GENSCAN 1.0	Date run:  6-Nov-116	Time: 10:01:27

Sequence gi568815594f:123301592_123502548 : 200957 bp : 40.32% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3159   3258  100  2  1   44   58   143 0.519   7.40
 1.02 Intr +   6895   7094  200  2  2   21   53   157 0.276   3.65
 1.03 Term +  12297  12473  177  2  0   64   54   157 0.989   6.60
 1.04 PlyA +  13504  13509    6                               1.05

 2.02 PlyA -  13787  13782    6                               1.05
 2.01 Sngl -  31502  30774  729  2  0   59   49   232 0.978  12.37
 2.00 Prom -  32594  32555   40                              -4.85

 3.04 PlyA -  32930  32925    6                               1.05
 3.03 Term -  34149  33818  332  1  2   69   54   249 0.847  13.43
 3.02 Intr -  35604  35495  110  2  2   31   60    78 0.430  -1.69
 3.01 Init -  38434  38295  140  1  2  111   64    89 0.493   8.54
 3.00 Prom -  44565  44526   40                              -5.35

 4.05 PlyA -  44662  44657    6                               1.05
 4.04 Term -  47007  46675  333  0  0   93   41   137 0.834   3.13
 4.03 Intr -  48413  48234  180  2  0  -49   99   168 0.888   3.34
 4.02 Intr -  48763  48623  141  1  0   33   81    81 0.352   1.53
 4.01 Init -  50553  50341  213  0  0   85   43   128 0.689   6.89
 4.00 Prom -  60519  60480   40                              -5.25

 5.00 Prom +  60576  60615   40                              -3.65
 5.01 Init +  61589  61647   59  1  2   41  100    52 0.126   2.53
 5.02 Intr +  76299  76421  123  0  0   93   83    55 0.045   4.28
 5.03 Intr +  95569  95702  134  1  2   27  -22   179 0.444   0.17
 5.04 Intr +  96020  96132  113  0  2   97   26   137 0.835   7.58
 5.05 Intr +  96443  96639  197  1  2   83   30   199 0.830  10.89
 5.06 Intr +  97175  97339  165  2  0   13   15   177 0.262   1.05
 5.07 Intr +  99946 100889  944  1  2   92   58   501 0.306  37.36
 5.08 Term + 101090 101229  140  0  2   82   38   117 0.598   3.24
 5.09 PlyA + 102610 102615    6                               1.05

 6.00 Prom + 128129 128168   40                              -5.45
 6.01 Init + 129569 129683  115  1  1   64   65    63 0.412   2.03
 6.02 Intr + 132689 132844  156  0  0   78  113   176 0.883  18.16
 6.03 Term + 133053 133168  116  1  2   99   43    36 0.045  -2.05
 6.04 PlyA + 133179 133184    6                              -3.64

 7.05 PlyA - 133250 133245    6                               1.05
 7.04 Term - 134172 133655  518  1  2   94   37   294 0.125  18.39
 7.03 Intr - 134450 134335  116  1  2   43   85    81 0.023   2.47
 7.02 Intr - 142386 142293   94  1  1  108   45    53 0.012   1.10
 7.01 Init - 149411 149390   22  2  1   73   96    25 0.679   1.75
 7.00 Prom - 153617 153578   40                              -6.35

 8.00 Prom + 157332 157371   40                              -5.75
 8.01 Sngl + 159142 159336  195  0  0  104   47   291 0.992  21.51
 8.02 PlyA + 159579 159584    6                               1.05

 9.03 PlyA - 160411 160406    6                               1.05
 9.02 Term - 166463 166337  127  1  1   86   38    62 0.169  -2.23
 9.01 Init - 179878 179499  380  1  2   93   77   193 0.736  15.12
 9.00 Prom - 180530 180491   40                              -8.35

