GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:13:39

Sequence gi568815593r:15967474_16279575 : 312102 bp : 39.56% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7497   7622  126  2  0   82   63    81 0.036   5.21
 1.02 Intr +  38339  38501  163  1  1   63  105   106 0.435   8.43
 1.03 Term +  41422  41639  218  2  2   18   38   287 0.811  13.02
 1.04 PlyA +  42081  42086    6                               1.05

 2.00 Prom +  43807  43846   40                              -4.85
 2.01 Init +  48282  48452  171  2  0   55   85   128 0.871   8.69
 2.02 Intr +  80310  80381   72  2  0   44   96    90 0.167   4.08
 2.03 Term +  83891  84082  192  1  0   48   42   178 0.949   5.64
 2.04 PlyA +  84148  84153    6                               1.05

 3.00 Prom +  86863  86902   40                              -6.15
 3.01 Init +  87833  87898   66  1  0   98   -6   153 0.628   8.02
 3.02 Term +  92782  92871   90  0  0  140   38    39 0.190   0.84
 3.03 PlyA +  96150  96155    6                               1.05

 4.09 PlyA -  96355  96350    6                               1.05
 4.08 Term - 100320  99998  323  1  2   54   48   274 0.990  14.00
 4.07 Intr - 101006 100943   64  2  1   64   98    45 0.742   0.47
 4.06 Intr - 101394 101220  175  2  1   82   61    40 0.590  -0.28
 4.05 Intr - 113056 112927  130  2  1   97   77   104 0.851   9.03
 4.04 Intr - 115794 115487  308  2  2    1   76   231 0.086   8.37
 4.03 Intr - 122778 122662  117  2  0   83   66    95 0.339   5.46
 4.02 Intr - 123532 123416  117  0  0   64   82    69 0.350   2.56
 4.01 Init - 126102 125972  131  0  2   65   11    91 0.149  -1.23
 4.00 Prom - 131865 131826   40                              -5.95

 5.00 Prom + 136019 136058   40                              -4.95
 5.01 Init + 144580 144906  327  0  0   41   39   251 0.229  12.90
 5.02 Intr + 145475 145532   58  1  1  111   91     4 0.213   0.54
 5.03 Term + 153158 153360  203  0  2   74   50   178 0.861   9.17
 5.04 PlyA + 153483 153488    6                               1.05

 6.12 PlyA - 153836 153831    6                               1.05
 6.11 Term - 157723 157586  138  1  0   59   49   129 0.772   3.08
 6.10 Intr - 207757 207587  171  1  0   17   70   163 0.897   6.62
 6.09 Intr - 210408 210253  156  0  0   95  115    53 0.995   7.99
 6.08 Intr - 212154 211566  589  2  1  128  110   452 0.917  43.10
 6.07 Intr - 213252 213172   81  2  0   82   84    46 0.590   1.43
 6.06 Intr - 213408 213278  131  0  2   65   94    48 0.771   1.67
 6.05 Intr - 217119 216904  216  0  0   57   77    94 0.423   2.98
 6.04 Intr - 220340 220140  201  2  0  -16   95   150 0.452   3.86
 6.03 Intr - 223527 223406  122  1  2   86   61    87 0.487   5.09
 6.02 Intr - 224938 224831  108  2  0   60   77    71 0.670   2.54
 6.01 Init - 225234 225165   70  0  1   70   81    47 0.855   3.46
 6.00 Prom - 225582 225543   40                              -6.55

 7.04 PlyA - 225698 225693    6                               1.05
 7.03 Term - 228908 228472  437  0  2   14   33   208 0.493   2.36
 7.02 Intr - 229832 229275  558  0  0  -18   29   397 0.351  15.07
 7.01 Init - 244216 243952  265  1  1   55   37   169 0.026   5.75
 7.00 Prom - 252051 252012   40                              -4.55

