GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:49:26

Sequence gi568815594f:151177173_151391450 : 214278 bp : 40.89% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12679  12889  211  0  1   68   57   170 0.564  10.90
 1.02 Intr +  13360  13562  203  2  2   38   23   149 0.033   1.48
 1.03 Intr +  13718  14006  289  1  1  -15   31   266 0.031   6.50
 1.04 Term +  25956  26128  173  1  2  107   38   162 0.953  10.11
 1.05 PlyA +  26235  26240    6                               1.05

 2.00 Prom +  30903  30942   40                              -7.45
 2.01 Sngl +  35354  35974  621  1  0   56   49   288 0.340  17.65
 2.02 PlyA +  36016  36021    6                               1.05

 3.00 Prom +  38076  38115   40                              -4.95
 3.01 Init +  44252  44424  173  1  2   61   50   147 0.624   7.16
 3.02 Term +  53009  53087   79  2  1   65   41    80 0.189  -2.74
 3.03 PlyA +  53969  53974    6                               1.05

 4.03 PlyA -  54338  54333    6                               1.05
 4.02 Term -  59229  58918  312  0  0   38   42   263 0.915  10.72
 4.01 Init -  60060  60040   21  0  0   60  101    28 0.210  -0.11
 4.00 Prom -  69060  69021   40                              -3.75

 5.00 Prom +  69945  69984   40                              -4.65
 5.01 Init +  77345  77465  121  1  1   68   74    77 0.879   4.70
 5.02 Intr +  82344  82464  121  1  1   61   86    96 0.546   5.33
 5.03 Intr +  84187  84371  185  1  2   56   54   107 0.966   2.61
 5.04 Term +  85145  85401  257  0  2   90   46   147 0.478   5.46
 5.05 PlyA +  85981  85986    6                               1.05

 6.00 Prom +  96116  96155   40                              -6.55
 6.01 Init + 100001 100052   52  1  1   86   99   103 0.914  10.72
 6.02 Intr + 102624 102786  163  1  1   95   84    37 0.804   2.11
 6.03 Intr + 103809 104114  306  0  0   18   61   187 0.599   3.64
 6.04 Intr + 104976 105241  266  0  2  119   94   110 0.989  10.93
 6.05 Intr + 105945 106114  170  1  2  141   77   167 0.936  19.64
 6.06 Intr + 113946 114005   60  2  0  124   60    53 0.497   4.11
 6.07 Intr + 116540 116571   32  1  2   92   61    25 0.076  -3.79
 6.08 Intr + 120599 120750  152  2  2   79   74    50 0.204   1.59
 6.09 Intr + 130176 130368  193  1  1   97   89    78 0.325   6.43
 6.10 Term + 139572 139740  169  0  1   34   47   101 0.046  -3.03
 6.11 PlyA + 140499 140504    6                               1.05

 7.04 PlyA - 141888 141883    6                               1.05
 7.03 Term - 146419 146394   26  2  2   83   48    62 0.484  -0.89
 7.02 Intr - 147853 147686  168  2  0   21   71   171 0.734   7.70
 7.01 Init - 148180 148069  112  1  1   67   94    33 0.227   2.23
 7.00 Prom - 153360 153321   40                              -1.25

 8.00 Prom + 157236 157275   40                              -3.15
 8.01 Init + 161304 161542  239  2  2   51   67   148 0.248   6.53
 8.02 Intr + 163956 164085  130  0  1   92   69    12 0.103  -0.52
 8.03 Intr + 175634 175823  190  1  1   71  115    75 0.962   6.74
 8.04 Intr + 175935 176060  126  1  0   56   73   129 0.948   7.93
 8.05 Intr + 184883 184990  108  0  0   33  105   107 0.086   6.24
 8.06 Term + 198359 198468  110  0  2  108   48    30 0.195  -1.31
 8.07 PlyA + 199981 199986    6                               1.05

