GENSCAN 1.0	Date run:  6-Nov-116	Time: 09:56:34

Sequence gi568815590f:85365271_85580786 : 215516 bp : 38.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    437    432    6                               1.05
 1.01 Sngl -   3871   3485  387  1  0   58   35   178 0.580   5.46
 1.00 Prom -   4015   3976   40                              -3.45

 2.00 Prom +   5522   5561   40                              -5.65
 2.01 Init +   6886   7098  213  0  0   74   48   125 0.746   5.89
 2.02 Intr +   7836   7954  119  2  2   37   55   134 0.799   3.34
 2.03 Intr +  17684  17805  122  2  2   85   54    93 0.482   4.82
 2.04 Term +  20012  20070   59  0  2  119   37    65 0.567   1.37
 2.05 PlyA +  20526  20531    6                               1.05

 3.02 PlyA -  21685  21680    6                               1.05
 3.01 Sngl -  55838  55038  801  2  0   42   46   423 0.941  29.08
 3.00 Prom -  57284  57245   40                              -6.15

 4.02 PlyA -  57453  57448    6                               1.05
 4.01 Sngl -  58249  57950  300  1  0   51   42   244 0.839  11.64
 4.00 Prom -  64238  64199   40                              -3.85

 5.00 Prom +  66110  66149   40                              -5.85
 5.01 Init +  73640  73673   34  1  1  116  113    44 0.782   9.79
 5.02 Intr +  74442  74639  198  1  0   79  108   160 0.955  15.50
 5.03 Intr +  76803  76921  119  1  2   48   94   175 0.999  13.36
 5.04 Intr +  78764  78856   93  1  0   84   98    65 0.987   6.34
 5.05 Intr +  79886  79948   63  1  0   82   92    57 0.919   3.50
 5.06 Intr +  80872  81027  156  0  0   86   99   120 0.989  12.19
 5.07 Intr +  82764  82862   99  2  0  123   69    75 0.953   8.49
 5.08 Term +  82909  83001   93  0  0  102   42    92 0.981   2.85
 5.09 PlyA +  83634  83639    6                               1.05

 6.00 Prom +  88765  88804   40                              -1.45
 6.01 Init +  90270  90479  210  2  0   86   67   222 0.891  18.73
 6.02 Term +  96800  96901  102  1  0  102   38    73 0.750   1.00
 6.03 PlyA +  96981  96986    6                               1.05

 7.00 Prom +  97720  97759   40                             -11.44
 7.01 Init +  98268  98469  202  2  1   95    2   150 0.980   6.26
 7.02 Intr +  98650  98845  196  2  1  104  113   335 0.991  35.15
 7.03 Intr +  99463  99545   83  1  2   43   72    47 0.875  -3.04
 7.04 Intr + 100002 100199  198  1  0   96   82   338 0.982  32.40
 7.05 Intr + 108423 108541  119  1  2   49   63    98 0.997   2.66
 7.06 Intr + 109054 109146   93  0  0   79   96    44 0.913   3.54
 7.07 Intr + 110528 110590   63  1  0   84   94    72 0.976   5.40
 7.08 Intr + 111850 112005  156  0  0   83   72   145 0.997  11.69
 7.09 Term + 115400 115519  120  1  0  112   44    97 0.994   5.19
 7.10 PlyA + 115662 115667    6                               1.05

 8.04 PlyA - 116239 116234    6                               1.05
 8.03 Term - 122403 122030  374  1  2   45   38   186 0.049   3.17
 8.02 Intr - 126667 126581   87  2  0  100   64    59 0.017   3.72
 8.01 Init - 133410 133329   82  0  1   80   14   116 0.053   4.59
 8.00 Prom - 138942 138903   40                              -5.45

 9.04 PlyA - 139703 139698    6                               1.05
 9.03 Term - 142270 142100  171  1  0  135   48    49 0.515   2.44
 9.02 Intr - 146783 146741   43  1  1   57   99    32 0.191  -1.48
 9.01 Init - 150646 150582   65  1  2   82  103    55 0.541   7.07
 9.00 Prom - 165249 165210   40                              -3.75

10.00 Prom + 166741 166780   40                              -2.35
10.01 Init + 167428 167479   52  0  1   63   72    40 0.770   1.27
10.02 Term + 170485 170690  206  2  2   72   49   131 0.784   4.15
10.03 PlyA + 170757 170762    6                               1.05