 8.00 Prom + 252798 252837   40                              -4.55
 8.01 Init + 262367 262439   73  1  1   56   56   110 0.283   5.88
 8.02 Intr + 267745 267826   82  2  1  122   53    33 0.618   0.98
 8.03 Intr + 277885 278006  122  1  2   48   84    76 0.328   2.42
 8.04 Intr + 280592 280753  162  0  0  100  103    60 0.575   7.73
 8.05 Intr + 295452 295635  184  1  1   84   78    57 0.508   2.22
 8.06 Intr + 297741 297922  182  0  2   58   54   124 0.363   4.59
 8.07 Term + 309117 309211   95  1  2   82   49    82 0.008   0.71
 8.08 PlyA + 310592 310597    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  14042  14250  209  0  2   73   39   160 0.817   6.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:15967474_16279575|GENSCAN_predicted_peptide_1|168_aa
MQQAFSLELTEALKGKKTVKQESYIQQNCPFTVKEKLRHTFSQTPEMKDPETKETSSPGS
ISLTSQDESWEAPATSPKPPHSGMQLELCANVAHQGECEGRICEMLIFIISQWLIEKLEE
NGTAGMEKQFMTDEKEEEEEKKKKKEKEEEEEGEEEEVWGGKKEPPPQ

>gi568815593r:15967474_16279575|GENSCAN_predicted_CDS_1|507_bp
atgcagcaggctttctctttagaactcacagaagctctaaaaggaaaaaaaacagtcaag
caagaatcttatatccagcaaaactgtcctttcacggtgaaggagaaattaagacataca
ttttcacaaacaccagaaatgaaagacccagaaaccaaagaaacatcttctcctggctcc
atctccttgacttctcaggatgaatcctgggaagccccagccacatcaccaaagccacca
cactcaggcatgcaattggagctctgtgcaaatgtggctcatcagggagaatgtgaaggt
aggatttgcgagatgttaatctttataataagccaatggttgattgaaaagttagaagaa
aatgggacagcaggtatggaaaagcagtttatgactgatgagaaggaagaagaggaagag
aagaagaagaagaaggagaaggaggaggaggaggagggagaggaggaagaggtatggggt
gggaagaaagaaccaccaccacagtaa

>gi568815593r:15967474_16279575|GENSCAN_predicted_peptide_2|144_aa
MTDDLEALYDCAGCKTVGQLVWLSTGPSVPVGQSPGYFQPRSEALLRDGFPLAALSLPQI
LGMSTLQDGQLQENKCREEAQNWCYATYESRPQEALTRCLHPLGMLLPLCEEALAEMKRA
HGERPSHASAPTESDSANPPAECS

>gi568815593r:15967474_16279575|GENSCAN_predicted_CDS_2|435_bp
atgactgatgacctggaggctctgtatgactgtgctggctgtaaaactgtggggcaattg
gtctggctgagtactgggccctctgtccctgttgggcagagtcctggctactttcaacct
cgatctgaagctctcctcagggacgggttcccacttgcagctctctctctgccccagata
ttagggatgtccacgctgcaggatggtcagctccaggagaacaaatgcagagaagaggcc
cagaattggtgttatgccacttatgagtcaaggccacaagaggccctgacacgttgtctg
caccctcttggaatgctgctgccactatgcgaagaagctctggctgagatgaaaagagca
catggagagaggcccagtcatgccagtgctccaactgagtcagactcagccaatcctcca
gctgaatgcagctga

>gi568815593r:15967474_16279575|GENSCAN_predicted_peptide_3|51_aa
MAEGEEEAGTSYMADTGGRESEVLVPSMSLSYKVLAAILLLSFGLTHLTAY

>gi568815593r:15967474_16279575|GENSCAN_predicted_CDS_3|156_bp
atggcggaaggtgaagaagaagccggcacttcctacatggctgacacaggaggacgagag
agcgaagtgttggtcccatctatgtccctgtcatataaggttctagcagcaatcttgctc
ctaagctttggactcacacatctgactgcctattag