 9.02 PlyA - 204963 204958    6                               1.05
 9.01 Sngl - 209807 209547  261  2  0   85   42   210 0.501  11.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  13360  13766  407  2  2   38   48   267 0.909  12.06
S.002 Term + 176141 176256  116  0  2   45   48   124 0.850   1.85


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:151177173_151391450|GENSCAN_predicted_peptide_1|291_aa
MWKRLWNWVTGRGWNSLEGSEEDRKMWDSLELPRDLLNGFAQNADNDMDNENQAEVFSDG
DEELVGNLSKATPAVAERGQRRAWAVASEGASPKTWQLPCGVERASAQKSRIEVWEPPPR
FQGIYGNTWMSRQKFAAGLALCSWKSRRHSTPAVKAAGGEAIPCKTTGVELPKTMGTHLL
HQHDLDRFGPGVKVDRFGALRFDLPCWISDLHGDCSPFVLANFSHLEWLYLPNACHSPNT
KGLKKTGGIPMTGPPAIAASVPLTPSSPPALSQEESADTEQSLAVGIGATG

>gi568815594f:151177173_151391450|GENSCAN_predicted_CDS_1|876_bp
atgtggaagcgactttggaactgggtaacaggcaggggttggaatagtttggagggttca
gaagaagacaggaaaatgtgggacagtttggaacttcctagagacttgctgaatggcttt
gcccaaaatgctgataatgatatggataatgaaaaccaggctgaggtgttctcagatgga
gatgaggaacttgttgggaacttgagcaaagccactccagctgtggctgaaaggggacaa
cgtagagcttgggccgtggcttcagagggtgcaagccccaagacttggcagcttccatgt
ggtgttgagcgtgcaagtgcacagaagtcaagaattgaggtttgggaacctccacctaga
tttcaggggatttatggaaacacctggatgtccaggcagaagtttgctgcagggcttgca
ctgtgctcctggaaaagccgcagacactcaacgccagccgtgaaagcagctggtggggag
gctataccctgcaaaaccacaggggtggagctgcccaagaccatgggaacccacctcttg
catcagcatgacctggatcgttttggacctggcgtcaaagtagatcgttttggagcttta
agatttgacctgccctgctggatttcagacttgcatggggactgtagcccctttgttttg
gccaatttctcccatttggaatggctgtatttacccaatgcctgccacagtcctaacacc
aaaggtctgaaaaagacaggtggaattcccatgacaggacccccagcaatcgcagcatcg
gtgccactgaccccatcatcgccaccagccctttcccaggaagagtcagctgacacggaa
caatccttggcagtggggattggggctactggatga

>gi568815594f:151177173_151391450|GENSCAN_predicted_peptide_2|206_aa
MTAYLFTAWFTKYFKPTLETYCSGKKIPFKILLLIDNAPGHPRALMQMYREIHIVFMSAD
TTSNLQPMDQGVILTLKSYYLRNTFCKAIVAIDSNSSDELGQSKWKTWKGFTIVDAIKNI
CDSWEEGNVTTLTGVWKKSIPTPMDDFEGFKTPVEEVTADIVETARELELEVDPKDVTTL
MYLMIKLQWMRSSFFWMSKESRIYSW

>gi568815594f:151177173_151391450|GENSCAN_predicted_CDS_2|621_bp
atgacagcatatctgtttacagcatggtttactaaatattttaagcccactcttgagacc
tattgctcaggaaaaaagattcctttcaaaatattactgctcattgacaatgcacctggt
cacccaagagctctgatgcagatgtacagggagattcatattgttttcatgtctgctgac
acaacatccaatctgcaacccatggatcaaggagttattttgactttgaagtcttattat
ttaagaaatacattttgtaaggccatagttgccatagatagtaattcctctgatgaactg
gggcaaagtaaatggaaaacctggaaaggattcaccattgtagatgccattaagaatatc
tgtgattcatgggaggagggcaacgtaacaacattaacaggagtttggaagaagtcgatt
ccaacccccatggatgactttgaggggttcaagactcccgtggaggaagtaactgcagat
atagtggaaacagcaagagaactagaattagaagtggaccctaaagatgtgaccacattg
atgtatctgatgataaagcttcagtggatgaggagttccttcttctggatgagcaaagaa
agtagaatttactcctggtga

