GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:30:25

Sequence gi568815596f:100370489_100582312 : 211824 bp : 43.46% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10717  10805   89  2  2   82   97    51 0.125   5.09
 1.02 Intr +  14886  14961   76  2  1   26  116    33 0.029  -1.01
 1.03 Term +  19680  19699   20  1  2  102   50    27 0.050  -1.22
 1.04 PlyA +  20463  20468    6                               1.05

 2.10 PlyA -  21396  21391    6                               1.05
 2.09 Term -  23294  22757  538  1  1  113   38   557 0.817  46.92
 2.08 Intr -  25126  25021  106  2  1  104   81   196 0.924  19.77
 2.07 Intr -  27654  27420  235  0  1   94   66   245 0.743  20.16
 2.06 Intr -  32167  32076   92  2  2   58   86   107 0.362   7.21
 2.05 Intr -  36219  36088  132  1  0   75   88    70 0.613   6.32
 2.04 Intr -  37404  37248  157  0  1   51   57    67 0.060  -0.52
 2.03 Intr -  44623  44553   71  2  2   90  102    30 0.307   3.50
 2.02 Intr -  47110  47016   95  0  2   21   81    94 0.380   1.61
 2.01 Init -  50724  50711   14  0  2   79  115     2 0.387   1.79
 2.00 Prom -  50879  50840   40                              -7.76

 3.00 Prom +  53527  53566   40                              -3.06
 3.01 Init +  54200  54494  295  1  1   70  -36   227 0.189   5.86
 3.02 Term +  54875  55029  155  0  2   33   50   215 0.294  10.28
 3.03 PlyA +  55217  55222    6                              -5.41

 4.00 Prom +  55231  55270   40                              -7.66
 4.01 Sngl +  55628  56107  480  1  0   59   42   713 0.851  59.89
 4.02 PlyA +  57120  57125    6                               1.05

 5.00 Prom +  57567  57606   40                              -1.96
 5.01 Init +  60659  60731   73  1  1   95   91     1 0.432   2.33
 5.02 Intr +  69561  69706  146  1  2   74   53   134 0.204   8.50
 5.03 Term +  79389  79484   96  2  0  123   46    63 0.686   3.57
 5.04 PlyA +  81855  81860    6                               1.05

 6.00 Prom +  82019  82058   40                              -1.76
 6.01 Init + 100001 100076   76  1  1   63  110    64 0.780   7.36
 6.02 Intr + 102307 102362   56  2  2   79   65    49 0.648   0.40
 6.03 Intr + 106756 106779   24  0  0  111   96    -6 0.599   0.72
 6.04 Intr + 108865 108939   75  0  0  123   53    67 0.982   6.41
 6.05 Intr + 110008 110097   90  0  0  136   35    93 0.782   8.99
 6.06 Intr + 111789 111823   35  2  2  110   50    45 0.351  -0.08
 6.07 Term + 134223 134289   67  0  1  -14   43   212 0.941   3.91
 6.08 PlyA + 134660 134665    6                               1.05

 7.00 Prom + 135831 135870   40                              -5.56
 7.01 Sngl + 138789 139127  339  2  0   55   48   243 0.996  13.03
 7.02 PlyA + 139797 139802    6                               1.05

 8.00 Prom + 142614 142653   40                              -3.06
 8.01 Init + 153799 153918  120  0  0  102   81    58 0.080   6.74
 8.02 Intr + 159297 159437  141  2  0   38  110    40 0.023   1.75
 8.03 Intr + 174747 174793   47  2  2  101  110   -27 0.000  -1.99
 8.04 Intr + 174975 175039   65  0  2   50   91    83 0.000   3.16
 8.05 Intr + 186912 186970   59  1  2  106   94   -13 0.015  -0.30
 8.06 Intr + 196015 196141  127  0  1   94   92   183 0.997  19.55
 8.07 Intr + 198443 198533   91  0  1   16  115   140 0.981   8.55
 8.08 Intr + 199090 199233  144  1  0   89   84   101 0.992   9.20
 8.09 Intr + 201102 201310  209  0  2   86   91   158 0.972  14.62
 8.10 Term + 205866 206008  143  1  2   48   54   161 0.988   6.79
 8.11 PlyA + 206343 206348    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 176981 176896   86  0  2   95   93    23 0.928   3.04
S.002 Init - 178055 177980   76  2  1   61   87    58 0.930   4.25