>gi568815593r:15967474_16279575|GENSCAN_predicted_peptide_4|454_aa
MPYRKWKRMAPQGQCMATRFPGSQETLQPVHPTITSILPNPSIHQCDLAPLVSLQPLCSV
AEEGHPFSDLLWNVWFYGSSVHSTVRKRKPIMQHLCGVCEVHRHRDGDQSARGRAVWVAV
GRAKTTRIQCGLIRDHLHSEDTFSTGSGDHSCQPPTAPCISELYKQSSCTPFKSVINFHQ
KTFITRLLEPKSNHLITTQSPPPLPSLESELLGSLRIAELWKLTEFLGNPSGCGQCAPRF
KGLELRLEVGTGDLYLVVETSVCREMLWIFIDLSTNFSGLSASSKRRALPHFTSPERPSP
GTTFCEGSRIQKPLDNTLKCKCVKCRLYVFEHVSEHPQGLVSLFAKRGLIVHEGAAVYRV
FKRWRAVNLHWDVLNYDKATDIEESSRGESSTSRTLWLPLTALRNRNLVHPTQLTSPRFQ
CGYVLLHLFNRMRPHEDLSEDNSSGEVVMRVTSV

>gi568815593r:15967474_16279575|GENSCAN_predicted_CDS_4|1365_bp
atgccatacagaaaatggaagaggatggcacctcagggtcagtgcatggccactcgattt
cctgggtcccaggaaacactacagccagtgcatccaaccatcacttccatcctgccaaat
ccaagcattcaccagtgtgacttggctcctctggtcagccttcagcccctatgcagtgtg
gcagaggaaggacatcctttttcagatctgctatggaatgtatggttttatggatctagt
gtgcatagtactgtgagaaaacggaagccaatcatgcagcatttatgtggcgtgtgtgag
gtgcacaggcatcgcgatggtgaccagtcggcgaggggtagagcagtgtgggtggctgtg
gggagagccaagaccaccagaatccagtgtggtctgattcgggaccacttgcacagtgaa
gatactttctctacgggaagtggagaccacagctgccaaccaccaacagccccgtgcatc
tcagagctgtacaagcagagcagctgcacaccattcaaaagtgtcatcaattttcatcaa
aagactttcatcacaagacttttggagcccaaatccaaccatttgattaccactcaatca
ccgccaccattaccaagcctggaatctgagctcctggggtcactgaggatagccgagctt
tggaagttgacagagtttctggggaatccaagtggatgtggccagtgtgcacccagattt
aagggtctggaactcaggctagaggttggaactggagatttgtatctggtagttgaaacc
agtgtctgcagagaaatgctttggatattcattgatctctctaccaacttcagtggactt
tcagcctcctcaaagagaagagctcttcctcacttcacctcacctgagagaccttcccca
gggactactttttgtgagggatcacgaattcaaaagcctttggacaacacgctgaaatgt
aaatgtgtgaaatgcaggttgtatgtttttgagcacgtttctgaacatccccaaggcttg
gtttccttgtttgccaaacggggtctcattgttcatgaaggagctgcagtttacagagtg
tttaagcgctggcgagctgtgaatttgcactgggatgtgttaaattatgacaaagccaca
gacatcgaagaaagcagccggggagagtcttccacaagtaggactttgtggttgccattg
acagctctgcggaacagaaacttggtccacccaactcagttaacctcaccaaggtttcag
tgtggctatgtgttattgcacctgttcaatcggatgaggccccatgaagacttatcagaa
gataacagctcgggggaggttgtgatgagagtgacttcagtgtga

>gi568815593r:15967474_16279575|GENSCAN_predicted_peptide_5|195_aa
MFRQKFAAGVWPSWKTSARAVQKGNVGCEPPHGVPTGALSGGAVRREPISSRPQNGKSTD
SLHCVPEKAANTQHQPMTAVKSGAIPCKATGKEPTKAMGTHLLHQRDLDPHGTVSPLNLF
FVVNYPVSDCKTGHMSGSSSHQELESISPPLESRVGCETGFDQYNVAEVTCHVNKHEITS
WRMRGQCGPEISRPT