10.07 PlyA - 181286 181281    6                              -1.75
10.06 Term - 181633 181413  221  2  2   29   44   211 0.350   7.02
10.05 Intr - 193423 193315  109  1  1   33  111    38 0.007  -0.46
10.04 Intr - 194530 194353  178  0  1   54   97    71 0.034   3.60
10.03 Intr - 195303 195197  107  0  2   -1   60   137 0.027   0.09
10.02 Intr - 197761 197675   87  1  0   68   88    65 0.106   3.75
10.01 Init - 199556 199521   36  2  0  112  100    29 0.583   6.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 195150 195346  197  1  2  138   40   176 0.878  14.39


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:123301592_123502548|GENSCAN_predicted_peptide_1|158_aa
MQNSGGSSQAAVTERRDSISANTWIQCAAAEKGPAALDSHRCGNPIVNCACEGSRLCTPY
ESLMPDDLRWNGFILKPPALLRPLSMERLSSTKPVPGAKKIVAVCREAALLALEEDIQAN
LIMKRHFTQALSTVTPRIPESLRRFYEDYQEKSGLHTL

>gi568815594f:123301592_123502548|GENSCAN_predicted_CDS_1|477_bp
atgcagaacagcgggggcagcagccaggctgccgtgaccgagcgcagagacagcatctct
gccaatacgtggattcagtgtgcagctgcagaaaaaggaccggcggcattagattctcat
aggtgtgggaaccctattgtgaactgtgcatgtgagggatccaggttgtgcactccttat
gagagtctaatgcctgatgatctgagatggaacggattcatcctgaaaccacccgcactc
ctccgccccctgtccatggaaagattgtcttccacgaaaccagtccctggtgctaaaaag
attgtagctgtctgcagagaggcagctcttctggctctggaagaagacattcaagccaat
ctcatcatgaaaagacatttcactcaggccttgagcactgtgacacctagaattcctgag
tcattgagacgtttttatgaagattatcaagagaagagtgggctgcatacactctga

>gi568815594f:123301592_123502548|GENSCAN_predicted_peptide_2|242_aa
MNIDAKILNKILANQIQQHIKKLIHHDQVGFIPGMQGWFNIYKSINVIYHINRTKDKNHI
IISIDTEKALDKTQHPFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKPEAFPLKT
SRRQGCPLSPLLFNIVLEVLDRAIRQEKEIKGIRIGREEVRLSLFADDMIVYLETPIVSA
QKLLKLISNFSKVSGYKINVQKSQALLYINNSQTESQIMSELPFTIATKRIKYLGIQLTR
AT

>gi568815594f:123301592_123502548|GENSCAN_predicted_CDS_2|729_bp
atgaacattgatgcaaagatcctcaataaaatactggcaaaccaaatccagcagcacatc
aaaaagcttattcaccatgatcaagttggcttcatccctgggatgcaaggctggttcaac
atatacaaatcaataaatgtaatttatcacataaacagaaccaaagacaaaaaccacatc
attatctcaattgatacagaaaaggcccttgataaaactcaacacccctttatgctaaaa
actctcaataaactaggtattgatgggacgtatctcaaaataataagagctatttatgac
aaacccacagccaatatcatactgaatgggcaaaagccagaagcattccctttgaaaacc
agcagaagacaaggatgccctctctcaccactcctatttaacatagtattagaagttctg
gacagggcaatcaggcaagagaaagaaataaagggtattcgaataggaagagaggaagtc
agattgtctctgtttgcagatgacatgattgtatatttagaaacccccattgtctcagcc
caaaaactccttaagctgataagcaacttcagcaaagtctcagggtacaaaatcaatgtg
caaaaatcacaagcattactatacatcaataatagtcaaacagagagccaaataatgagt
gaactcccattcacaattgctacaaagagaataaaatacctaggaatacaacttacaagg
gcaacttga

