GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:32:59

Sequence gi568815594r:67372608_67644196 : 271589 bp : 37.33% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4863   4932   70  2  1   27  100    96 0.854   5.96
 1.02 Term +   9255   9373  119  1  2   30   43   139 0.675   1.32
 1.03 PlyA +   9753   9758    6                               1.05

 2.02 PlyA -  11449  11444    6                               1.05
 2.01 Sngl -  37362  37105  258  0  0   73   36   168 0.632   4.98
 2.00 Prom -  38125  38086   40                              -4.75

 3.03 PlyA -  38364  38359    6                               1.05
 3.02 Term -  39336  38900  437  1  2  -30   41   365 0.775  14.46
 3.01 Init -  40071  39969  103  0  1   83   65    84 0.636   6.05
 3.00 Prom -  58331  58292   40                              -4.95

 4.00 Prom +  61126  61165   40                              -7.45
 4.01 Sngl +  67605  68123  519  2  0   10   41   243 0.592   7.59
 4.02 PlyA +  68197  68202    6                               1.05

 5.00 Prom +  68960  68999   40                              -3.65
 5.01 Init +  73332  73564  233  2  2   75   27   268 0.731  17.18
 5.02 Intr +  77136  77267  132  0  0   26  109    63 0.017   1.04
 5.03 Intr +  93113  93374  262  2  1   92   80    91 0.461   5.27
 5.04 Term +  93768  93959  192  2  0   70   39   110 0.407   0.74
 5.05 PlyA +  94216  94221    6                               1.05

 6.16 PlyA -  96182  96177    6                               1.05
 6.15 Term - 100068  99998   71  1  2   96   48    39 0.047  -2.18
 6.14 Intr - 102371 102281   91  2  1   94  110    -7 0.059   0.75
 6.13 Intr - 104617 104543   75  1  0   55  106    34 0.056   0.69
 6.12 Intr - 117514 117360  155  2  2   75   97    22 0.189   0.67
 6.11 Intr - 120390 120262  129  1  0   85   10   105 0.411   2.15
 6.10 Intr - 121381 121277  105  2  0   33   98   122 0.911   6.97
 6.09 Intr - 132677 132598   80  1  2   64   97    63 0.821   3.08
 6.08 Intr - 134327 134181  147  1  0   64   91    93 0.965   5.63
 6.07 Intr - 136498 136207  292  2  1   68   63   120 0.896   2.77
 6.06 Intr - 139962 139795  168  1  0   62   89   148 0.907  11.30
 6.05 Intr - 142080 141467  614  2  2   39  106   387 0.560  26.70
 6.04 Intr - 145761 145549  213  2  0   96  109   241 0.999  23.91
 6.03 Intr - 146895 146610  286  1  1   65   87   220 0.506  15.08
 6.02 Intr - 158307 158208  100  0  1   83   77    64 0.008   3.56
 6.01 Init - 172748 172731   18  2  0   93  119    11 0.005   4.35
 6.00 Prom - 173314 173275   40                              -5.45

 7.03 PlyA - 173700 173695    6                               1.05
 7.02 Term - 179772 179610  163  2  1  115   42   127 0.863   7.23
 7.01 Init - 184228 184212   17  1  2   76   78     3 0.414  -2.02
 7.00 Prom - 185057 185018   40                              -5.45

 8.00 Prom + 186914 186953   40                              -6.95
 8.01 Init + 188568 188678  111  2  0   84  105    40 0.847   5.56
 8.02 Intr + 198477 198548   72  2  0  109   92    24 0.870   3.58
 8.03 Intr + 202778 202891  114  1  0  106  105   129 0.906  16.12
 8.04 Intr + 204596 204652   57  1  0   85   75    37 0.479   0.26
 8.05 Term + 208698 208868  171  2  0   81   42   136 0.648   5.14
 8.06 PlyA + 209133 209138    6                               1.05