>gi568815594f:151177173_151391450|GENSCAN_predicted_peptide_3|83_aa
MAGEQVTANVSRYPGQKTMSFPEKTFLLSYRASLLAVVTHRSNNSRGRAFESQVLPDLCY
ATYVEMGPCSGTDSFWVRLRRSY

>gi568815594f:151177173_151391450|GENSCAN_predicted_CDS_3|252_bp
atggcaggagaacaggtcaccgccaatgtcagcagataccctggacagaaaacgatgtcc
tttcctgaaaaaacatttctcctttcttatagggcatcactccttgctgttgtaacacac
agatccaataatagtcgtgggcgagcttttgagagtcaggttcttcccgatttgtgttac
gccacttacgtagaaatgggcccctgttctggcacagacagtttttgggtacggctacgc
agatcctactga

>gi568815594f:151177173_151391450|GENSCAN_predicted_peptide_4|110_aa
MKPQTLAHLARALRQPRGSSSPNQAQQVPASCAKCGARGTHAHLEPPPARKPRAQPRLPL
APLHELREPALASASPREGPPQRSGRLKGSSSAARADAEAEEAPRVNEGC

>gi568815594f:151177173_151391450|GENSCAN_predicted_CDS_4|333_bp
atgaagccacagaccctcgcgcacctagcccgggcactccggcagcccagagggagctca
tcccccaatcaagcccagcaggtgccagccagctgtgccaagtgcggggcccgcggaacc
cacgcacacctggaacccccgccagcccgcaagccccgggcgcagccccggctcccgctt
gcacctctccacgagctgagggagccggctctggcctcggccagccccagagaggggccc
ccacagcgcagcggcaggctgaagggctcctccagcgcggccagagcggacgccgaggcc
gaggaggcaccaagagtgaacgagggctgctag

>gi568815594f:151177173_151391450|GENSCAN_predicted_peptide_5|227_aa
MTLKEHAAFKHLFNKAHLAPPLIHLTLSGHSTCFREHRVGGWGASVGQWPWQVSIRQGLI
HVCSDTLISEEWVLTVAICFPLSPHPDFQANTSSAIAVVELPSPVSVSPVVLLICLPSSE
VYLKKNTTSCWVTGWGYTGIFQYIKRSYTLKELKVPLIDLQTCGDHYQNEILLHGVELII
SEAMICSKLPVGQMDQCTVRIHPSGTFHRPCLPQCASSTSHIFRDPG

>gi568815594f:151177173_151391450|GENSCAN_predicted_CDS_5|684_bp
atgactcttaaggagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttggg
ggctggggggctagtgtggggcagtggccctggcaggtcagcatccgccagggcttgatt
cacgtctgctcagataccctcatctcagaggagtgggtgctgacagtggcgatctgcttc
ccattatccccccaccctgatttccaagcaaacacatctagtgccatcgctgtggtagaa
ctgccctccccagtttctgttagccctgttgtcctgctcatctgccttccctcatctgaa
gtctacctgaagaagaatacaacctcctgctgggtgactggatggggctatactggaata
ttccaatatatcaagcgttcttatacactgaaggagctgaaagtgcccctcattgatctc
cagacatgcggtgaccactatcaaaatgaaatcttgctgcacggagttgagctcatcatc
agtgaagctatgatctgctccaagctcccagtggggcagatggatcagtgtactgtaaga
atccacccctcaggcacctttcacaggccttgccttccccagtgtgcttcctccacttct
catatcttcagagaccctgggtga