>gi568815594f:123301592_123502548|GENSCAN_predicted_peptide_3|193_aa
MATSQALERDLLGPVEGSLGSTSSPSSGFSVKHRLLFVPFDAFLKAIMGVLLAGIKTTLG
DLARWLNRNSSSRQLPVRPMQNAGSQLFASKGTNWKKNEFDKFIEGGFKRWVITNSSELK
DHVLTQCKETKNLDKRLKEFLTSITSLEKNINDLMELENTAQELREAYTSINSRINQAKE
SISEIEDELNEIK

>gi568815594f:123301592_123502548|GENSCAN_predicted_CDS_3|582_bp
atggccacctcacaggctctggagagggacttgctgggcccagtggaaggcagcttaggc
tccacatcctctccgtcttccggcttctctgtgaagcacaggttattgtttgtacccttt
gatgcttttctaaaggctataatgggtgttctattagcaggcataaaaacaacattaggg
gatctggcaagatggctgaatagaaacagctccagtcggcagctcccagtgagaccaatg
cagaatgcaggatcacaactctttgccagcaagggaacaaactggaagaagaacgagttt
gacaaattcatagaaggaggcttcaaaaggtgggtaataacaaactcctctgagctaaag
gatcatgttctaacccaatgcaaggaaactaagaaccttgataaaagattaaaggaattt
ctaactagcataaccagtttagagaagaacataaatgatctgatggagctggaaaacaca
gcacaagaacttcgtgaagcgtacacaagtatcaatagccgaatcaatcaagcaaaagaa
agtatatcagagatagaagatgaacttaatgaaataaagtga

>gi568815594f:123301592_123502548|GENSCAN_predicted_peptide_4|288_aa
MGQTHGFCQVLFLREHGRLLSMGTGGAGAGSVTVRGSPQPRPATSLGYLEISHGGSIYAA
EMAARHSPALRKCRLVEQRNTHALLFCNQALTEAFRCGAYKIRLIDSLTSPCSVTTLPGG
YRSSSLKKQLGLVLGEKQNKTVTVKVPEKRDEADGGSSFNSMVRIKLVHTQRCFENYLEQ
SSKCSESGSHLGRLYSASSGDKYVWTRQGSYYSIWKVYGSSEHHYPMKFPCSDFLLMKQP
YDDNFWLPMQLSHEESVLISHYDRMAAHDVSILTREQSSHSSLYIKLV

>gi568815594f:123301592_123502548|GENSCAN_predicted_CDS_4|867_bp
atggggcagacgcatgggttctgccaggtgctgtttctcagggaacacgggaggctgttg
tctatggggacgggtggggctggagcaggctctgtgacagtcagaggctctccccaaccc
cggccagcgacctcccttgggtaccttgaaatcagccacggcgggagtatttacgccgcg
gagatggcagcacgacacagccctgctttgcggaaatgtcgtcttgtagaacaaagaaat
acgcacgccctgctgttctgcaatcaggctctgacagaagctttcaggtgtggtgcttac
aagatcagactcattgactcactcacttctccctgctccgtcactacactcccaggtggg
tatagaagttcaagtttgaagaagcagctaggtctagtgctaggagagaaacagaataag
actgtgacagtaaaggtaccagagaaacgggatgaagcagatgggggaagcagtttcaat
tccatggtgcgaataaaattggtgcacactcagagatgttttgagaactatttggaacag
tcttcaaaatgtagtgaaagtgggtctcacttaggaagactatacagtgcatcttcagga
gacaagtatgtgtggacccgccagggtagttattattctatttggaaagtctatggctct
agtgaacaccactatccaatgaaattcccttgctcagatttcttgctcatgaaacagcct
tatgatgataatttctggcttcctatgcagctttcccatgaagagagtgtactgattagc
cactatgaccgtatggctgcccatgacgtgtctattcttactagagagcaatcatcacat
tctagtttatacatcaaacttgtgtga