 9.04 PlyA - 209380 209375    6                               1.05
 9.03 Term - 209533 209388  146  2  2   73   34   121 0.069   2.29
 9.02 Intr - 211046 210959   88  2  1   33   78    35 0.047  -4.38
 9.01 Init - 215884 215693  192  1  0   88   65   196 0.394  14.32
 9.00 Prom - 220656 220617   40                              -5.35

10.11 PlyA - 222276 222271    6                               1.05
10.10 Term - 224660 224577   84  2  0   88   42    84 0.447   0.47
10.09 Intr - 246525 246423  103  2  1   53   63   144 0.279   7.66
10.08 Intr - 250318 250224   95  1  2   60  111    23 0.725  -0.36
10.07 Intr - 252580 252387  194  2  2   34  111   220 0.933  17.19
10.06 Intr - 253870 253753  118  1  1   37   78   100 0.698   3.02
10.05 Intr - 256535 256464   72  2  0   52   95    57 0.673   1.48
10.04 Intr - 260866 260738  129  1  0   89  115    -6 0.808   2.17
10.03 Intr - 261715 261635   81  1  0  106   98     2 0.784   1.92
10.02 Intr - 262951 262846  106  0  1   62  103    31 0.119   1.30
10.01 Intr - 266517 266336  182  0  2   54   91    83 0.086   2.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  34830  34501  330  0  0   81   44   120 0.831   2.67


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:67372608_67644196|GENSCAN_predicted_peptide_1|62_aa
MKAVFDEVTSRLNTAKERFNELEAPKRKRPSRMGHDDNGGFVEKKRGNVGKRQRDQIVTV
SG

>gi568815594r:67372608_67644196|GENSCAN_predicted_CDS_1|189_bp
atgaaggctgtctttgatgaggtcaccagcagactgaacacagccaaagaaagattcaat
gagcttgaagctccgaagagaaagcgaccatcgagaatgggccatgatgacaatggcggt
tttgtcgaaaagaaaagggggaatgtggggaaaagacagagagatcagattgttactgtg
tctgggtag

>gi568815594r:67372608_67644196|GENSCAN_predicted_peptide_2|85_aa
MLLNDYWVNNNIKGEINKFLETNEIKDTTYQSLWDTAKATFRAVFIALNAHKRKRERSKI
DTLTSQLKELEKQEQTNSKLAEENK

>gi568815594r:67372608_67644196|GENSCAN_predicted_CDS_2|258_bp
atgctcctgaatgactactgggtaaataacaacattaagggagaaataaataagttcttg
gaaaccaatgagatcaaagacacaacgtaccagagtctctgggacacagctaaagcaacg
tttagagctgtgtttatagcactaaatgcccacaagagaaagcgggaaagatctaaaata
gataccctaacttcacaattaaaagaactagagaagcaagaacaaacaaattcaaaacta
gcagaagaaaataaataa

>gi568815594r:67372608_67644196|GENSCAN_predicted_peptide_3|179_aa
MEPNKLRSTGLKFSLPAQQSEVNLGHSSLLWMWAERNSIKINKKDDHVTTPFEGHQHQRP
KADKSMKMRKNQCKKAENSKTQNASSPPKAGNSSPAREHNWMENKFDELTEVGMRRWVIT
NSSELKEHVLTRCKEAKNLDKRLQELLTRIISLEKSINDLMELKNTAREFHEAHTSINS

>gi568815594r:67372608_67644196|GENSCAN_predicted_CDS_3|540_bp
atggagcccaacaagctaagatccactggcttgaaattctcgctgccagcacagcagtct
gaagtcaacctgggacactcgagcttgttgtggatgtgggcggaaaggaatagcatcaag
atcaacaaaaaggatgaccacgtgacaaccccattcgaaggccaccaacatcaaagacca
aaggcagacaaatccatgaagatgaggaaaaaccagtgcaaaaaggctgaaaattccaaa
acccagaatgcctcttctcctccaaaagctggcaactcctcaccagcaagggaacacaac
tggatggagaataagtttgatgaattgacagaagttggtatgagaaggtgggtaataaca
aactcctctgagctaaaggagcatgttctaacccgatgcaaggaagctaagaaccttgat
aaaaggttacaggaactgctaactagaataatcagtttagagaaaagcataaatgacctg
atggagctgaaaaacacagcacgagaatttcatgaagcacacacaagtatcaatagctga

