GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:32:14

Sequence gi568815597r:211379039_211581415 : 202377 bp : 44.14% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12602  12659   58  1  1   79   97    73 0.972   8.77
 1.02 Intr +  12789  12938  150  1  0   62   95    55 0.763   3.73
 1.03 Term +  13814  13824   11  0  2  129   33     7 0.719  -2.34
 1.04 PlyA +  15520  15525    6                               1.05

 2.05 PlyA -  15789  15784    6                               1.05
 2.04 Term -  16047  16003   45  0  0   63   48    94 0.053   0.11
 2.03 Intr -  25057  24842  216  1  0   12   86   104 0.032   1.30
 2.02 Intr -  26079  25832  248  1  2   39   41   185 0.026   6.08
 2.01 Init -  28367  28067  301  2  1   88  -19   239 0.065  10.61
 2.00 Prom -  30310  30271   40                              -6.66

 3.00 Prom +  36050  36089   40                              -3.36
 3.01 Sngl +  37498  38646 1149  0  0   78   38   756 0.855  63.94
 3.02 PlyA +  39099  39104    6                               1.05

 4.00 Prom +  45716  45755   40                              -5.16
 4.01 Sngl +  75639  76385  747  2  0   58   43   270 0.770  15.69
 4.02 PlyA +  76611  76616    6                               1.05

 5.00 Prom +  76774  76813   40                             -10.74
 5.01 Sngl +  76873  77910 1038  0  0   45   47   319 0.646  20.63
 5.02 PlyA +  78060  78065    6                               1.05

 6.10 PlyA -  80024  80019    6                               1.05
 6.09 Term - 100289  99998  292  1  1   80   46   579 0.999  47.72
 6.08 Intr - 102321 102082  240  2  0   33   99   308 0.081  23.06
 6.07 Intr - 106406 106288  119  2  2  111   53    74 0.068   5.46
 6.06 Intr - 109538 109517   22  1  1   76   94     3 0.014  -2.75
 6.05 Intr - 120402 120348   55  1  1   96   89     4 0.050  -0.66
 6.04 Intr - 123134 122989  146  1  2  102   34   114 0.147   7.33
 6.03 Intr - 127129 127095   35  1  2   46  110    21 0.040  -2.88
 6.02 Intr - 135302 135170  133  1  1   88   56    94 0.534   6.85
 6.01 Init - 137686 137562  125  1  2  104   69    65 0.752   4.79
 6.00 Prom - 143891 143852   40                              -3.76

 7.00 Prom + 146678 146717   40                              -6.86
 7.01 Init + 147575 147643   69  1  0  108   77    57 0.700   5.70
 7.02 Intr + 151715 151834  120  1  0   61   99    23 0.380   1.39
 7.03 Term + 152986 153198  213  0  0  124   37    51 0.819   0.83
 7.04 PlyA + 157237 157242    6                               1.05

 8.04 PlyA - 157400 157395    6                              -0.45
 8.03 Term - 159466 159354  113  2  2  134   49    84 0.864   7.82
 8.02 Intr - 164114 164042   73  2  1   97   47    16 0.337  -2.62
 8.01 Init - 168088 167894  195  1  0  110   75   127 0.610  12.53
 8.00 Prom - 192920 192881   40                              -3.96

 9.04 PlyA - 196019 196014    6                               1.05
 9.03 Term - 196862 196350  513  2  0   28   47   181 0.540   2.34
 9.02 Intr - 198785 198685  101  0  2   96   43    35 0.326  -0.37
 9.01 Init - 199574 198953  622  2  1  110   99  1171 0.849 113.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  28367  28038  330  2  0   88   44   249 0.869  16.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:211379039_211581415|GENSCAN_predicted_peptide_1|72_aa
MDKKSTHRNPEDARAGKYEGKHKRKKRRKQNQNQHRSRHRSVTSFSSDDPMFPSSSSSSS
GSQTDSSIEGFQ

>gi568815597r:211379039_211581415|GENSCAN_predicted_CDS_1|219_bp
atggataagaagtccactcacagaaatcctgaagatgccagggctggcaaatatgaaggt
aaacacaaacgaaagaaaagaagaaagcaaaaccaaaaccagcaccgatcccgacataga
tcagtgacgtctttttcttcagatgatcctatgtttccttcttcctcatcatcgtcttca
ggaagccagacagattcaagtattgaaggttttcagtag