>gi568815594f:123301592_123502548|GENSCAN_predicted_peptide_5|624_aa
MPKPRKTSESRENGAKVAKNPMILIADAGVSVRTLCTLLTMFPHCAINSGLLYNISIRPV
SRRLKSETIEFVKHRAVNAFMRRGASTRCVDQMRVCLGIVGDRIPSISAVEPQARRTGCE
RCPGEADLPGPECPGTLCPHLPNEAAIPSFVPCEERLEPEFSEHTVPSAGPSRTRLRHSP
TCFSETWEAFLKGFVKTGSWKGAAEDLPRTGSPPSPITRSGGAVAQVVLSESPSRPRGIS
GGSGDVPGGPLWRSVPQAGGRQRLISDACQVSTDCQNSRSLHMDPQNQHGSGSSLVVIQQ
PSLDSRQRLDYEREIQPTAILSLDQIKAIRGSNEYTEGPSVVKRPAPRTAPRQEKHERTH
EIIPINVNNNYEHRHTSHLGHAVLPSNARGPILSRSTSTGSAASSGSNSSASSEQGLLGR
SPPTRPVPGHRSERAIRTQPKQLIVDDLKGSLKEDLTQHKFICEQCGKCKCGECTAPRTL
PSCLACNRQCLCSAESMVEYGTCMCLVKGIFYHCSNDDEGDSYSDNPCSCSQSHCCSRYL
CMGAMSLFLPCLLCYPPAKGCLKLCRRCYDWIHRPGCRCLTHGFFSFLMDDLQQEWTGKL
HLAPTFNKSLCHPLEGIESQWAFV

>gi568815594f:123301592_123502548|GENSCAN_predicted_CDS_5|1875_bp
atgccaaaaccaagaaagacatctgaaagcagagagaatggagcaaaagttgctaagaac
cctatgattcttattgcagatgctggtgtctccgttaggaccctttgcaccctgctaaca
atgtttccacactgtgctataaactctggtttattgtacaacatctccattagaccagta
agtagacgtttaaagtctgaaacgatcgaatttgtgaaacacagagccgttaatgccttt
atgcgaagaggggctagcactcggtgtgtggaccaaatgcgtgtttgtttaggcattgtt
ggcgaccgaatcccgagcatttcggccgtggaaccccaggctcggaggactgggtgtgag
cgctgcccgggagaggctgacctgccgggaccggagtgcccggggacgctgtgcccccac
ttgcccaacgaagccgccatcccttccttcgttccttgcgaggagcgactagaacccgag
ttctctgagcacaccgtgccgtcagctggcccgtcacgcactcgactccgccactcccct
acttgtttttctgagacttgggaagccttcctgaaaggatttgtaaaaactggttcttgg
aaaggggctgcagaagacctcccgaggacagggtctcctccatccccgattacccggagc
ggcggcgcggtggcccaggttgtcctctcggagagcccttcacgcccaagggggatttca
ggcggctctggggatgtccccggaggccctctttggaggagtgtgcctcaagcaggggga
cgacaaaggctgatttcagatgcatgccaggtttccactgattgccagaactcgagatca
ctacacatggatccccaaaatcaacatggcagtggcagttcgttagttgtgatccagcag
ccttctttggatagccgtcagagattagactatgagagagagattcagcctactgctatt
ttgtccttagaccagatcaaggccataagaggcagcaatgaatacacagaagggccttcg
gtggtgaaaagacctgctcctcggacagcaccaagacaagaaaagcatgaaaggactcat
gaaatcataccaattaatgtgaataataactacgagcacagacacacaagccacctggga
catgcagtactcccaagtaatgccaggggccccattttgagcagatcaaccagcactgga
agtgcagccagctctgggagcaacagcagtgcctcttctgaacagggactgttaggaagg
tcaccaccaaccagaccagtccctggtcataggtctgaaagggcaatccggacccagccc
aagcaactgattgtggatgacttgaagggttccttgaaagaggacctgacacagcacaag
ttcatttgtgaacagtgtgggaagtgcaagtgtggagaatgcactgctcccaggacccta
ccatcctgtttggcctgtaaccggcagtgcctttgctctgctgagagcatggtggaatat
ggaacctgcatgtgcttagtcaagggcatcttctaccactgctccaatgacgacgaaggg
gattcctattcagataatccttgctcctgttcacaatcacactgctgctctagatacctg
tgtatgggagccatgtctttatttttaccttgcttactctgttatcctcctgctaaagga
tgcctgaagctgtgcaggaggtgttatgactggatccatcgcccagggtgcagatgtcta
actcatggatttttctctttcctcatggatgatcttcagcaagagtggactgggaagctg
cacctggctcccactttcaacaagagcctctgccatccacttgagggtattgagagccag
tgggcttttgtgtag