>gi568815594r:67372608_67644196|GENSCAN_predicted_peptide_4|172_aa
MCKNNKHSYAPKTDKQQIMSKLPFTIASKRIKYLGIQFTRDVKDLLKENYKPLLNEIKED
TNKWKNIPCSWIGRTSIVNMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAR
IAKTILSKKIKAGGIMLPDFKLYYKATANKTAWYWYQNRDIDQWNTEQRPQK

>gi568815594r:67372608_67644196|GENSCAN_predicted_CDS_4|519_bp
atgtgcaaaaataacaagcattcttatgcaccaaaaaccgacaaacagcaaatcatgagt
aaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaatttacaagg
gatgtgaaggacctcctcaaggagaactacaaaccactgctcaatgaaataaaagaggac
acaaacaaatggaagaacattccatgctcatggataggaagaaccagtattgtgaacatg
gccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgc
attgccaagacaatcctaagcaaaaagattaaagctggaggcatcatgctacctgacttc
aaactatactacaaggctacagcaaacaaaacagcttggtactggtaccaaaacagagat
atagaccaatggaacacagaacagaggcctcagaaataa

>gi568815594r:67372608_67644196|GENSCAN_predicted_peptide_5|272_aa
MDERFKCKTSNYKNPRRGEKRRRSTVQRSSCSPFPSLGERCLRSTRCRRRYRYRHRHRRR
LLSLWRGGGGGARAQRHNNHTPLYLSKELKTYVLWKILHMDVYVSFIHNCQNLEATKVSF
SSWPWEPLLENLRTAHITGFLADIPLHQPGVWQPHWVASPSRAFTVVWLSGTPTTEGKGS
IPYQGSIPYDKRIQMAGLEFQNLHLWEAQTELGLLPWELHVGAPLDSLSGTRQGDCIPTG
RVPSRFRLACGVESHSLSTWNTNVPADEEVPV

>gi568815594r:67372608_67644196|GENSCAN_predicted_CDS_5|819_bp
atggatgaaagatttaaatgtaagacctcaaactataagaatcctagaagaggtgaaaag
cgacggcgcagcacggtgcagcgcagctcctgctcgcctttcccctcgctgggcgagagg
tgtctacggagcacccgctgccgccgccgctaccgctaccgccaccgccaccgccgccgg
ctgctgtctctatggcgaggaggaggaggaggagcgcgagctcagcgacacaacaatcat
actcctttgtatttatcaaaggaattgaaaacttatgttctatggaaaatccttcatatg
gatgtttatgtcagctttattcataattgccaaaacttggaagcaaccaaggtgtccttc
agcagctggccctgggagccactgctggaaaatttgaggacagctcatatcactggattc
cttgcagacattcccctgcaccagcctggagtgtggcagccccactgggtggctagcccc
agcagagcattcacagtagtctggctctcagggactcccactactgaaggaaaggggagt
ataccgtatcaagggagcatcccgtatgacaaaagaatccagatggcaggccttgagttc
cagaaccttcatttgtgggaagcacagacagagctggggcttctcccatgggagcttcat
gtgggtgcacctttagacagcctttctggaacacgtcagggtgactgcatccccacagga
agagtgccctccaggttcaggcttgcatgtggggtagagtcacactctctctctacttgg
aacaccaacgttcctgcagatgaagaggtacctgtctga

