GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:28:58

Sequence gi568815575f:2652275_2911452 : 259178 bp : 45.66% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +    198    237   40                              -2.66
 1.01 Init +   2563   2611   49  0  1   83   32    67 0.398   1.71
 1.02 Term +   9366   9391   26  1  2  128   52    24 0.465   1.19
 1.03 PlyA +  10779  10784    6                               1.05

 2.04 PlyA -  11885  11880    6                               1.05
 2.03 Term -  20884  20823   62  2  2   89   51    38 0.503  -1.83
 2.02 Intr -  24784  24698   87  2  0  106   69    48 0.462   4.64
 2.01 Init -  34074  33984   91  0  1   88   80    27 0.254   0.55
 2.00 Prom -  35014  34975   40                              -4.16

 3.00 Prom +  35649  35688   40                              -2.86
 3.01 Init +  39087  39153   67  2  1  110   88   248 0.995  26.23
 3.02 Intr +  62148  62180   33  1  0  114  105    15 0.831   3.99
 3.03 Intr +  67387  67431   45  2  0  108  101    57 0.986   7.38
 3.04 Intr +  68082  68150   69  1  0   57  111    61 0.947   4.45
 3.05 Intr +  70353  70400   48  1  0  116   87    37 0.915   5.05
 3.06 Intr +  73986  74099  114  1  0  104  115    95 0.963  14.22
 3.07 Intr +  85926  85982   57  1  0  107   99    86 0.851  10.46
 3.08 Intr +  88409  88452   44  0  2   80   94    -4 0.825  -2.64
 3.09 Intr +  88861  88943   83  0  2   81  121     3 0.839   1.34
 3.10 Term +  89350  89461  112  1  1   61   47   135 0.444   4.73
 3.11 PlyA +  89606  89611    6                               1.05

 4.00 Prom +  90816  90855   40                              -1.56
 4.01 Init + 100001 100061   61  1  1   91   94    44 0.897   4.71
 4.02 Intr + 101632 101748  117  2  0   80  110    19 0.826   3.74
 4.03 Term + 102353 102465  113  0  2   38   47    80 0.381  -2.38
 4.04 PlyA + 102950 102955    6                               1.05

 5.00 Prom + 108538 108577   40                              -3.76
 5.01 Init + 110152 110215   64  0  1   52  105   100 0.931   9.41
 5.02 Intr + 115278 115398  121  1  1   73   58    50 0.863   0.05
 5.03 Intr + 116084 116217  134  2  2   61   80    83 0.898   5.09
 5.04 Intr + 117467 117499   33  0  0   91   91    15 0.551   0.29
 5.05 Intr + 118276 118317   42  2  0   99  119    69 0.998   9.31
 5.06 Intr + 122442 122465   24  1  0   99  109    25 0.910   3.70
 5.07 Intr + 129792 129854   63  1  0  108   63    88 0.153   6.99
 5.08 Intr + 142261 142329   69  2  0  106   96    87 0.791  10.45
 5.09 Intr + 145036 145112   77  2  2  109   64    62 0.705   5.13
 5.10 Intr + 146988 147105  118  2  1   59   62   110 0.655   5.54
 5.11 Intr + 154427 154498   72  0  0  108   45    32 0.280   0.28
 5.12 Intr + 155911 155946   36  2  0  126   88     5 0.587   2.53
 5.13 Intr + 159062 159178  117  0  0  104  115    44 0.969   9.14
 5.14 Term + 160236 160360  125  1  2  105   39    30 0.552  -1.65
 5.15 PlyA + 161715 161720    6                               1.05

 6.05 PlyA - 161767 161762    6                               1.05
 6.04 Term - 167636 167521  116  0  2   50   39   110 0.906   1.03
 6.03 Intr - 171760 171736   25  1  1   93  115    26 0.870   3.40
 6.02 Intr - 177569 177309  261  2  0  108   49   185 0.947  14.28
 6.01 Init - 177916 177860   57  1  0   96   23    52 0.380  -1.02
 6.00 Prom - 179646 179607   40                              -7.96

 7.00 Prom + 186775 186814   40                              -1.96
 7.01 Init + 190875 191080  206  2  2   79  110   209 0.853  18.54
 7.02 Intr + 201706 201880  175  1  1   70  105   241 0.960  23.94
 7.03 Intr + 202719 202881  163  2  1   73  127   146 0.999  16.55
 7.04 Intr + 204224 204350  127  0  1   63   92    82 0.983   5.84
 7.05 Intr + 207569 207791  223  2  1   76   98   138 0.918  11.73
 7.06 Intr + 209248 209448  201  0  0   72   95    73 0.839   5.88
 7.07 Term + 228778 228939  162  0  0   92   36   324 0.829  25.54
 7.08 PlyA + 229986 229991    6                               1.05