>gi568815594f:151177173_151391450|GENSCAN_predicted_peptide_6|520_aa
MGPAGCAFTLLLLLGISVCGQPVYSSRVVGGQDAAAGRWPWQVSLHFDHNFICGGSLVSE
RLILTAAHCIQPSHRRICSTKIKGEKQENTGSRQKGNKTQKRIPKKVIKDKESAKMMAVQ
QPRLEQESRGLQKKDSIDRMPDKFEQNERRFTLLVESLGNETGDGYKDKNKKPKTWTTFS
YTVWLGSITVGDSRKRVKYYVSKIVIHPKYQDTTADVALLKLSSQVTFTSAILPICLPSV
TKQLAIPPFCWVTGWGKVKESSDRDYHSALQEAEVPIIDRQACEQLYNPIGIFLPALEPV
IKEDKICAGDTQNMKDSCKGDSGGPLSCHIDGVWIQTGVHFKGILLLLTEICEYVTTRSK
GDFAHMIKYPEMGTSSVLSGGTNVINHMASYKSKIGGSGPVSPFLPEQHEPSLAKYPNLH
LSFKSQINQDPRWRSPREPKKPLASGRQPLGSAFPEFLVLDPSGRTSLQFLKVRPTAAEE
QGLVPAASKQGGQASARAFSFLPCVKLSKLPPQPLPCPMP

>gi568815594f:151177173_151391450|GENSCAN_predicted_CDS_6|1563_bp
atgggccctgctggctgtgccttcacgctgctccttctgctggggatctcagtgtgtggg
caacctgtatactccagccgcgttgtaggtggccaggatgctgctgcagggcgctggcct
tggcaggtcagcctacactttgaccacaactttatctgtggaggttccctcgtcagtgag
aggttgatactgacagcagcacactgcatacaaccaagccataggagaatctgctccacc
aaaataaagggggaaaaacaggaaaacacaggatccagacaaaaggggaataaaacacag
aagagaatccctaagaaagtcataaaggataaagaaagtgccaagatgatggctgtgcag
cagcccagattagaacaagagagcagagggctccaaaaaaaagatagtattgatagaatg
cctgacaagtttgaacaaaatgagaggagatttacacttctggtggagagcctggggaat
gagactggtgatgggtataaagataaaaacaaaaaaccaaagacctggactactttttca
tatactgtgtggctaggatcgattacagtaggtgactcaaggaaacgtgtgaagtactac
gtgtccaaaatcgtcatccatcccaagtaccaagatacaacggcagacgtcgccttgttg
aaactgtcctctcaagtcaccttcacttctgccatcctgcctatttgcttgcccagtgtc
acaaagcagttggcaattccacccttttgttgggtgaccggatggggaaaagttaaggaa
agttcagatagagattaccattctgcccttcaggaagcagaagtacccattattgaccgc
caggcttgtgaacagctctacaatcccatcggtatcttcttgccagcactggagccagtc
atcaaggaagacaagatttgtgctggtgatactcaaaacatgaaggatagttgcaagggt
gattctggagggcctctgtcgtgtcacattgatggtgtatggatccagacaggagtacac
ttcaaaggcatcctcctgctgctcacagaaatctgtgaatatgttactacacgtagtaaa
ggggattttgcacatatgattaagtatcctgagatggggacatcatctgtattatctggt
gggaccaatgtaatcaatcacatggcttcttataagagtaagataggaggatcagggcca
gtgtctcccttcttacctgaacaacatgagccttctttggccaaatatccaaatctacat
ttaagcttcaaaagccaaattaatcaggacccaaggtggcgcagccctcgtgagcccaaa
aagccactcgcgtctgggcgccaacccttaggctctgccttcccagagttcctggtgcta
gacccgtcaggcaggacaagcttacagttcctgaaggtgaggccaacagctgctgaggag
caaggactcgttccagctgcttctaaacaagggggccaggcctctgccagagccttctcc
ttcctgccctgtgtcaagctatccaagcttcctcctcaacctttaccctgccctatgccc
tga

>gi568815594f:151177173_151391450|GENSCAN_predicted_peptide_7|101_aa
MAEGRRREDEEEELRERRELGGQRRARGRALSGHSAAVVVQLKLKFSVHTKSRSCWLGTC
GLVDDLSLDESEVNGRLGGQRHLPRGLPAPPQPGCEDDVME