>gi568815594r:67372608_67644196|GENSCAN_predicted_peptide_6|847_aa
MAASGLCQKSHPKSVPVSSKKKEASLQFVVEPSEATNRSVQAHEVHQKILATDVSSKNTP
DSKKISSRNINDHHSEADEEFYLSVGSPSVLLDAKTSVSQNVIPSSAQKRETYTFENSVN
MLPSSTEVSVKTKKRLNFDDKVMLKKIEIDNKVSDEEDKTSEGQERKPSGSSQNRIRDSE
YEIQRQAKKSFSTLFLETVKRKSESSPIVRHAATAPPHSCPPDDTKLIEDEFIIDESDQS
FASRSWITIPRKAGSLKQRTISPAESTALLQGRKSREKHHNILPKTLANDKHSHKPHPVE
TSQPSDKTVLDTSYALIGETVNNYRSTKYEMYSKNAEKPSRSKRTIKQKQRRKFMAKPAE
EQLDVGQSKDENIHTSHITQDEFQRNSDRNMEEHEEMGNDCVSKKQMPPVGSKKSSTRKD
KEESKKKRFSSESKNKLVPEEVTSTVTKSRRISRRPSDWWVVKSEESPVYSNSSVRNELP
MHHNSSRKSTKKTNQSSKNIRKKTIPLKRQKTATKGNQRVQKFLNAEGSGGIVGHDEISR
CSLSEPLESDEADLAKKKNLDCSRSTRSSKNEDNIMTAQNVPLKPQTSGYTCNIPTESNL
DSGEHKTSVLEESGPSRLNNNYLMSGKNDVDDEEVHGSSVLPSNTPNVRRTKRTRLKPLE
YWRGERIDYQGRPSGGFVISGVLSPDTISSKRKAKENIGKVNKKSNKKRICLDNDERNLV
RPQDTYQFFVKHGELKVYKTLDTPFFSTGKLILGPQEEKGKQHVGQDILVAGHQPGDGTF
KRASADTRLPQVAWVFYVNFGDLLCTLHETPYILSTGDSFYVPSGNYYNIKNLRNEESVL
LFTQIKR

>gi568815594r:67372608_67644196|GENSCAN_predicted_CDS_6|2544_bp
atggctgcgtccggtctgtgccagaaatcacatccaaagtcagttccagtttcttcaaag
aagaaagaagcctctctacagtttgttgtagaaccaagtgaagccacaaacagatcagtt
caggcccatgaagttcatcagaaaattctggcaactgatgttagttccaaaaatacacct
gactcgaaaaaaatatcaagtagaaacataaatgatcatcacagtgaagctgatgaagaa
ttttacttatccgttggctcaccttctgttcttttggatgcaaaaacatctgtatcacaa
aatgttattccatctagtgcccaaaagagagagacttacacttttgaaaattcagtaaat
atgctgccttcaagtacagaggtttcagttaaaaccaaaaaaaggttaaactttgatgat
aaagttatgttaaagaaaatagaaatagataataaagtatcagatgaagaggataaaaca
tcggaaggacaagaaagaaaaccatcaggatcatctcagaatagaatacgagattcagaa
tatgaaattcaacgacaagctaaaaaaagtttttcaacattgtttttagaaacagtaaaa
cgaaaaagtgaatccagtcccattgttaggcatgcggcaactgctccacctcattcgtgt
cctcccgatgatacgaagttgatagaggatgaatttataattgatgagtcggatcaaagt
tttgccagtagatcttggattacaataccaagaaaggcagggtctctgaaacaacgcaca
atatccccggctgagagcactgcactccttcaaggtagaaagtcaagagaaaagcatcat
aatatattacctaagactttggcaaatgacaaacattcccataaacctcacccagtagag
acatctcagccctctgataaaacagtactggatacaagttatgctttgataggtgaaaca
gtaaataattatagatctacaaaatatgaaatgtattccaagaatgcagaaaaaccatct
agaagcaaaaggactataaaacaaaaacagagaagaaaattcatggctaaaccagctgaa
gaacagcttgatgtgggacagtctaaagatgaaaacatacatacatcacatattacccaa
gacgaatttcaaagaaattcagacagaaatatggaagagcatgaagagatgggaaatgat
tgtgtttccaaaaaacagatgccacctgtgggaagcaagaaaagtagcactagaaaagat
aaggaagaatctaaaaagaagcgcttttccagtgagtccaagaacaaacttgtacctgaa
gaagtgacttcaactgtcacgaaaagtcgaagaatttccaggcgtccatctgattggtgg
gtggtaaaatcagaggagagtcctgtttatagcaattcttcagtaagaaatgaattacca
atgcatcacaatagtagccgaaaatctactaagaaaacaaatcagtcatctaagaatatt
aggaaaaaaactattccacttaaaaggcagaagacagcaactaaaggcaaccaaagagta
cagaagtttttaaatgctgaaggttctggaggtatcgttggtcatgatgaaatttccaga
tgttcgctgagtgagccattggaaagtgatgaggcagacttggctaagaagaaaaatctt
gattgttctagatctacaagaagctcaaagaatgaagataacattatgactgcacagaat
gttcccctaaagcctcagaccagtggatatacatgtaatataccaacagagtcaaacttg
gattctggagagcataagacttcagttttagaggaaagtggaccttccaggctcaataat
aattatttaatgtctggaaagaatgatgtggatgatgaggaagttcatggaagttcagta
ttgccctccaacacaccaaatgttcgcaggaccaagagaacacgtttgaaacctttggag
tactggcgaggagagcgaatagattatcaaggaaggccatcaggaggattcgtgattagt
ggagtactatctccagacacaatatcgtctaaaaggaaggcaaaagaaaatattggaaaa
gtcaacaaaaaatctaataagaaaaggatctgtcttgataacgatgaaagaaatcttgta
aggccacaagatacatatcaattttttgttaagcatggtgagttgaaggtatacaagaca
ttggatacaccctttttttctactgggaaattgatattaggaccacaagaagaaaaggga
aagcagcatgttggccaggatatattggtggctggccaccagccaggagatggtactttc
aagagagcatctgctgatacaaggttgccacaggttgcctgggttttttatgttaacttt
ggtgaccttttgtgtactttacatgaaacaccttatatattaagtactggggattcgttc
tatgttccttcaggtaactattataacatcaaaaatctccggaatgaggaaagtgttctt
ctttttactcagataaaaagatga

