQSASPPPKERSSSPAMEQSWTENDFDELREEGFRQSNYSELKEEVR
THGKEVKNLEKRLDEWLTRITSVEKPLNDLMELKTMAQELRDKCTSLSSRFNQLEERVSV
MEDQMNEMK

>gi568815595f:15327780_15539152|GENSCAN_predicted_CDS_4|390_bp
atggggaaaaaacagagcagaaaaactgaaaattctaaaaatcagagcgcctctcctcct
ccaaaggaacgcagctcctcaccagcaatggaacaaagctggacggagaatgactttgat
gagttgagagaagaaggcttcagacaatcaaactactctgagctaaaggaggaagttcga
acccatggcaaagaagttaaaaaccttgaaaaaagattagacgaatggctaactagaata
accagcgtagagaagcccttaaatgacctgatggagctgaaaaccatggcacaagaacta
cgtgacaaatgcacaagcctcagtagccgattcaatcaactggaagaaagggtatcagtg
atggaagatcaaatgaatgaaatgaaatga

>gi568815595f:15327780_15539152|GENSCAN_predicted_peptide_5|186_aa
MVSNSWAQVINLPQPPKMLGLQQNPLYDTERCKVFQCDLTKDDLLDHVPPESVDVVMLIF
VLSAVHPDKMHLVLQNIYKVLKPGKSVLFRDYGLYDHAMLRFKASSKLGENFYVRQDGTR
SYFFTDDFLAQLFMDTGYEEVVNEYVFRETVNKKEGLCVPRVFLQSKFLKPPKNPSPVVL
GLDPKS

>gi568815595f:15327780_15539152|GENSCAN_predicted_CDS_5|561_bp
atggtctcaaactcctgggctcaggtgatcaacctgcctcagcctcccaaaatgctggga
ttacagcaaaatcctttatatgatacagaaagatgcaaggtattccagtgtgatctgact
aaagatgatcttctggatcatgtaccgccagagtctgtggatgttgttatgttgatattt
gtgctgtcagctgttcatcctgataagatgcaccttgtcttacaaaacatttacaaggta
ttaaaaccaggcaaaagtgtcttgtttcgtgactacggactgtatgatcatgccatgctt
aggtttaaagccagcagcaaacttggagaaaacttttatgttagacaagatgggaccaga
tcatatttttttactgatgacttcctggctcagctctttatggacacaggttatgaagaa
gtggtaaacgagtatgtgtttcgagagacggtgaataaaaaagaaggcctgtgtgtgcca
agagttttccttcagagcaaatttctaaagcctcctaagaacccatctcctgtggtcctg
ggcctggatcctaagtcctga

>gi568815595f:15327780_15539152|GENSCAN_predicted_peptide_6|340_aa
MAPPPPLPLGTRKFLPDAGSPTALPPQIPLSPPRRGENLLLDPERWPGSTVLPDASARSS
DRGCTGRAPIWVRGRCGAMNGTANPLLDREEHCLRLGESFEKRPRASFHTIRYDFKPASI
DTSCEGELQVGKGDEVTITLPHIPGSTPPMTVFKGNKRPYQKDCVLIINHDTGEYVLEKL
SSSIQVKKTRAEGSSKIQARMEQQPTRPPQTSQPPPPPPPMPFRAPTKPPVGPKTSPLKD
NPSPEPQLDDIKRELRAEVDIIEQMSSSSGSSSSDSESSSGSDDDSSSSGGEDNGPASPP
QPSHQQPYNSRPAVANGTSRPQGSNQLMNTLTSGGEAVWT