>gi568815593r:15967474_16279575|GENSCAN_predicted_CDS_5|588_bp
atgttcaggcagaaatttgctgcaggagtgtggccctcatggaaaacctctgctagggct
gtgcagaagggaaatgtggggtgtgagcccccacatggagtccccactggggcactgtct
ggtggagctgtgagaagagagccaatatcctccagaccccagaatggtaaatccactgac
agcttgcactgtgtacctgaaaaagccgcaaacactcaacaccagcccatgacagcagtc
aagagtggggctataccctgcaaagccacagggaaagagccgaccaaggccatgggaacc
cacctcttgcatcagcgtgacctggatccacatggaactgtgagtccattaaacctcttt
ttcgtcgtaaattacccagtctcagactgcaaaactggccacatgagcggcagctcctcc
catcaagagctggaatctatttccccaccccttgaatctagggttggctgtgagactggc
tttgaccagtataatgtggcagaggtcacctgccatgtcaacaagcatgaaataacttct
tggaggatgagaggccagtgtggaccagagataagccgccccacttga

>gi568815593r:15967474_16279575|GENSCAN_predicted_peptide_6|660_aa
MPCEAIETAPATEQELLQPRPRQGQMSTRAQLQIPLHFGEAKSKDTSQQVQLPDAEKFKG
CLTASLASTHLDVRRTVPLIVTTKNVSRHGEMSAGSDGVKGRQIQDGSRLSPLAPMPVAL
RISRAGVDPVHHLPHICQVSVSHQLALCVSKLPRGSLNGGGPHKAPLELLFTHISYVILL
KGFSATAQQLMVQAGATMILFWDVLKSGKRVGWEWCVRLVVCRKLGAASSSYLKEDSSKT
ESVTSVKIRIDTLPHINPVLYDLTLHGFGNYCMCTILSLVPCRKKTVSSALKMSPTEVLQ
GGVTEKLTSGQSPARQPGRQEGGGGTTMSFEGGHGGSRCRGAESGDAEPPPQPPPPPPPT
PPPGEPAPVPAAPRYLPPLPASPETPERAAGPSEPLGEVAPRCRGADELPPPPLPLQPAG
QEVAAAGDSGEGPRRLPEAAAAKGGPGESEAGAGGERERRGAGDQPETRSVCSSRSSSSG
GGDQRAGHQHQHHQPICKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCE
LCCYRYHVIAIKMKQPCQSQWVDGGQLRCLSLHATSPEAIIIQRLNQIGTSKKACSFDLV
LVLAVGWKLSWGCHLPRVTYHSYRGAIELELQITMYGLNTTLLSHNCQESEKYSCEETSD