>gi568815594r:67372608_67644196|GENSCAN_predicted_peptide_7|59_aa
MTALLLCTKIGKLKADSGEYACSAERCMGTDTQVFLPDKHSKETQKQYKPLINSPTLNP

>gi568815594r:67372608_67644196|GENSCAN_predicted_CDS_7|180_bp
atgactgctttgcttttgtgcactaagatagggaagctaaaagcagactcgggggagtat
gcctgcagcgcagaaagatgtatgggaacagacacacaagtcttcctcccagataagcac
agcaaagagacacagaagcagtacaagcctctgataaactctcccaccctgaatccttaa

>gi568815594r:67372608_67644196|GENSCAN_predicted_peptide_8|174_aa
MVIIRVLENRSYEKNLSKISGISKQLAAKCQGIFEQKEYEHYWTELRGTTLFFYTDKKSI
IYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTELS
VPQNVSLLPGQVIKLHEVLEREKKRRIETEQSTSVEKEKEPTEDYVDVLNPMPA

>gi568815594r:67372608_67644196|GENSCAN_predicted_CDS_8|525_bp
atggtgataattagagtacttgaaaatagaagctatgagaaaaatctaagcaaaataagt
ggaatttccaagcaattggcagcaaagtgccagggaatctttgaacagaaggagtatgag
cattactggacagagttgagaggaactactcttttcttttataccgacaaaaagagtata
atatatgttgacaaattagacatagtagacctcacatgccttactgagcagaattcaact
gaaaagaactgtgcgaaattcacccttgttttgccgaaagaggaagtacaactgaagaca
gagaacacagaaagtggggaagaatggagaggcttcattcttacagtaacagagctgtca
gttccccaaaacgtgtcactcctacctgggcaagtaattaaactgcatgaagtcctagag
agagaaaagaaaaggaggattgagacagagcagagtacgtccgtggaaaaagagaaggaa
ccaactgaagattatgtggatgtactgaaccctatgccagcgtaa