 8.05 PlyA - 230031 230026    6                               1.05
 8.04 Term - 255358 254997  362  2  2  122   42   282 0.989  21.70
 8.03 Intr - 256568 256447  122  1  2   60   79    76 0.994   4.04
 8.02 Intr - 257705 257543  163  0  1   91   98   121 0.997  12.43
 8.01 Intr - 258519 258385  135  1  0   64  113    80 0.992   8.64

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 129792 129874   83  1  2  108   47   115 0.824   7.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:2652275_2911452|GENSCAN_predicted_peptide_1|24_aa
MLLELHKAVPLIGSTPGAVFGKEQ

>gi568815575f:2652275_2911452|GENSCAN_predicted_CDS_1|75_bp
atgcttctggagctccacaaagctgtccctttaattggcagcacgcctggtgcggtgttt
gggaaggagcagtga

>gi568815575f:2652275_2911452|GENSCAN_predicted_peptide_2|79_aa
MEFHHVGQAGLELLTSTDLPASASRSAGITGSDQDTCTFCLQVLVTGKSMNRILIDVCAG
LQGVTVFGDMVFKKVINIK

>gi568815575f:2652275_2911452|GENSCAN_predicted_CDS_2|240_bp
atggagtttcaccacgttggccaggctggtctcgaactcctgacctcaactgatctgccg
gcctcggcctcccgaagtgctggtattacagggtcagatcaggacacctgcacattctgt
ttgcaggttctcgtcaccggcaaatcaatgaaccgaattttaattgatgtgtgtgcagga
ctgcagggtgtcactgtgtttggagatatggtctttaaaaaggtgattaatataaaatga

>gi568815575f:2652275_2911452|GENSCAN_predicted_peptide_3|223_aa
MARGAALALLLFGLLGVLVAAPDGGFDLSDALPGDDFDLGDAVVDGENDDPRPPNPPKPM
PNPNPNHPSSSGSFSDADLADGVSGGEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKL
CFKENAEQGEVDMESHRNANAEPAEIKPLAPESCRNCVHNLGCLQITCPSSTSETPGSPD
FFLIKIRYSSVSRYSSKSRYSLHPDTVLPKMYKMYRIFPTLKT

>gi568815575f:2652275_2911452|GENSCAN_predicted_CDS_3|672_bp
atggcccgcggggctgcgctggcgctgctgctcttcggcctgctgggtgttctggtcgcc
gccccggatggtggtttcgatttatccgatgcccttcctggggatgactttgacttagga
gatgctgttgttgatggagaaaatgacgacccacgaccaccgaacccacccaaaccgatg
ccaaatccaaaccccaaccaccctagttcctccggtagcttttcagatgctgaccttgcg
gatggcgtttcaggtggagaagccgacgccccaggcgtgatccccgggattgtgggggct
gtcgtggtcgccgtggctggagccatctctagcttcattgcttaccagaaaaagaagcta
tgcttcaaagaaaatgcagaacaaggggaggtggacatggagagccaccggaatgccaac
gcagagccagctgaaataaaaccactggctcctgaaagttgtaggaactgtgtccacaat
cttggctgtttacaaatcacgtgtccatcgagcacgtctgaaacccctggtagccccgac
ttctttttaattaaaataagatactcctctgtatccagatactcctctaaatccaggtac
tccctacatccagatactgtacttcctaagatgtacaagatgtaccgcattttcccaaca
ctgaagacttga

>gi568815575f:2652275_2911452|GENSCAN_predicted_peptide_4|96_aa
MESWWGLPCLAFLCFLMHARVQCSINYVRYATPHYKVDCVLDDLSIRWLMKSVLSTLKAG
RLQAEEQGEPVQVPKLKNLESDVPASTMGERCRPED

>gi568815575f:2652275_2911452|GENSCAN_predicted_CDS_4|291_bp
atggagagctggtggggacttccctgtcttgcgttcctgtgttttctaatgcacgcccga
gtacaatgttcaataaattatgtgaggtatgcaacacctcattataaagttgactgtgtg
ctagatgatttgtccatccgttggctgatgaaaagtgttctgagcactctgaaggcaggc
cgtctgcaggctgaggagcaaggagagccagtccaggttccaaaactgaagaacttggag
tctgatgttccagcatccaccatgggagaaagatgtaggccagaagactag