>gi568815593r:15967474_16279575|GENSCAN_predicted_CDS_6|1983_bp
atgccctgtgaagccatagaaactgcccctgccacagagcaggagttgctacagcccagg
ccaagacaaggccagatgtctacaagagcccagcttcagatacctctacattttggggaa
gccaagagcaaagatacatctcagcaagtacagctaccagatgctgagaaattcaaagga
tgtttaacagcatccctggcctctacccatcttgatgtcagaagaaccgtcccactaatt
gtgacaaccaaaaatgtctccagacatggtgaaatgtccgctgggagtgatggggtaaaa
gggaggcagatacaagacggcagcaggctctcgcctctagcaccaatgcctgtggccctc
aggatttcccgggcaggagtagacccagttcaccatctacctcacatctgtcaagtgtca
gtcagtcaccagctagccctttgtgtgtccaaattgccaagaggctccctgaatggaggg
ggtccccacaaagctccactggaattactatttactcacatcagctatgtcattttgttg
aagggattttcagcgactgctcagcagctcatggtccaggctggagcaaccatgatcctt
ttctgggatgttttaaagtctggaaaaagggtgggttgggagtggtgtgtgaggctggtg
gtttgccgtaaacttggagctgcctcctcttcttatctgaaggaagattcttctaagact
gaaagcgtcacatcagtgaaaattcggatagacacactgccgcatataaatccggtgctt
tatgatctcacactgcacggatttggaaactactgcatgtgcacgattctcagcctagtt
ccctgcagaaagaaaactgttagctctgccctgaagatgagtcccacagaggttttgcag
ggtggagttaccgagaaattgacttcgggccagagcccggcccgccagccgggccggcag
gagggcggcggcggcacaaccatgagctttgagggcggccacggcggcagtcggtgtcgc
ggggcggagagcggggacgccgagcctcccccgcaacctcccccgccgccgccgccgacg
ccgccgccgggagagccggccccggtccccgcggccccgcgctacctgccgccgctgccc
gcgtcccccgagacccccgagcgcgccgcggggccaagcgagccgctaggggaggtggcc
ccgcggtgcaggggagcggacgagctgccgcctccgcccctgcccctgcagcccgccggc
caggaagtggcggcggccggcgactccggggaaggtccgaggcgcctcccggaggcggca
gcagcgaaaggcggccccggggagtctgaggccggcgcgggcggcgagcgcgagcggcgg
ggcgccggagaccagcccgagacgcgctcggtgtgcagcagccgcagcagcagcagtggc
ggcggcgaccagcgcgctgggcaccagcaccagcaccaccagcccatctgcaagatctgc
ttccagggcgcggagcagggtgagttgttgaacccctgccgatgtgatgggtcagttcgg
tatacacatcagctgtgcctgctaaaatggatcagtgagagaggttcctggacctgtgaa
ctttgctgttatagataccatgttatagccattaaaatgaaacaaccttgccagagtcaa
tgggttgatggaggtcagctgagatgtctttctctgcatgcaacatcacctgaagctatc
atcatccagaggcttaaccagattggaacatccaagaaggcttgctcatttgacctggtt
ttggtgctggctgttggctggaagctcagttggggctgccacctgcctagagtgacatat
cacagttatcggggggctattgagttggaattgcaaattacgatgtatggcttaaacacc
actttgctgtcacacaactgccaagagtctgaaaaatattcttgcgaagaaacctcagat
tga

>gi568815593r:15967474_16279575|GENSCAN_predicted_peptide_7|419_aa
MLDILRCAGQAQLNCQQKMLMRNSAVDQVVQKKQAAAARPSRSQVESLPPNCIGYKRFII
VLVTRDSQSWSTVTRKGIVIHLLMGDWQDTCKCGSDFGTENRQRLEQFGGLKRRQENVKS
LEHPIDLLNGFDQNADNDMDNEIQAKVVSDGDEELAGNWSKGDSCYVLAKRLAAFCPFHR
DLWNFELERDGLGYLAEEISKQQSIQEVTWVLLKAFHFIREAEHKNSQNLQPDNVIEKKI
QFSEEKFKLAAEICINNREPNVNPQDNGENVFRALWKGHVGLEPPHRVPTGAQPSEAVRR
WPPSSRPQNGRSTDILHHVPGKATDTQRQAMKAARRGTIPCKSTEVEPPKAMGSHLLHQR
NLDVRHGVKGDHFGALRFDCPAGFWTCMGPAAPLLWPISPIWNGCICPMPVSPLYLGSN