11.05 PlyA - 170879 170874    6                               1.05
11.04 Term - 173680 173501  180  1  0   70   51   146 0.822   5.73
11.03 Intr - 184521 184348  174  0  0  112   41    41 0.003   1.01
11.02 Intr - 201849 201710  140  1  2   12   61   116 0.007   0.56
11.01 Init - 213108 213027   82  0  1   64  100    72 0.553   7.18

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 127522 127734  213  0  0   85   70   182 0.823  14.90
S.002 Init + 181695 181872  178  2  1   70   91   113 0.858   9.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:85365271_85580786|GENSCAN_predicted_peptide_1|128_aa
MMRSLTEVGEILRGKNPEIRVQGWERNGYFLGNVPRCPDLPLSYSLQTQTAREAFFEPPW
KKPMTPKSFPRSSIQRLGTASSRKSDLVSGKEDLLESYKIDVTVTSLEPPGSDAQCLNSL
RNEALPPR

>gi568815590f:85365271_85580786|GENSCAN_predicted_CDS_1|387_bp
atgatgcgcagtttaactgaggtgggggagattctcagagggaagaacccagagatcagg
gttcaaggctgggagagaaatggctacttccttggaaatgttcctaggtgtcctgatctg
ccactgagctacagccttcaaactcaaactgcaagggaagcttttttcgagcctccctgg
aaaaaacccatgaccccaaaatccttccctcgaagctctatccagaggcttggtactgct
tcaagtagaaaatctgatttggtttctgggaaggaggacctgttggaaagttacaagatt
gacgtgacagtgacaagtctggaacctcctggctctgatgcacagtgcttgaactccctt
agaaatgaagcattgcccccaagatag

>gi568815590f:85365271_85580786|GENSCAN_predicted_peptide_2|170_aa
MDDGPYAMVELKFRREHREDPGFWEALFKKECTLYSSDGYYETKRKPTRQKYSRKQVLAM
MWRNENPCAFLVIVKEEKEIRASVGVATQTVKVTATVQDGCFVKTEKTLNGNVDTERLGN
HRQAQQHQLNCSSPTGSSYIPSCAGVGLEPMSPLPRMLEKEFIELDRELD

>gi568815590f:85365271_85580786|GENSCAN_predicted_CDS_2|513_bp
atggacgatggaccatatgccatggtagaactaaagttcagacgcgagcacagagaagac
ccaggtttttgggaggccctctttaaaaaagaatgcactttgtactcatcagacggctac
tatgaaacaaaaagaaaaccaaccagacaaaaatacagcagaaaacaagtgttggcgatg
atgtggagaaatgagaacccttgtgcatttctggtaattgtgaaggaggaaaaagaaatt
cgtgctagtgttggtgttgcaactcaaactgtaaaagttacagctacagtgcaagatggg
tgtttcgttaagacggaaaagacattaaatgggaatgtggatacggagagacttggcaac
caccggcaggcacagcagcaccagctaaattgcagctcaccaacaggcagcagttacatc
cctagttgtgctggtgtgggtctggagccaatgagcccccttccacgaatgctagagaaa
gaatttattgaattagatagagagttggactag

>gi568815590f:85365271_85580786|GENSCAN_predicted_peptide_3|266_aa
MIISIDAEKTFDKIQQPFVLKTLNKLSIDRTYLKIIRATYDKPTANIILNGQKLEAFPLQ
TGTRQGCPLSPLLFDIVLEVLARAIGQEKEIKGIQLGKEEVKLSLFADDMIEYLENPVAS
AQNLLKLISNCSKVSGYKINVQKSQAFLCATNRQTESQIMSELPFTIASKRIEYLGIQLT
GDVKDLFKEDYKPLLHEIKEDENKWKNIPCSRIGRINIVKIAILPKVIYRFNAIPIKLPM
TFFTELEKLLQNSHGTKNEPALPRRS