>gi568815575f:2652275_2911452|GENSCAN_predicted_peptide_5|364_aa
MGSEEQIMHQGGLLSSGVCSPVENKPRESNGVMCNPTLETETPELALSTWDISQPRGLTP
DPCLDWNCWQPWRGDVAQIQEADTVPVPQPSLSSLDHDDQERWRRPDTFIRLTAFGSGQR
DFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPDSGGSYFNDVDRDDGRYPPRPRPR
PPAGGGGGGYSSYGNSDNTHGTPTSGHAMALVSGVPFFVSMLSIEKNDETSVKDLFAKVK
VKGAPQETGRGGYRLNSRYGNTYGKGIMSYRICGDHHSTYGNPEGNMVAKIVSPIVSVVV
VTLLGAAASYFKLNNRRNCFRTHGNQKGVPIPTVFALGFAFGLKNPKTFPCAPSAGEWAV
STVS

>gi568815575f:2652275_2911452|GENSCAN_predicted_CDS_5|1095_bp
atgggttccgaggagcagatcatgcaccagggcggcctgctcagctctggtgtctgcagc
cccgtggaaaataaaccccgtgaaagcaatggcgtcatgtgcaacccgaccttggagaca
gagaccccagagttagcgttgtctacctgggacatctcccagcccaggggtcttactcca
gacccgtgtctcgactggaactgctggcagccttggaggggagatgttgcacagatccaa
gaggctgacacggttcctgtcccccagcccagtctgagcagcttggaccatgatgatcaa
gagcgctggaggaggccagacacattcattagattaactgcttttggatcaggtcaaaga
gactttgatttggcagatgcccttgatgaccctgaacccaccaagaagccaaactcagat
atctacccaaagccaaaaccaccttactacccacagcccgagaatcccgacagcggtgga
agttacttcaatgatgtggaccgtgatgacggacgctacccgcccaggcccaggccacgg
ccgcctgcaggaggtggcggcggtggctactccagttatggcaactccgacaacacgcac
ggtacccctacatctgggcatgcgatggccctggtgtctggtgttcccttctttgtgtcc
atgttgtcaatcgagaaaaatgacgagacgagcgtaaaagatttatttgccaaagttaag
gttaagggcgcgccccaggagacaggaagagggggctatagactcaactctcgttatgga
aatacttatggtaaaggaattatgtcttacagaatatgtggagatcaccattcaacgtat
ggcaatccagaaggcaatatggtagcaaaaatcgtgtctcccatcgtatccgtggtggtg
gtgacactgctgggagcagcagccagttatttcaaactaaacaataggagaaattgtttc
aggacccatggaaaccagaaaggggtgcccattcctacggtgtttgctttaggatttgca
tttggcctcaaaaatcctaaaaccttcccatgcgctccctctgctggtgaatgggcagta
tcaaccgttagctaa

>gi568815575f:2652275_2911452|GENSCAN_predicted_peptide_6|152_aa
MVSGAAGSGRGPADLRPGASPATPLRLNTHAPSNDNAPGTPPDLSGVSSCPAAPRTCLEF
WASSSSTPAGAPRSPLSTPWTTPALPDASICTSSELGLPLPAPPGQEAMESLAAALYEVH
NWAQIKVVVEAFRILKEAEKALNDTPKTNFYV

>gi568815575f:2652275_2911452|GENSCAN_predicted_CDS_6|459_bp
atggtcagtggcgccgcgggcagtgggcgcggacctgcagacctgcgcccgggagcatca
cctgcgaccccgctgcgtcttaacacccatgcgcccagcaacgacaacgcccccgggaca
ccacccgacctcagcggtgtcagcagctgccccgccgccccgcgcacctgcttggagttc
tgggcatcctcttcctccaccccagctggcgccccccggtcacccctctccactccctgg
accacccctgcgctcccggacgccagtatctgcacctcctccgagcttgggctgcctctg
cccgcgccccccggccaggaagccatggagagcttggcagcagctttgtatgaagttcat
aactgggctcagatcaaagttgtggtggaagcctttagaattctgaaggaagcagaaaag
gcattgaatgacacccccaagaccaacttttatgtttaa

>gi568815575f:2652275_2911452|GENSCAN_predicted_peptide_7|418_aa
MAPSPLLSLRSVTLVFLLIFTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLI
TPQVSSLLRVILSKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCV
FLDADTLVLSNVDELFDRGEFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSF
DGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKP
WNYKYNPQSGSVLEQGSASSSQHQAAFLHLWWTVYQNNVLPLYKSVQAGEARASPGHTLC
HSDVGGPCADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEG
RRSEDVDLAVSVSQISIEEKVKELSPEEERRKWEEGRIDYMGKDAFARIQEKLDRFLQ