>gi568815593r:15967474_16279575|GENSCAN_predicted_CDS_7|1260_bp
atgctagacatcctacgatgtgcaggacaagcccagcttaactgccaacaaaaaatgtta
atgagaaactctgcggtagatcaagtggtccaaaagaaacaggcagcagctgcaaggcct
tctcgaagtcaagtggagtcacttccaccaaattgtattggttacaagagattcataatt
gtattggttacaagagattcacaaagctggtctacagtcaccaggaagggaattgtaatt
cacctcctgatgggtgactggcaagatacctgcaaatgtggaagtgactttggaactgag
aacaggcagaggttggagcagtttggagggctcaaaagaagacaggaaaatgtaaaaagt
ttggaacaccctatagacttgttgaatggctttgaccaaaatgctgataatgatatggac
aatgaaattcaggctaaggtggtctcagatggagatgaggaacttgctgggaactggagc
aaaggtgactcttgttatgttttagcaaagagactggctgcattttgccccttccataga
gacttgtggaactttgaacttgaaagagatggtttagggtatcttgcagaagaaatttct
aagcagcaaagcattcaagaagtgacttgggtgctgttaaaggcattccattttataaga
gaagcagagcataaaaattcacaaaatttgcagcctgacaatgtgatagaaaagaaaatc
caattttctgaagagaaattcaagctggctgcagaaatttgcataaataacagggagccg
aatgttaatccccaagacaatggggaaaacgtcttcagggcattgtggaagggacatgtg
gggctggagcccccacacagagtccctactggggcacagcctagtgaagctgtaagaaga
tggccaccgtcttccagaccccagaatggtagatccactgacatcttgcaccatgtgcct
ggaaaagccacagacactcaacgccaggccatgaaagcagccaggagggggactataccc
tgcaaatccacagaggtagagccacccaaggccatgggatcccacctcttgcatcagcgt
aacctggatgtgagacatggagtcaaaggagatcattttggagctttaagatttgactgc
cctgctggattttggacttgcatggggcctgcagcccctttgctttggccaatttctcca
atttggaatggctgtatttgcccaatgcctgtatccccgttgtatctaggaagtaactag

>gi568815593r:15967474_16279575|GENSCAN_predicted_peptide_8|299_aa
MMSLQGEEETPESSVSPAGTEKRPSHSFSPIVAFLQILKYNEPAPPVGLSNWTLVSGTQP
PCCEDVARPQRPGFRPKASVGIPANSHTRVPTLFNLGPVHINACSALDFMSLFVYLLSLP
DFKVQEGKDLLFFIFGTHYNYINLAHVLTLKKRKPHSHIGVTKLKSAVTILNLGALPAEL
PLCLGLSSPSPAPLPVAHSLSQQQQQVFLIFSEATLAQAPNAQRNITLMGICLPCLAGFE
AGSNFTGFLGLLQPHTEWLKTTEMHSYKYTATIRFLNLFPTFPTFLFHKAAIVILARSQ

>gi568815593r:15967474_16279575|GENSCAN_predicted_CDS_8|900_bp
atgatgtccttacaaggagaggaagagacaccagagagctctgtgtctcctgcaggcaca
gagaaaaggccatctcattctttttctcccatagtcgccttccttcagatcctcaaatat
aatgaacctgctcctcccgtagggctttcaaactggacactcgtttctggaacccagcca
ccatgctgtgaggatgtggcaagaccacagaggccaggtttccggcctaaagcttcagtt
ggaatcccagccaatagccatacaagagtaccaacattgtttaatcttggacctgttcat
attaacgcatgtagtgcattagattttatgtctttgtttgtgtaccttttatctctacca
gactttaaggtacaagagggtaaggaccttctcttttttatttttggaacccactacaac
tacatcaacctggcacatgttcttactttaaaaaaaagaaaaccccacagccatattggt
gtcaccaagctcaagtcagcagttaccattctcaatcttggtgcacttcccgctgagctt
cctctctgtctgggcctctcctcaccttcccctgcccctctacctgtagcacacagcctt
agccagcaacagcagcaggttttccttatcttcagcgaagccactcttgctcaagcccct
aatgctcagcgtaatattactctaatgggcatttgccttccttgtcttgctggatttgaa
gccggaagcaactttactggcttcctagggctgctgcaaccacacactgagtggcttaaa
accacagaaatgcactcttacaaatacacggcaaccatccgatttctcaatcttttcccc
acctttcccacctttctattccacaaagccgccattgtcatcctggcccgttctcaatga