>gi568815590f:85365271_85580786|GENSCAN_predicted_CDS_3|801_bp
atgattatctcaatagatgcagaaaagacctttgacaaaattcaacagcccttcgttcta
aaaaccctcaataagttaagtattgataggacgtatctcaaaataatacgagctacttat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgcaa
actggcacaagacagggatgccctctctcaccactcctatttgacatagtgttggaagtt
ctggccagggcaatcgggcaggagaaagaaataaagggtattcaattagggaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgaatatttagaaaaccccgtcgcctca
gcccaaaatctcctcaagctgataagcaactgcagcaaagtctcaggatacaaaatcaat
gtgcaaaaatcacaagcattcttatgcgccactaacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaatagaatacctaggaatccaacttaca
ggtgatgtgaaggacctcttcaaggaggactacaaaccactgctccatgaaataaaagag
gacgaaaacaaatggaagaacattccatgctcacggataggaagaatcaatatcgtgaaa
atagccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagagttggaaaaactccttcaaaattcacatggaaccaaaaacgagccc
gcattgccaagacgatcctaa

>gi568815590f:85365271_85580786|GENSCAN_predicted_peptide_4|99_aa
MGLWKRPNLRLIGVPESDRENGTKLENTLQDIIQENFPNLARQANIQIQEIQRIPQRYSS
RRATPRHIIVRFTKVEMKEKTLRAAREKGQVTHKGSPSD

>gi568815590f:85365271_85580786|GENSCAN_predicted_CDS_4|300_bp
atgggactatggaaaagaccaaatctgcgtctgattggtgtacctgaaagtgacagggag
aatggaaccaagctggaaaacactctgcaggatattatccaggaaaacttccccaatcta
gcaaggcaggcgaacattcaaattcaggaaatacagagaataccacaaagatactcctcg
agaagagcaactccaagacacataattgtcagattcaccaaagtggaaatgaaggaaaaa
acgttaagggcagccagagagaaaggtcaagttacccacaaaggaagcccatcagactaa

>gi568815590f:85365271_85580786|GENSCAN_predicted_peptide_5|284_aa
MAKEWGYASHNGPDHWHELFPNAKGENQSPVELHTKDIRHDPSLQPWSVSYDGGSAKTIL
NNGKTCRVVFDDTYDRSMLRGGPLPGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL
VHWNPKYNTFKEALKQRDGIAVIGIFLKIGHENGEFQIFLDALDKIKTKGKEAPFTKFDP
SCLFPACRDYWTYQGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLSSAENEPPVPL
VSNWRPPQPINNRVERKPTIGELGSLPPSGAPYSKSISFFHTEQ

>gi568815590f:85365271_85580786|GENSCAN_predicted_CDS_5|855_bp
atggccaaggagtggggctacgccagtcacaacggtcctgaccactggcatgaacttttc
ccaaatgccaagggggaaaaccagtcgcccgttgagctgcatactaaagacatcaggcat
gacccttctctgcagccatggtctgtgtcttatgatggtggctctgccaagaccatcctg
aataatgggaagacctgccgagttgtatttgatgatacttatgataggtcaatgctgaga
gggggtcctctccctggaccctaccgacttcgccagtttcatcttcactggggctcttcg
gatgatcatggctctgagcacaccgtggatggagtcaagtatgcagcggagcttcatttg
gttcactggaacccgaagtataacacttttaaagaagccctgaagcagcgcgatgggatc
gctgtgattggcatttttctgaagataggacatgagaatggcgagttccagattttcctt
gatgcattggacaagattaagacaaagggcaaggaggcgcccttcacaaagtttgaccca
tcctgcctgttcccggcatgccgggactactggacctaccagggctcattcaccacgccg
ccctgcgaggaatgcattgtgtggctgctgctgaaggagcccatgaccgtgagctctgac
cagatggccaagctgcggagcctcctctccagtgctgagaacgagcccccagtgcctctt
gtgagcaactggcgacctccacagcctatcaataacagggtggaaaggaaacctaccatt
ggagagcttggttccttgcctccttctggtgctccttactccaagtctatttcatttttc
cacactgagcaatga

>gi568815590f:85365271_85580786|GENSCAN_predicted_peptide_6|103_aa
MAVNTEGKGLSGTSTVPNTLGMKYMSNSDISAIGKKEQIAGLRVQATCKTRLWVTWVFGS
AMDSRRFLNDNPGKPLYIHKLCTQFLAPINAISPGPSEESHSN