>gi568815595f:15327780_15539152|GENSCAN_predicted_CDS_6|1023_bp
atggcaccgcccccgccacttccgctaggaacccggaagttcctacccgacgccggaagt
cccacggccttgcctcctcagattcctctctcacccccacgcagaggagagaacttgctt
ctggacccggagcggtggcccggaagcacagtcctcccagacgccagcgccagaagctcg
gatcgcggctgcaccgggagagcgccgatctgggtgcgaggcaggtgcggggccatgaat
gggaccgcaaacccgctgctggaccgcgaggaacattgcctgaggctcggggagagcttc
gagaagcggccgcgggcctccttccacactattcgttatgattttaaaccagcatctata
gacacttcctgtgaaggagagcttcaagttggcaaaggagatgaagtcacaattacactg
ccacatatccctggatccacaccacccatgactgtgttcaaggggaacaaacggccttac
cagaaagactgtgtgcttattattaatcatgacactggtgaatatgtgctggaaaaactc
agtagcagcattcaggtgaagaaaacaagagctgagggcagcagtaaaatccaggcccga
atggaacagcagcccactcgtcctccacagacgtcacagccaccaccacctccaccacct
atgccattcagagctccaacgaagcctccagttggacccaaaacttctcccttgaaagat
aacccctcacctgaacctcagttggatgacatcaaaagagagctgagggctgaagttgac
attattgaacaaatgagcagcagcagtgggagcagctcttcagactctgagagctcttcg
ggaagtgatgacgatagctccagcagtggaggcgaggacaatggcccagcctctcctccg
cagccttcacaccagcagccctacaacagtaggcctgccgttgccaatggaaccagccgg
ccacaaggaagcaaccagctcatgaacaccctcactagtggaggggaagcagtctggact
tag

>gi568815595f:15327780_15539152|GENSCAN_predicted_peptide_7|474_aa
MSELPFTIASKRIKYLGIKLTRDVKDLFKENCKPLLNEMKENRNKWKNIPCSWIGRINIV
KMAILPKVIYRFSAIPIKLPMTFFTELEKTTLNFIWNQKRDHIAKTILSQKKKAGGITLP
DFKLYYKATVTKTAWGSLADQEGRYGLRCSGRPGPPGVPGMPGPIGWPGPEGPRGEKGDL
GMMGLPGSRGPMGSKGYPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEP
GIAGHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGE
RGFPGPPGRCLCGPTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRR
DQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCH
RAYCGDGHRHEGVEDCDGSDFGYLTCETYLPGSYGDLQCTQYCYIDSTPCRYFT

>gi568815595f:15327780_15539152|GENSCAN_predicted_CDS_7|1425_bp
atgagtgagctcccattcacaattgcttcaaagagaataaaatacctaggaatcaaactt
acaagggatgtgaaggacctcttcaaggagaactgcaaaccactgctcaatgaaatgaaa
gagaacagaaacaaatggaagaacattccatgctcatggataggaagaatcaatattgtg
aaaatggccatactgcccaaggtaatttatagattcagtgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaacttcatatggaaccaaaaaaga
gaccacattgccaagacaatcttaagccaaaagaagaaagctggaggcatcacactacct
gacttcaaactatactacaaggctacagtaaccaagacagcatgggggagcttggccgac
caggaaggaaggtatggtctgcgctgttctggtagacctggccccccaggtgttcctggc
atgcctgggcccatcggttggccaggccctgaaggacccaggggtgaaaaaggtgacctg
ggtatgatgggcttgccagggtcaagaggaccaatgggctccaagggctaccctggatcc
agaggggaaaagggatccagaggtgaaaagggtgacctgggtcccaaaggagaaaagggt
ttcccaggatttcctggaatgttggggcagaaaggtgaaatgggtccaaaaggtgaacct
gggatagcaggacaccgaggacccacaggaagaccaggaaaacgaggcaagcagggacag
aaaggggatagtggagttatgggcccaccaggcaagcctgggccttctggtcaacctggc
cgtccggggcccccaggccccccacctgcaggacaacttataatgggacccaaaggggaa
agaggatttcccgggcctccaggaagatgtctttgtggacccactatgaatgtgaataac
ccttcctacggggaatctgtgtatgggcccagttccccgcgagttcctgtgatttttgtg
gtcaacaaccaggaggagcttgagaggctgaacacccaaaacgccattgccttccgcaga
gaccagagatctctgtacttcaaggacagccttggctggctccccatccagctgacccct
ttctaccctgtggattacactgcagaccagcacggcacctgtggggatgggctcctgcag
cctggggaggagtgtgacgacggtaacagcgatgtgggtgacgactgcatccgctgtcac
cgtgcctactgtggagatggtcaccggcatgagggtgtggaggactgtgacggctctgac
tttggctacctgacatgcgagacctatctccctgggtcatatggagacctgcaatgcacc
cagtactgctacatcgactccacgccctgccgctacttcacctga