>gi568815597r:211379039_211581415|GENSCAN_predicted_peptide_2|269_aa
MGIKQSRKTGNSKNQSLSPSPMERSSSPATEQSWMENDFDKLREEVFRRSNYSELKEEVQ
TNGKEVKNFEKNLDKWITRIINGEKSLKYLMELKTTARELQIQTTIREYYKHLYANKLEN
LEEMDKFLDTYTFPRLNQEEVESLNRPITDSEIEAIINSPPTKKNPGPDGLTAKSYQRYK
EELTESQIMSELPFTIATKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCS
WIGRINIMKMATLPKANRMTDDDRNPTGD

>gi568815597r:211379039_211581415|GENSCAN_predicted_CDS_2|810_bp
atggggataaaacagagcagaaaaaccggaaactctaaaaatcagagcctctctccttct
ccaatggaacgcagctcctcaccagcaacggaacaaagctggatggagaatgactttgac
aagttgagagaagaagttttcagaagatcaaactactccgagctaaaggaggaagttcaa
accaatggcaaagaagttaaaaactttgaaaaaaacttagacaaatggataactagaata
atcaatggagagaagtccttaaagtacctgatggagctgaaaaccacggcacgagaacta
caaatacaaactaccatcagagagtactataaacatctctacgcaaataaactagaaaat
ctagaagaaatggataaattccttgacacatacaccttcccaagactaaaccaggaagaa
gttgaatccctgaatagaccaataacagactctgaaattgaggcaataattaatagccca
ccaaccaaaaaaaatccaggaccagatggattgacagccaaatcctaccagaggtacaag
gaggagctgacagagagccaaatcatgagtgaactcccattcacaattgctacaaagaga
ataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactac
aaaccactgctcaacgaaataaaagaggacacaaacaaatggaagaacattccatgctca
tggataggaagaatcaatatcatgaaaatggccacactgcccaaggcaaacagaatgacg
gatgatgatcgaaacccaaccggggactag

>gi568815597r:211379039_211581415|GENSCAN_predicted_peptide_3|382_aa
MHPDATDSGGAGLSPARAAGAGGRPVSGFRGERRPESPGDAEAAAAAPGAPGGRSWWKPV
AVAALATVALSFLGPGSGEAAGAAGLSSVLLRLSLYLSCAAATFLLGTLFALVCRSPRAP
PPDFAAAWSRLAATSAARRPPGSPVYGNSHESAQFRRVVISHNMDKVLKEVFDYSYRDCI
LSWYGNLSRDEGQLYHVLLEDFWEIARQLHHRLSHVDVVKVVCNDVVRTLLTHFCDLKGA
NARHEQPRPFVLHVCLRNSDDEVRFLQTCSRVLVFCLLPSKDVQSLSLPIMLAEILTTKV
LKPVVELLSNPDYINQMLLAQLEYREQMNEHHKRAYTYSPSYEDFIKLINSNSDVEFLKQ
LRSVEGTVEKSGRRCVLVVFNN

>gi568815597r:211379039_211581415|GENSCAN_predicted_CDS_3|1149_bp
atgcaccccgatgcgaccgacagtggcggcgccggcctcagccccgcgcgggccgcaggc
gccggcggccgtcctgtctcgggcttcaggggcgagcggcggccagagtccccgggggac
gccgaggcagcagcggcggcgccgggggccccgggcggccggagctggtggaagcccgtg
gcggtggccgcacttgccaccgtggccctctccttcctggggcccggcagcggggaggcg
gcgggggccgcggggctgagctccgtcctgctcaggctcagcctgtacctgagctgcgct
gcggccaccttcctgctggggaccctgttcgccctcgtctgccggagcccgcgcgccccg
ccgcccgactttgccgccgcctggagccggctggccgcgacctcagccgcccgccgccct
cctgggagtcctgtgtatggaaactcacatgagtcagctcagtttagaagggtagtaatt
tctcataatatggataaagttctgaaagaagtgttcgactacagttacagagattgcatt
ctgtcctggtatggaaacctcagcagagatgagggacaactttaccatgtgctcttggaa
gacttttgggaaattgccagacagctgcaccacagactgagtcacgtggatgtggttaaa
gttgtctgcaatgatgttgtgaggactttactcactcatttctgtgacctgaaaggtgct
aatgccagacatgaacagccaagaccttttgtgttgcacgtatgcttgaggaactcagat
gatgaagtaagatttctacaaacgtgttctcgggttctggtgttttgtctcctcccctca
aaggatgtgcagtctctcagtttacctataatgcttgcagaaattctcacaacaaaagtc
ctgaagccggtagtggagttactgagtaatccagattacattaaccaaatgctgcttgcc
cagctggagtacagagagcagatgaatgaacatcacaagagagcctacacctatagcccc
tcttatgaggacttcatcaagctcattaacagcaactctgatgtggagttcttgaagcaa
ctaaggtctgttgaaggaacggtagagaagagtggtagaagatgtgtgctggtcgttttc
aacaactga