>gi568815590f:85365271_85580786|GENSCAN_predicted_CDS_6|312_bp
atggctgtgaatactgaaggaaagggcttatcgggcacaagcacagtgcccaacacactg
ggcatgaaatacatgtcgaacagtgatatcagtgccataggaaagaaggaacagatagca
ggactgagggtacaggcgacctgcaaaacacggctctgggtcacctgggtctttgggtca
gcaatggactccagacgctttttgaatgataatcccgggaagccactctacattcacaaa
ctttgcactcaattcttggcacctatcaacgccatatctccagggccaagtgaagagtct
catagcaactaa

>gi568815590f:85365271_85580786|GENSCAN_predicted_peptide_7|409_aa
MGTGDERRRGSGSRAVPAAARLRSREGDGVRVEAPRPGLDGGAQEPPQPPHAQSSELRCQ
PRTPGPCRPPEPPPPGRPRARSWREPIKAGAGATRGHTVQAPKPPPPDRCRFLPCPDRQR
DHVPSLGVRQTQRSGSSEPAEQRSMRLAHLAHLWRVWGFPGPEHWHKDFPIAKGERQSPV
DIDTHTAKYDPSLKPLSVSYDQATSLRILNNGHAFNVEFDDSQDKAVLKGGPLDGTYRLI
QFHFHWGSLDGQGSEHTVDKKKYAAELHLVHWNTKYGDFGKAVQQPDGLAVLGIFLKVGS
AKPGLQKVVDVLDSIKTKGKSADFTNFDPRGLLPESLDYWTYPGSLTTPPLLECVTWIVL
KEPISVSSEQVLKFRKLNFNGEGEPEELMVDNWRPAQPLKNRQIKASFK

>gi568815590f:85365271_85580786|GENSCAN_predicted_CDS_7|1230_bp
atggggacaggggacgaaaggcgccgggggtccgggtcccgagcagtccccgccgccgcc
agactccgcagccgggagggggatggggtgcgcgtagaggctccgcggcccgggttggac
ggaggagcccaggagccaccgcagccgccgcacgcccagagctccgagcttcgctgccag
cccaggacaccggggccctgccgtccacccgagccccctcccccgggccgcccccgagca
cgaagttggcgggagcctataaaagctggtgccggcgcgacccgcggacacacagtgcag
gcgcccaagccgccgccgccagatcggtgccgattcctgccctgccccgaccgccagcgc
gaccatgtcccatcactgggggtacggcaaacacaacgatctggttcttcggagccagcg
gagcagaggagcatgcgtctggcgcacctagcgcatctttggagggtgtggggcttccca
ggacctgagcactggcataaggacttccccattgccaagggagagcgccagtcccctgtt
gacatcgacactcatacagccaagtatgacccttccctgaagcccctgtctgtttcctat
gatcaagcaacttccctgaggatcctcaacaatggtcatgctttcaacgtggagtttgat
gactctcaggacaaagcagtgctcaagggaggacccctggatggcacttacagattgatt
cagtttcactttcactggggttcacttgatggacaaggttcagagcatactgtggataaa
aagaaatatgctgcagaacttcacttggttcactggaacaccaaatatggggattttggg
aaagctgtgcagcaacctgatggactggccgttctaggtatttttttgaaggttggcagc
gctaaaccgggccttcagaaagttgttgatgtgctggattccattaaaacaaagggcaag
agtgctgacttcactaacttcgatcctcgtggcctccttcctgaatccttggattactgg
acctacccaggctcactgaccacccctcctcttctggaatgtgtgacctggattgtgctc
aaggaacccatcagcgtcagcagcgagcaggtgttgaaattccgtaaacttaacttcaat
ggggagggtgaacccgaagaactgatggtggacaactggcgcccagctcagccactgaag
aacaggcaaatcaaagcttccttcaaataa

>gi568815590f:85365271_85580786|GENSCAN_predicted_peptide_8|180_aa
MMPGPQAVLSVKAKWGLRCGSTRETMTWRPVVWGKFSALVTGCLEIDSVLLGGHGGANII
LNEEKLKAFHLRTGTRQGCPLSPLLLNLVLEVLARAIRQEKEIKGILIGEGEVKLSLFAD
DMIVYLKIPKDTSKKPLELIKEFRKVSGCKINIHKSVTLLYTNSNQAENQIEISQPLHNS