>gi568815575f:2652275_2911452|GENSCAN_predicted_CDS_7|1257_bp
atggccccgtcacccctgctgtccctcaggagtgtaactctggtgtttctgttgattttc
acagtgactgatcaggcttttgtcacactagccaccaatgacatctactgccagggcgcc
ctggtcctggggcagtcactgaggagacacaggctgacgaggaagctggtggtgttgatc
actcctcaggtgtccagcctgctcagggtcatcctctcgaaggtgttcgatgaagtcatt
gaagtgaatctaatcgatagtgccgactacatccacctggcctttctgaagagacctgag
ctcgggctcaccctcaccaagcttcactgttggactctcactcactacagcaagtgtgtc
ttcctggatgcagacactctggtgctgtccaatgtcgatgagctgtttgacaggggagag
ttttctgcggccccggaccccggatggccggattgcttcaatagcggggtgtttgtcttc
cagccttctctccacacgcataaactcctgctacagcacgccatggaacacggcagcttt
gacggggcagaccaaggcttactgaatagtttcttcaggaactggtcgaccacagacatc
cacaagcacctgccgttcatctataacttgagtagtaacacgatgtacacttacagccct
gccttcaagcaattcggttccagtgcaaaggtcgtccactttttggggtccatgaaacct
tggaactacaagtacaatccacagagtggctcggtgttggagcaaggctcagcgtccagc
agccagcaccaggcggcattccttcatctctggtggacggtctaccagaacaacgtgctg
cccctttataaaagcgtccaagcgggggaagcacgcgcgtctcctggtcacacactttgc
cacagtgatgtgggggggccgtgtgcggattcagcctctggtgttggagagccgtgtgaa
aattcaacacccagtgcgggcgtgccgtgtgcaaattcaccactgggttctaaccagcct
gctcagggccttccggagccgacccagatagtggatgagaccctgtccctacctgaagga
cgccgttcagaagatgtcgacctggccgtctctgtttcccagatctccatcgaagagaag
gtgaaggaattgagccccgaggaagagaggaggaagtgggaggaaggccgtatcgactac
atggggaaggacgcgtttgctcgcatccaggagaagctggaccggttcctgcagtaa

>gi568815575f:2652275_2911452|GENSCAN_predicted_peptide_8|260_aa
XKVLNAIEDNGLKNSTFTYFTSDHGGHLEARDGHSQLGGWNGIYKGGKGMGGWEGGIRVP
GIFHWPGVLPAGRVIGEPTSLMDVFPTVVQLVGGEVPQDRVIDGHSLVPLLQGAEARSAH
EFLFHYCGQHLHAARWHQKDSGSVWKVHYTTPQFHPEGAGACYGRGVCPCSGEGVTHHRP
PLLFDLSRDPSEARPLTPDSEPLYHAVIARVGAAVSEHRQTLSPVPQQFSMSNILWKPWL
QPCCGHFPFCSCHEDGDGTP

>gi568815575f:2652275_2911452|GENSCAN_predicted_CDS_8|783_bp
ngtaaggttcttaatgccatcgaagacaatggtttaaagaactcaacattcacgtatttc
acctctgaccatggaggacatttagaggcaagagatggacacagccagttagggggatgg
aacggaatttacaaaggtgggaagggcatgggaggatgggaaggtgggatccgcgtgccc
gggatcttccactggccgggggtgctcccggccggccgagtgattggagagcccacgagc
ctgatggacgtgttccctactgtggtccagctggtgggtggcgaggtgccccaggacagg
gtgattgatggccacagcctggtacccttgctgcagggagctgaggcacgctcggcacat
gagttcctgtttcattactgtgggcagcatcttcacgcagcacgctggcaccagaaggac
agtggaagcgtctggaaggttcattacacgaccccgcagttccaccccgagggagcgggg
gcctgctacggccgaggcgtctgcccatgctccggggagggcgtgacccatcacagaccc
cctttgctctttgacctctccagggacccctccgaggcacggcccctgacccccgactcc
gagcccctgtaccacgccgtgatagcaagggtaggtgccgcggtgtcggagcatcggcag
accctgagtcctgtgccccagcagttttccatgagcaacatcctgtggaagccgtggctg
cagccgtgctgcggacatttcccgttctgttcatgccacgaggatggggatggcaccccc
tga