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:100370489_100582312|GENSCAN_predicted_peptide_1|61_aa
XKNLTTYVLGLISEQRCFVTVMIVASESTLCYSLNACAPQNSYVETLILSAMVVEGTNYL
L

>gi568815596f:100370489_100582312|GENSCAN_predicted_CDS_1|186_bp
nagaaaaatctgaccacgtatgtcctaggcctaatctccgaacagcggtgttttgtaact
gtcatgattgtagcttcggagagtaccttgtgttatagcctgaatgcttgtgcgccccag
aattcctatgttgaaactctaatcctcagtgcaatggtagttgaaggcaccaactacttg
ctgtag

>gi568815596f:100370489_100582312|GENSCAN_predicted_peptide_2|479_aa
MHGASRSSAPGVFLTSAAAAATSRDPTGRGAEASGQVTRGTKNLSSGETQQGNVSPRLQK
ATLLVTPGNTRSLIHGHLRVVCEPSGENPGSLAGGELPTAGCIQVWPDNYVVGRVSEWLR
CDNMHHQWLLLAACFWVIFMFMVASKFITLTFKDPDVYSAKQEFLFLTTMPEVRKLPEEK
HIPEELKPTGKELPDSQLVQPLVYMERLELIRNVCRDDALKNLSHTPVSKFVLDRIFVCD
KHKILFCQTPKVGNTQWKKVLIVLNGAFSSIEEIPENVVHDHEKNGLPRLSSFSDAEIQK
RLKTYFKFFIVRDPFERLISAFKDKFVHNPRFEPWYRHEIAPGIIRKYRRNRTETRGIQF
EDFVRYLGDPNHRWLDLQFGDHIIHWVTYVELCAPCEIMYSVIGHHETLEDDAPYILKEA
GIDHLVSYPTIPPGITVYNRTKVEHYFLGISKRDIRRLYARFEGDFKLFGYQKPDFLLN

>gi568815596f:100370489_100582312|GENSCAN_predicted_CDS_2|1440_bp
atgcatggggcaagccggtctagcgcgccgggcgtcttccttacttccgctgccgccgcc
gccacatcccgggacccgacgggccgcggcgcggaggcctcggggcaagtgacaagagga
accaagaacctcagttcaggggaaacacagcaaggaaatgtgagccccaggctgcagaag
gcaaccctattggtgaccccaggaaacacacgaagccttatacacgggcacctgagggtg
gtttgcgagccatccggagaaaacccaggcagcttggcaggtggtgagctccccactgca
ggctgtattcaggtgtggccggataactacgtggtgggaagagtcagtgaatggctgcgg
tgtgacaacatgcaccaccagtggcttctgctggccgcatgcttttgggtgattttcatg
ttcatggtggctagcaagttcatcacgttgacctttaaagacccagatgtgtacagtgcc
aaacaggagtttctgttcctgacaaccatgccggaagtgaggaagttgccagaagagaag
cacattcctgaggaactgaagccaactgggaaggagcttccagacagccagctcgttcag
cccctggtctacatggagcgcctggaactcatcagaaacgtctgcagggatgatgccctg
aagaatctctcgcacactcctgtctccaagtttgtcctggaccgaatatttgtctgtgac
aagcacaagattcttttctgccagactcccaaagtgggcaacacccagtggaagaaagtg
ctgattgttctaaatggagcattttcttccattgaggagatccccgaaaacgtggtgcac
gaccacgagaagaacggccttcctcggctctcttccttcagtgatgcagaaattcagaag
cgattgaaaacatacttcaagttttttattgtaagagatcccttcgaaagacttatttct
gcatttaaggataaatttgttcacaatccccggtttgagccttggtacaggcatgagatt
gctcctggcatcatcagaaaatacaggaggaaccggacagagacccgggggatccagttt
gaagatttcgtgcgctacctcggcgatccgaaccacagatggctagaccttcagtttggg
gaccacatcattcactgggtgacgtatgtagagctctgtgctccctgtgagataatgtac
agtgtgattggacaccacgagaccctggaggacgatgccccatacatcttaaaagaggct
ggcattgaccacctggtgtcatacccgactatccctccgggcattaccgtgtataacaga
accaaggtggagcactatttcctgggcatcagcaaacgagacatccgacgcctgtatgcc
cgtttcgaaggggactttaagctctttgggtaccagaaaccagactttttgctaaactaa