>gi568815597r:211379039_211581415|GENSCAN_predicted_peptide_4|248_aa
MELKNMARELRDECTSFSSRFDQLEERVSVIEDQMSETKQEEKFREKRIQRNEQSLQEIW
DYVKRPNLHLIGVPESDGMNGTKLENTLQDIIQENFPNLARQANIQIQEIQRTPQRYSSR
KATPRHIIVRFTKVEMKEKMLRAARGKGWVTHKGKPIRLTADLLAKTLQARREWGPIFNI
LKGKNFQPRISYPAKLSFISEGEIKSFTDKQMLRDFVTTRPALQELLKEALNMERNNQYQ
PLQKHAKL

>gi568815597r:211379039_211581415|GENSCAN_predicted_CDS_4|747_bp
atggagctgaaaaatatggcacgagaactacgtgacgaatgcacaagcttcagtagccga
tttgatcaactggaagaaagggtatcagtgattgaagatcaaatgagtgaaacgaagcaa
gaagagaagtttagagaaaaaaggatacaaagaaacgaacaaagcctccaagaaatatgg
gactatgtgaaaagaccaaatctacatctgattggtgtacctgaaagtgatgggatgaat
ggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaatctagca
aggcaggccaacattcaaattcaggaaatacagagaacaccacaaagatactcttcgaga
aaagcaactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatg
ttaagggcagccagagggaaaggttgggttacccacaaagggaagcccatcagactaaca
gcagatctcttggcaaaaactctacaagcaagaagagagtgggggccaatattcaacatt
cttaaaggaaagaattttcaacccagaatttcgtatccagccaaactaagcttcataagt
gaaggagaaataaaatcatttacagacaaacaaatgctgagagattttgtcaccaccagg
cctgccctacaagagctcctgaaggaagcactaaacatggaaaggaacaaccagtaccag
ccactgcaaaaacatgccaaattgtaa

>gi568815597r:211379039_211581415|GENSCAN_predicted_peptide_5|345_aa
MVDFNTPQSTLDRSVRQKVNKDTQELNSTLHQADLIDIYRTLHPKSTEYAFFSAPHHTYS
KTDHIVGSKVLLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNCSTTWKLNKLLLNDYWV
HNEMKAEIKMFFESNETKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
GREKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFEKINKTDRPLARLIK
KKREKNQIDAIKNDKWDITTNPTEIQTTTREYYKHLYANKLENLEEMDKFLDTYTHPRLN
QEEVESLNTPITGSEIEALINSLPTKMESQLNSYRGTRRSWYYSF

>gi568815597r:211379039_211581415|GENSCAN_predicted_CDS_5|1038_bp
atggtagactttaacaccccacagtcaacattagacagatcagtgagacagaaagttaac
aaggatacccaggaattgaactcaactctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaacagaatatgcattcttctcagcaccacatcacacttattcc
aaaactgaccacatagttggaagtaaagtgctcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactc
actcaaaactgctcaactacatggaaactgaacaagctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaatccaatgagaccaaagacaca
acatatcagaatctctgggacacatttaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatctaaaattgataccctaacatcacaattaaaa
ggacgagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaag
atcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaatcaatgaatcc
aggagctggttttttgaaaagatcaacaaaactgatagaccgctagcaagactaataaag
aagaaaagagagaagaatcaaatagatgcaataaaaaatgataaatgggatatcaccacc
aatcccacagaaatacaaactaccaccagagaatactataaacacctctatgcaaataaa
ctagaaaatctagaagaaatggataaattcctggacacatacactcacccaagactaaac
caggaagaagttgaatccctcaatacaccaataacaggctctgaaattgaggcactaatt
aatagcctaccaaccaagatggagtcacagttgaattcttacagaggtacaaggaggagc
tggtactattccttctga