>gi568815594f:123301592_123502548|GENSCAN_predicted_peptide_6|128_aa
MPCCCCCFFHFILKLHYPVAPHLLREPVQKTVGSHQQQATPGMAQPASTLGAGVWMRGMW
QRPKTQRCQCVRNWQVLGLTDLKNEAVDPHGEFVVLLASGVKLQTFTVSVTAHKSSANPK
SEQQQNLL

>gi568815594f:123301592_123502548|GENSCAN_predicted_CDS_6|387_bp
atgccctgctgctgctgctgcttctttcatttcatcctcaaactgcactacccagtagca
ccccacctcttaagagagcccgtgcagaaaacagttggatctcatcaacagcaggctact
ccaggtatggcacaaccagcttccacattgggcgctggtgtctggatgagggggatgtgg
cagcgcccaaaaactcagagatgccagtgtgtccgaaattggcaggttcttggtctcact
gacttgaagaatgaagccgtggaccctcacggtgagtttgtggtcttgctggcctcagga
gtgaagctgcaaaccttcacggtgagtgttacagctcataaaagcagtgcaaacccaaaa
agtgagcaacagcaaaatttgttgtaa

>gi568815594f:123301592_123502548|GENSCAN_predicted_peptide_7|249_aa
MAVGPRAGATSAAPLPSPITNLLASRVFSLVLIEAPLNGQWDQMSVTLPGGSDLQTGLLE
WDSLSKSCNTPCGSTIAGRCGGRGVGGNRGCTQHSRASASSRWAWARQAGTRSGWQALPT
PGSEGLSTWASSCRGGTRSPSTAGWPAPHSNSRRASAACLRCRARDLQPAMPKPPSLPCL
VGSHTTQASPTGADPCSTMPGPIDHPRAEECRCAAQDWQAAPPTALVGDPLGEASWAPES
GWDLENFYA

>gi568815594f:123301592_123502548|GENSCAN_predicted_CDS_7|750_bp
atggctgtaggacccagagcaggagctacttctgctgcaccactcccttcccccatcacc
aatcttctggcttccagagtcttttcacttgttcttattgaagcacctttgaatgggcag
tgggaccaaatgagtgtgacacttcctgggggctcagatcttcagactggactccttgag
tgggactccctgagcaaaagctgtaacaccccttgtggctccaccattgctgggaggtgt
ggagggagaggcgtgggtggcaaccggggctgcacgcagcactcgcgggccagcgcgagt
tccaggtgggcgtgggctcggcaggctggcactcgtagtggctggcaggcgctgcccacc
ccaggcagtgaggggcttagcacctgggccagcagctgcagagggggcaccaggtccccc
agcactgccggctggcctgcgccacactcgaattctcgccgggcctcagctgcctgcctg
cgatgcagggctcgggacctgcagcctgccatgcccaagcccccctcccttccctgcctg
gtgggctcccacacaacccaagcctccccgacgggcgctgacccctgctccaccatgccc
ggtcccatcgaccacccaagggctgaggagtgcaggtgtgcagcccaggactggcaggcg
gctccgcccacggccctggtcggggatcctctaggcgaagccagctgggctcctgagtcg
ggttgggacttggagaacttttatgcctag

>gi568815594f:123301592_123502548|GENSCAN_predicted_peptide_8|64_aa
MDVFLRRVTPPQEEPQAGPSGGVPEEGIVIIGDDSSMRVIAPEDLPVEQHVEVENSDIDD
LVPV