>gi568815596f:100370489_100582312|GENSCAN_predicted_peptide_3|149_aa
MTKCFLPPTSSPSEHHRVEHGSGLTQTPSSEEISPTKFPGLYHTGEPSPPHDILHKPPDI
VSDDEKDHGKKKGNFKKKEKRTEGYAAFQEDSSGDEAEKKYGMKCEGIYRVSGIKSKMDE
LKAAYDQEKSTNLEEYDPNTVASLRKQYL

>gi568815596f:100370489_100582312|GENSCAN_predicted_CDS_3|450_bp
atgacaaagtgcttcctgccccccaccagcagccccagtgaacaccacagggtggagcat
ggcagtgggcttacccagacccccagctctgaagagatcagccctactaaatttcctgga
ttgtaccacactggtgagccctcacctccccatgacatcctccacaagcctcctgatata
gtgtctgatgatgagaaagaccatgggaagaaaaaaggaaattttaagaaaaaggaaaag
aggaccgaaggctatgcagcctttcaggaagatagctctggagatgaggcagaaaagaag
tatggcatgaagtgtgaaggcatctacagagtatcaggaattaaatcaaagatggatgag
ctaaaagcagcctatgaccaggagaagtctacaaacttggaagaatatgaccctaacact
gtagccagtttgcggaagcagtatttgtga

>gi568815596f:100370489_100582312|GENSCAN_predicted_peptide_4|159_aa
MNENEEVINILLVQEKEILTKQEELLGMEQFLRRQIASEKEEIECLRAETAEIQSHQQQG
LSETEEYSSESESEDEEELQIILEDLQRQNEELEIKNNHLNQAIHEESEAVIEPRMQPWL
LQLQPDRAKQQAQEDEEPEWRGGAIQTPKNGILEPVAAK

>gi568815596f:100370489_100582312|GENSCAN_predicted_CDS_4|480_bp
atgaatgaaaatgaagaagttataaatattctccttgttcaggagaaagagatcctgact
aaacaggaggagctcctgggcatggagcagtttctgcgccggcagattgcctcagaaaaa
gaagagattgagtgcctcagagccgagactgcggaaattcagagtcaccagcagcagggc
ctaagcgagactgaggagtactcctccgagagcgagagtgaggatgaggaggagctgcag
atcattctggaagatttacagagacagaacgaagagctggaaataaagaacaaccatttg
aatcaagcaattcacgaggagagtgaggccgtcatcgagccgcgcatgcagccctggctg
ctccagttgcagccagacagggccaagcagcaggcgcaggaggacgaggagcccgagtgg
cgcggaggtgccatccagacgcccaagaatggcatcctcgagccagtagcagctaaatag

>gi568815596f:100370489_100582312|GENSCAN_predicted_peptide_5|104_aa
MVLASASGQNLRKLLFMVEGDGGADLGDACDQRERLVPFATELNMYLAQEAENPEEKFSR
TGRAVDQLLPHTEAGIQPINPRFPSSPQFPVSVKTTTLFSALQA

>gi568815596f:100370489_100582312|GENSCAN_predicted_CDS_5|315_bp
atggtgctagcatctgcttctggtcagaacctcaggaaacttttattcatggtagaaggt
gatgggggagcagacttgggtgatgcgtgtgaccagagggaaaggctggtgccctttgcc
acagagctaaacatgtacctggcccaggaggcagagaatcccgaggagaaattcagcagg
actggaagagctgtggatcagctgctgccccacaccgaggcaggaatccaacctatcaac
ccacggtttccctccagccctcagttcccagtctccgtcaagaccaccaccctcttctct
gccttgcaggcctga

>gi568815596f:100370489_100582312|GENSCAN_predicted_peptide_6|140_aa
MKHLRPQFPLILAIYCFCMLQIPSSGFPQPLADPSDGLDIVQLEDNQDIYKRFPPVHPLM
HLAAKLANRRMKRILQRGSGTAAVDFTKKVHKSLGDCDPQRKPYPRRPRNGRNIEDEAHK
NDDDDDDDDDDDDISKESYV