>gi568815597r:211379039_211581415|GENSCAN_predicted_peptide_6|388_aa
MGADLTTLALGCQDSQSGLLSLAAVMASFPGPLHLIQGQYFRVNEACRRLHPPGKDKACE
SLWVCPSDAVGPLGGAAWSGIILDARVCSVTPDFHINRLFGKQKEVKMPSIYLPGKELRT
LVKGTLENLPLPSGNFQQPAWGLTQGESGIWPGPRDRNTTSMASRAFKTSFQNLIGPTEE
PSGGAAGTGDRNSTSRNLVSAKASSPGQSCGKSPAEMVLETLMMELTGQMREAERQQRER
SNAVRKVCTGVDYSWLASTPRSTYDLSPIERLQLEDVCVKIHPSYCGPAILRFRQLLAEQ
EPEVQEVSQLFRSVLQEVLERMKQEEEAHKLTRQWSLRPRGSLATFKTRARISPFASDIR
TISEDVERDTPPPLRSWSMPEFRAPKAD

>gi568815597r:211379039_211581415|GENSCAN_predicted_CDS_6|1167_bp
atgggggcagatttgaccacactggctctgggctgtcaagacagccaatctgggctgctg
tctctggctgctgttatggcttcattcccggggccactccacttaatacagggacagtac
ttcagggtaaatgaggcatgcaggcgcctgcaccctccgggcaaggacaaggcgtgtgag
agtctctgggtctgccccagcgacgccgtcgggcctctgggcggtgcagcctggtccggc
atcatcctggacgcgcgggtgtgctccgtgacacctgacttccacataaacaggttgttt
ggcaagcagaaagaagttaagatgccttcaatttatcttccaggaaaagagctaaggaca
ctggtgaaaggaaccctggagaacctgccgctgccttctggcaatttccagcagccagca
tggggtcttacacagggagagtctggaatttggccagggcccagggatcggaacaccacc
tcgatggcctccagagccttcaagacctctttccagaacttaatcggacccactgaagag
ccttctgggggagcagctggcactggggacagaaatagcaccagcagaaatcttgtttct
gccaaagcctccagtcctggccagagttgcgggaagagccctgctgagatggtgctggag
acgcttatgatggagctgacggggcagatgcgagaggctgagaggcagcagcgggagcgc
agcaatgcggtcagaaaggtctgcaccggtgtggactacagctggctggccagcacaccc
cggtccacctatgacctcagccccattgagcggttgcagctggaagatgtctgcgttaag
atccacccatcctattgtgggcctgctatcctcaggttccggcagctgctggcggagcag
gagcccgaggtgcaggaggtgtcccagctcttccgctcggtgctgcaggaggtcctggag
aggatgaagcaggaagaggaggcccacaagctgacgcgccagtggagcctgcggccccgc
ggcagcctggccaccttcaagacccgcgcgcgcatctcgcccttcgccagcgacatcagg
accatctccgaggacgtggagcgggacacaccgccgccactgcggtcctggagcatgccc
gaattccgggcgcccaaagccgactga

>gi568815597r:211379039_211581415|GENSCAN_predicted_peptide_7|133_aa
MMQDRGTQALALMDSPLLPRTPKCPSMLIFGLCPVLTGGGLTKALGSSQNPWGSVVWTVG
FGQGSLQLLDVWVPQARLCFLSGAGRLLLVSQWPLEHCMGWDLEEGQQVAEGPWDDPGIS
DQSMEGRHWPVAF

>gi568815597r:211379039_211581415|GENSCAN_predicted_CDS_7|402_bp
atgatgcaagacagagggacacaggccttggccctgatggactccccgcttctgcccaga
acccccaagtgcccctcaatgcttatatttggcctttgcccagttctaacagggggtggt
ctcaccaaagccttgggcagcagccagaacccatggggctctgtagtgtggactgtgggc
tttggccagggctccttgcagttattagatgtttgggttccccaagccagattgtgcttc
ctctctggtgcagggcgtcttctgctggtctcccagtggccccttgagcactgcatgggc
tgggatctggaggagggacagcaggttgctgaaggcccttgggatgacccagggatctca
gaccagagcatggagggcagacactggcccgttgccttctag