>gi568815594f:151177173_151391450|GENSCAN_predicted_CDS_7|306_bp
atggctgagggccggcggcgggaggacgaggaggaagagctacgcgagcgccgcgaactt
ggtggccagcgccgcgcccggggccgtgcgctctcgggccactcggccgcagtggtcgta
cagctgaaactcaaattttccgtgcacactaaatccaggagctgctggcttgggacttgt
ggcctggttgatgacttatctctggatgagtcagaggtcaatggccgtctcggtggacaa
cgacaccttccgaggggtttgcctgcgccgccgcagccagggtgtgaggacgatgtaatg
gaatga

>gi568815594f:151177173_151391450|GENSCAN_predicted_peptide_8|300_aa
MTAELNRVPKATGHKKVLGANANKSISRYPAPKSAMIEKRRKALYWEIIGVRRYQTVARG
AETQRCLNWTPHRALSNKASLLFNVSTWAKIAGMKRKDGLWTNSGSLPHPVILTALNCLL
ISKVHLREVFLGSISTSWLALTTPFSVSTFIVYIPLLWTNHTVSGIGSSRWVLGLADFKN
EAADPRGVKPQTFAVSVTALKGGASRVVCSSRWVRGLSDFRSEAADLCNSYFRFGTYCRQ
DKKSDGQSEEESCAQGPSNPAGERVSCVHADVPLNSYFLTFLLLSALTFLNVTRNKGTIS

>gi568815594f:151177173_151391450|GENSCAN_predicted_CDS_8|903_bp
atgacagcagaactcaacagagtacccaaagcaacaggtcacaaaaaggttcttggggcc
aatgcaaataagtctattagcagatatcctgccccaaaaagtgccatgatagaaaaaagg
agaaaagcgctgtactgggaaataataggggtacgcaggtatcagacagtagccagagga
gctgaaacacagagatgcctgaactggacaccacacagagcactgagcaataaagcaagc
cttctctttaatgtctccacctgggctaagatagcaggaatgaagagaaaagatggactt
tggacaaactcaggttcacttcctcatcctgtgattttaactgctctgaactgtttattg
atcagtaaagtacatctccgtgaagttttcctgggtagtatttccacctcctggttagca
ttaaccactcccttctctgtctccacatttattgtgtacatacctctcttgtggaccaac
catactgtgtccggaattggttcctcccggtgggttcttggtctggctgacttcaagaat
gaagccgcggaccctcgcggagtgaagccgcagaccttcgcagtgagtgttacagctctt
aaaggtggtgcgtccagagttgtttgttcctcccggtgggttcgtggtctttctgacttc
aggagcgaagctgcagacctttgcaattcctacttccggtttgggacttactgtcgacaa
gataagaaaagtgatggacaaagtgaggaggagtcatgtgctcaaggaccctccaatcca
gcaggggaaagagtctcttgtgttcatgctgatgtgcctctgaatagctacttccttact
tttttacttctcagtgccctcacattcttgaatgtcactaggaataagggcactatttct
taa

>gi568815594f:151177173_151391450|GENSCAN_predicted_peptide_9|86_aa
MHSALKDKPLEFFKRKKCEHKELEQLLKATPSSNVSALKASFFVANYVAKAKNPFTIGEE
LILSAAKNICHELLGEASVQMCSSFG

>gi568815594f:151177173_151391450|GENSCAN_predicted_CDS_9|261_bp
atgcactctgcattaaaagacaagcctttggagtttttcaaaagaaaaaaatgtgaacac
aaagaactggagcaattattgaaggccaccccttcatcaaatgtgtctgcactgaaagca
tcattctttgtggctaactacgttgctaaagctaagaacccctttactattggtgaagag
ttgatcctgtctgctgctaagaatatttgtcatgaacttctaggagaggcttcagttcaa
atgtgttcctcttttggctag