>gi568815596f:100370489_100582312|GENSCAN_predicted_CDS_6|423_bp
atgaaacatcttcgtccccagttccctctcatcttggccatctactgcttctgcatgcta
cagattccctcctcaggatttcctcaacctttagctgatccttcagatggcttggatatt
gtgcagcttgaggataatcaagacatatacaaaaggtttcctccagtgcatcctctaatg
cacctggctgccaagctcgccaacaggcggatgaagagaattctgcagcgaggctcgggg
actgctgcagtggacttcaccaagaaggtacacaagagccttggagactgcgacccccaa
agaaagccctacccgagaaggcccaggaatggaagaaacattgaagatgaggcccataag
aatgatgatgatgatgatgatgatgatgatgatgatgatatcagcaaggaatcctatgtc
tag

>gi568815596f:100370489_100582312|GENSCAN_predicted_peptide_7|112_aa
MSVEVSEAASVEEQKEMEDTVTSPEKVEAAKLKARYPHLGQMPGGSDFLRKRLQKGQKYF
DSGDYNMAKAKMKNEQLPTAALDKMEVTGDHIPTPEDLPQQKPSIVASKLAG

>gi568815596f:100370489_100582312|GENSCAN_predicted_CDS_7|339_bp
atgtctgtggaagtctccgaggcagcctctgtggaggagcagaaggaaatggaagataca
gtgactagtccagagaaagttgaagcagcaaaattaaaagcaagatatcctcatctggga
caaatgcctggaggttcagatttcttaaggaaacgattgcagaaagggcaaaaatatttt
gattctggggattacaacatggctaaagcaaaaatgaagaacgagcaacttcctactgca
gctctggataagatggaggtcacgggtgaccacattcccactccagaggaccttcctcaa
cagaaaccatccattgttgctagcaagctggctggttga

>gi568815596f:100370489_100582312|GENSCAN_predicted_peptide_8|381_aa
MAKGSQNLSLLILAVINVVLGSLEKLVDKRPMLVIKQLNMHLFQDAASGGLCNTPGIILH
PAVSSTFNQHLTWTMPGSRDLGLQGDQNMKNPYLPLRDAVRIRSWKTSNLKIISLMAHMA
ISNAGSKCVQTYQEKLTLLQTLPEDPNADTEWNDILRKKGILPPKESLKELEEEAEEEQR
ILQQSVVKTYEDMTLEELEDHEDEFNEEDERAIEMYRRRRLAEWKATKLKNKFGEVLEIS
GKDYVQEVTKAGEGLWVILHLYKQGIPLCALINQHLSGLARKFPDVKFIKAISTTCIPNY
PDRNLPTIFVYLEGDIKAQFIGPLVFGGMNLTRDELEWKLSESGAIMTDLEENPKKPIED
VLLSSVRRSVLMKRDSDSEGD

>gi568815596f:100370489_100582312|GENSCAN_predicted_CDS_8|1146_bp
atggccaagggcagtcagaatctatccctgctcattcttgctgtgataaatgtggtcctt
gggagtctagagaagttggttgacaagagaccgatgctggtgataaaacagttgaatatg
cacctattccaagatgctgcctcaggaggcttatgcaacacaccaggcatcattttgcac
cctgccgtatcctctacgttcaaccagcacctcacatggacgatgccagggtcccgggat
cttggtcttcagggggaccagaatatgaaaaatccctacctacctcttagagatgcagtg
agaatcagaagttggaagacttcaaacctgaagattatctctctcatggcccacatggcc
atctccaatgcagggagcaaatgtgtgcaaacatatcaagaaaagttgacattgttacag
acactgccagaggaccccaacgcagacactgaatggaatgacatcttacgcaaaaagggt
atcttaccccccaaggaaagtctgaaagaattggaagaggaggcagaagaggagcagcgc
atcctccagcagtcagtggtgaaaacatatgaagatatgactttggaagagctggaggat
catgaagacgagtttaatgaggaggatgaacgtgctattgaaatgtacagacggcggaga
ctggctgagtggaaagcaactaaactgaagaataaattcggagaagttttggagatctca
gggaaggattatgttcaagaagttaccaaagctggcgagggcttgtgggtcatcttgcac
ctttacaaacaaggaattcccctctgtgccctgataaatcagcacctcagtggacttgcc
aggaagtttcctgatgtcaaatttatcaaagccatttcaacaacctgcatacccaattat
cctgataggaatctgcccacgatatttgtttacctggaaggagatatcaaggctcagttt
attggtcctctggtgtttggcggcatgaacctgacaagagatgagttggaatggaaactg
tctgaatctggagcaattatgacagacctggaggaaaaccctaagaagccgattgaagac
gtgttgctgtcctcagtgcggcgctctgtcctcatgaagagggacagcgattccgagggt
gactga