>gi568815594f:123301592_123502548|GENSCAN_predicted_CDS_8|195_bp
atggatgtatttctgagaagagtgacacctcctcaagaagagcctcaggcaggtccttca
ggtggtgttccagaagaaggcattgttatcataggagatgacagctccatgcgtgttatt
gcccctgaagaccttccagtggaacagcatgtggaggtggaaaatagtgatattgatgac
cttgttcctgtgtag

>gi568815594f:123301592_123502548|GENSCAN_predicted_peptide_9|168_aa
MDIRSRLLQAACQEHQGVINTQQCSDENLAFLESTLASSPRELLYDNRRLLCSSPSCRRL
CCGLFPMYMIQSSLPSTSVAAKAPPLMSYAQVIHFLPSPLCSSRAHFSPNRQHENKERNL
TFSERGRVVEHTTSGLSKMKLTHLHLTLAAAKYLSSSLKSSTHFLQLL

>gi568815594f:123301592_123502548|GENSCAN_predicted_CDS_9|507_bp
atggatatcagaagtaggcttctccaagcagcatgtcaagaacaccagggtgttataaac
acacaacagtgcagcgatgagaacctggcttttctggagtccacactggcctcttctcca
agggagctgctgtatgacaacagacggctgctgtgttcctcaccttcttgtcgtaggctc
tgctgtggtttattccccatgtatatgattcagagctccttaccaagcacctctgtggca
gccaaggctccaccactgatgagttatgcccaagttattcactttcttccatctccatta
tgctcaagcagagcccatttcagccccaacaggcaacatgagaacaaggaaaggaatcta
acatttagtgagagaggcagagttgtagaacatactacctcgggtttaagcaagatgaag
ctcactcaccttcacttgacccttgctgctgctaaatatttgtcttcatctctcaaatcc
tctacacacttcctacaactactctaa

>gi568815594f:123301592_123502548|GENSCAN_predicted_peptide_10|245_aa
MTTQNSKVEVNKFLICKQQKINIEPLIEQPDHEGTRQSSGKDIRSSGKDSGPSGSSGQLL
ASSPVSGFPRKRTRKRSDNSPTVAITSSQWDICVAGLGRDAYIQHSEACVSYLQHTSGYN
ATTVHFQFASRSRVTQSHREAITTLQISEYQCQVETALERLGVPLSSVYVLPVWKLLHNR
LAESLHGRRLGVDVECEAYSLEAFVHKCTGKVAQQTETARTSQRFSRGAAACRQAFENYS
KCLEL

>gi568815594f:123301592_123502548|GENSCAN_predicted_CDS_10|738_bp
atgaccacacagaactcgaaggtggaagtgaacaagtttctaatctgcaagcagcagaaa
atcaatattgagcctttaatagagcaacctgaccatgaaggaactaggcagtcatcaggt
aaggatatcagatcttctggcaaggacagtggcccatctggttcttctgggcagctgcta
gcatcaagtcctgtttcaggtttccccaggaagcggactcgaaaacggagtgacaatagt
cctactgtggccattacaagctcccagtgggatatctgtgttgcaggattgggtagagat
gcatacattcagcactcagaagcctgtgtgagctaccttcagcacacctctggctataat
gcaaccactgtacattttcagtttgcatcacgttccagggtgactcagtctcacagggaa
gccataacaactcttcaaatttctgagtatcaatgtcaagttgaaacagctcttgaaagg
ttgggtgttcccctttcctcggtgtatgttcttccagtgtggaaacttctacacaatcgt
cttgcagagtcacttcacgggagaagacttggggtagatgtggagtgtgaagcctattct
ctggaggcatttgtacacaaatgcacaggcaaggttgcacagcagactgagacagcgaga
acttctcagaggttctcaagaggtgcagcagcttgcagacaagcttttgaaaattactcc
aagtgtttggagctgtag