>gi568815590f:85365271_85580786|GENSCAN_predicted_CDS_8|543_bp
atgatgcctggaccccaagctgtcctcagtgtgaaggccaaatggggcctgcgctgtggg
agcactcgagagacaatgacgtggaggcctgtggtctggggcaagttctcagccctggtc
actggctgcctggaaatagactcggtgctgctggggggtcacggtggggccaacattata
ctgaatgaggaaaagttgaaagctttccacctgagaactggaacaagacaaggatgccca
ctttcaccacttctgttaaacttggtactggaagtcctcgccagagcaatcagacaagag
aaagaaataaagggcatcctaatcggtgaaggggaagtcaaactgtcactgtttgctgat
gatatgatcgtatacctaaaaatccctaaagacacctccaaaaagccactagaactgata
aaagaattcaggaaagtttcaggatgcaagattaatatacacaaatcagtaactctgcta
tacaccaacagcaaccaagctgagaatcaaattgagatatctcaacctcttcacaatagc
taa

>gi568815590f:85365271_85580786|GENSCAN_predicted_peptide_9|92_aa
MATTLTELIAQQRFESAMVENSFYVSSTILGTGNPEAGCCHSLLDVRQANFGENLVYSLN
DNRPSQKLNYPCKTKERPQSYKDERVLNSTTM

>gi568815590f:85365271_85580786|GENSCAN_predicted_CDS_9|279_bp
atggctactaccctcacagagctgattgcccagcaaaggtttgaaagtgctatggtggag
aacagcttctatgtgtcaagcactatactaggcactgggaatccagaggctggctgttgt
cactcactcctggacgtacgccaagctaactttggggaaaatttagtttatagtttaaat
gataataggccttcccaaaaactaaactacccttgtaaaactaaagaaaggccacaaagt
tacaaggatgagagggtcctgaactctactacaatgtag

>gi568815590f:85365271_85580786|GENSCAN_predicted_peptide_10|85_aa
MTPKYSSGEKQYFELSDDLNVFYYGSRLKGLNGKRMDGCTAALVDAECPLGDTISNGPSV
LFQCPDHPPVASNPQTSFFLIEDLS

>gi568815590f:85365271_85580786|GENSCAN_predicted_CDS_10|258_bp
atgactcctaaatattcttctggggaaaagcaatattttgaactgagcgacgatttaaat
gttttctactatggaagcaggctgaagggcttgaatgggaagaggatggatggttgcacg
gctgccctggtagatgctgaatgtcctctgggtgataccattagtaatggtccatctgtt
ctcttccagtgccctgatcaccctcctgtggccagtaatcctcaaacctcattttttctt
attgaggatttaagctga

>gi568815590f:85365271_85580786|GENSCAN_predicted_peptide_11|191_aa
MVVSEETILKKILKEGPLKKTRVFKGQARVQEHVNVSGELACLGQLKSFCKRAEETSERD
SNLTKGFRYKGLDSGMAPHSCSKSIHPRRGPRQKCGCHLGSPVFVPNINLVNKVLSQICP
LLTMPTLTPPIQLLIRNPEVFQDLTASESMKIKTDTPEDPWQLFLKGFSGLSLLKWGSEE
PEFWNDYSRRL

>gi568815590f:85365271_85580786|GENSCAN_predicted_CDS_11|576_bp
atggttgtctctgaagagacaatcttaaagaagatccttaaagaaggtcccttaaagaag
accagggtctttaagggacaagccagggttcaagagcacgtgaatgtgtctggggaactt
gcctgcctgggccagctaaaatctttttgcaagagggctgaagaaacttccgagagagac
tccaatcttaccaaaggattcagatacaagggacttgactcaggaatggctccacattca
tgcagcaaatccatccatccacgcaggggcccaagacagaaatgtggatgccatcttggt
tcccctgtttttgttcccaacatcaacttggtaaataaggttctcagtcaaatctgccca
cttctcaccatgcctaccctgactcctccgattcagttactgatcagaaatcctgaggtg
ttccaagatctaacagcttccgaaagcatgaaaattaagactgacactccggaggatcct
tggcagctcttcctcaaaggcttctctgggctttcgcttcttaagtggggaagtgaagaa
ccagaattctggaatgattattcacgaaggctctga