>gi568815597r:211379039_211581415|GENSCAN_predicted_peptide_8|126_aa
MPGLEEVFKAINLVEIGLILNSQPPTWALEKIGNPKKEPRNTPMFGGQENEEEPAKDTTK
GAASEVPEGQGAQRWQPIVTPIANRMLMKGLSVAPSQKRIPERPCPSGDMDGATSCWAKR
GQPGSK

>gi568815597r:211379039_211581415|GENSCAN_predicted_CDS_8|381_bp
atgcctggcctagaggaggtatttaaagccataaacctggttgaaattggccttattttg
aattcacagccaccaacatgggctcttgagaagataggaaatccaaagaaagaaccccgg
aacactccaatgtttgggggtcaggaaaatgaagaggagccagcaaaggacaccacgaag
ggggcagccagtgaggtgccagaggggcagggagcccagaggtggcagcctattgtgaca
cccattgccaacaggatgttgatgaaaggattgagcgtggctccttctcagaagcggatt
cctgaaaggccctgcccttcaggggacatggatggggccaccagctgctgggcaaagaga
ggacagccaggaagcaagtga

>gi568815597r:211379039_211581415|GENSCAN_predicted_peptide_9|411_aa
MGCWGRNRGRLLCMLALTFMFMVLEVVVSRVTSSLAMLSDSFHMLSDVLALVVALVAERF
ARRTHATQKNTFGWIRAEVMGALVNAIFLTGLCFAILLEAIERFIEPHEMQQPLVVLGVG
VAGLLVNVLGLCLFHHHSGFSQDSGHGHSHGGHGHGHGLPKGPRVKSTRPGSSDINVAPG
EQGPDQEETNTLVANTSNSNGLKLDPAGNQNPLSRVQGAGDASGIFVGGGCGSDPKKKGQ
EESALILLQTVPKQIDIRNLIKELRNVEGVEEVHELHVWQLAGSRIIATAHIKCEDPTSY
MEVAKTIKDVFHNHGIHATTIQPEFASVGSKSSVVPCELACRTQCALKQCCGTLPQAPSG
KDAEKTPAVSISCLELSNNLEKKPRRTKAENIPAVVIEIKNMPNKQPESSL

>gi568815597r:211379039_211581415|GENSCAN_predicted_CDS_9|1236_bp
atggggtgttggggtcggaaccggggccggctgctgtgcatgctggcgctgaccttcatg
ttcatggtgctggaggtggtggtgagccgggtgacctcgtcgctggcgatgctctccgac
tccttccacatgctgtcggacgtgctggcgctggtggtggcgctggtggccgagcgcttc
gcccggcggacccacgccacccagaagaacacgttcggctggatccgagccgaggtaatg
ggggctctggtgaacgccatcttcctgactggcctctgtttcgccatcctgctggaggcc
atcgagcgcttcatcgagccgcacgagatgcagcagccgctggtggtccttggggtcggc
gtggccgggctgctggtcaacgtgctggggctctgcctcttccaccatcacagcggcttc
agccaggactccggccacggccactcgcacgggggtcacggccacggccacggcctcccc
aaggggcctcgcgttaagagcacccgccccgggagcagcgacatcaacgtggccccgggc
gagcagggtcccgaccaggaggagaccaacaccctggtggccaataccagcaactccaac
gggctgaaattggaccccgcaggaaatcagaaccccctcagtcgggtgcaaggagccggc
gacgcgtctggcatatttgtaggtgggggctgtgggtcagaccctaagaaaaagggtcag
gaggaatctgctcttattcttctacaaactgttcctaaacaaattgatatcagaaatttg
ataaaagaacttcgaaatgttgaaggagttgaggaagttcatgaattacatgtttggcaa
cttgctggaagcagaatcattgccactgctcacataaaatgtgaagatccaacatcatac
atggaggtggctaaaaccattaaagacgtttttcataatcacggaattcacgctactacc
attcagcctgaatttgctagtgtaggctctaaatcaagtgtagttccgtgtgaacttgcc
tgcagaacccagtgtgctttgaagcaatgttgtgggacactaccacaagccccttctgga
aaggatgcagaaaagaccccagcagttagcatttcttgtttagaacttagtaacaatcta
gagaagaagcccaggaggactaaagctgaaaacatccctgctgttgtgatagagattaaa
aacatgccaaacaaacaacctgaatcatctttgtga