>gi568815595f:15327780_15539152|GENSCAN_predicted_peptide_8|609_aa
MKPYKEVQVSEILQPQLTLQFLASIASLDSNSYSSAALPCRDAEVGIQRAMEPPLKTLKL
PFIEYFLVTRLLTHIIFNLHNNVTRASLASETVLTGVDLMEWPPKGFQILCGHLEMKFST
TEHSVQELGRLQESQTLRDAKVGKGLELIWSKAFIVHLEKSRPTGEMGCPRSHITFSFVS
NTLAQTGLELRPLAMKVFPEAEEGRLPLDGLDPQGDVPDKADGGGKRGEARLGQPSWRDG
REDAKEDGMDQMHRKKHKRGDGGQGIEEALPSLDQKKRGGHKACCLLTPPPPPLFPPPFF
RGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQVLLPSSPPLPTKAKGETVKM
LQKGFLDKQEYPPETPPHRVLAPLACLQEGAPSPPLVIPRQTGSGVDLQQTPTDLQQRVL
TVRRKTNKQKGHLHQNPICTSPSSKTKARELHNTCTSFSSQFNHVEERVSVIEDQMNEMK
REEKFREKRVRRNEQSLQEIWDYVKRPNLRLIGVPESDGENGIKLENTLQDIIQEYFPNL
ARQANIQIEEIQRTPQRYSSRRACLSRVPEGSTKHGKEQLVPATTKSYQTVKTINTMKKL
HQLMSKITS

>gi568815595f:15327780_15539152|GENSCAN_predicted_CDS_8|1830_bp
atgaagccctataaagaagtccaggtttctgaaatcctccagccccagctaactcttcag
ttccttgcctccatcgcctctctggacagtaacagttatagctcagcagcccttccctgt
cgggatgcagaagttgggatccagcgggccatggaaccaccactaaaaacactaaagtta
cctttcattgagtattttctggtcaccagactcttgacacatattatatttaatcttcac
aacaatgtcacaagggccagcttggcttctgagaccgtccttactggggtggacctcatg
gagtggcccccaaaaggtttccagattctctgtggtcatctggaaatgaaattctcaacc
actgagcacagtgtccaggaattagggaggctccaggaatcacagaccctgagagatgcc
aaagttggaaagggcttagagctcatctggtccaaggctttcattgtacatctagaaaaa
tccagacccacaggggaaatgggttgtcctaggtcacacattacgtttagctttgtcagc
aacactttggcccagacaggattagagctgagacccctggccatgaaggtcttccctgaa
gcagaggagggcaggctccccttggacggtctcgacccacaaggggatgttccagacaaa
gcagatgggggaggtaaaagaggtgaggcaagactgggtcagccgtcatggagagatggg
cgtgaagacgccaaagaggatggaatggatcagatgcacagaaagaagcataaaagggga
gatgggggacaggggatcgaggaagcccttcccagcctggatcagaagaagcgtggtggc
cacaaagcatgctgcctgctgacgcctcctccaccaccactgttcccaccaccattcttc
agaggtggccgaagtccgcttctctccccagacatgaagaatctcatgctggaactggag
acctcgcagtccccgtgcatgcaaggctcgctaggctcccctgggcctcccggcccccag
gtattgctaccaagcagcccacccctccccaccaaagctaaaggggaaacagtcaaaatg
ctgcagaaaggatttctagacaaacaagagtaccctccagagaccccaccccacagagtc
ctggcccctctggcctgcctccaagagggtgctccatcgcctccactggtgatacccagg
caaacagggtctggagtggacctccagcaaactccaacagacctgcagcagagggtcctg
actgttagaaggaaaactaacaaacagaaaggacatctacaccaaaatcccatctgtaca
tcaccatcatcaaagaccaaagcacgagaactacacaacacatgcacaagcttcagtagc
caattcaatcatgtggaagaaagggtatcagtgattgaagatcaaatgaatgaaatgaag
cgagaagagaagtttagagaaaaaagagtaagaagaaatgaacaaagcctccaagaaata
tgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgacggggag
aatggaatcaagttggaaaacactcttcaggatattatccaggagtacttccccaaccta
gcaaggcaggccaacattcaaattgaggaaatacagagaacgccacaaagatactcctca
agaagagcctgcctttcaagagttcctgaaggaagcactaaacatggaaaggaacaactg
gtaccagccaccacaaaatcataccaaacggtaaagaccatcaacaccatgaagaaactg
catcaactaatgagcaaaataacaagctaa