>gi568815594r:67372608_67644196|GENSCAN_predicted_peptide_9|141_aa
MAVSRARTTVLQPVRQSEAPSQKKQKQKTTTTTKKRHHIIIIIIIIVVVVYGKAVGGKVA
KVNKASGSYFPKKGSSGASQLPLSGTLYKNIYRGKNDGWRVSVIVVQIEYATEPDVKQGT
RTSFIDNTTKIPGGKSSESFQ

>gi568815594r:67372608_67644196|GENSCAN_predicted_CDS_9|426_bp
atggcagtgagccgagctcgcaccactgtactccagcctgtgagacagagcgaggccccg
tctcaaaaaaaacaaaaacaaaaaacaacaacaacaacaaaaaaaagacatcatatcatc
atcatcatcatcatcatcgtcgtcgtcgtctatggcaaagctgtgggaggaaaagtggca
aaggtcaacaaggcctcaggatcatatttcccaaagaagggttcttctggagcatctcag
ttgcctctttccgggacactgtataaaaacatctacagaggtaaaaatgatggttggcgg
gtttcagtgattgtagtacagatagagtatgcaacagaacctgatgtcaaacagggtacc
aggacaagttttattgacaacaccaccaagattccaggaggaaagagctcagaatctttt
caataa

>gi568815594r:67372608_67644196|GENSCAN_predicted_peptide_10|387_aa
KPKSYTAADATLKINSQIKIDAHLNKVCPTTETIYNDEFYTKQDVIITALDNVEARRYVD
SRCLANLRPLLDSGTMGTKGHTEVIVPHLTESYNSHFESSFSHKPSLFNKFWQTYSSAEE
VLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNHKDLSADALLNILSEV
KIQEFKPSNKVVQTDETARKPDHVPISSEDERNAIFQLEKAILSNEATKSDLQMAVLSFE
KDDDHNGHIDFITAASNLRAKMYSIEPADRFKTKRIAGKIIPAIATTTATVSGLEKYGIE
PTMVVQGVKMLYVPVMPGHAKRLKLTMHKLVKPTTEKKYVDLTVSFAPDIDGDEDLPGPP
AQHLMEAIKAWGFYLLKHQPELYLNPF

>gi568815594r:67372608_67644196|GENSCAN_predicted_CDS_10|1164_bp
aaacctaaaagctacactgctgctgatgctactctgaaaataaattctcaaataaagata
gatgcacacctgaacaaagtatgtccaaccactgagaccatttacaatgatgagttctat
actaaacaagatgtaattattacagcattagataatgtggaagccaggagatacgtagac
agtcgttgcttagcaaatctaaggcctcttttagattctggaacaatgggcactaaggga
cacactgaagttattgtaccgcatttgactgagtcttacaatagtcattttgaaagttcc
ttttcccacaaaccttcattgtttaacaaattttggcaaacctattcatctgcagaagaa
gtcttacagaagatacagagtggacacagtttagaaggctgttttcaagttataaagtta
cttagcagaagacctagaaattggtcccagtgtgtagaattagcaagattaaagtttgaa
aaatattttaaccataaggacttatcagcagatgccctcttgaatattctttcagaagta
aagattcaggaattcaagccttccaataaggttgttcaaacagatgaaactgcaaggaaa
ccagaccatgttcctattagcagtgaagatgagaggaatgcaattttccaactagaaaag
gctattttatctaatgaagccaccaaaagtgaccttcagatggcagtgctttcatttgaa
aaagatgatgatcataatggacacatagatttcatcacagctgcatcaaatcttcgtgcc
aaaatgtacagcattgaaccagctgaccgtttcaaaacaaagcgcatagctggtaaaatt
atacctgctatagcaacaaccactgctacagtttctggcttggagaagtatggaattgag
ccaacaatggtggtacagggagtcaaaatgctttatgttcctgtaatgcctggtcatgca
aaaagattgaagttaacaatgcataaacttgtaaaacctactactgaaaagaaatatgtg
gatcttactgtgtcatttgctccagacattgatggagatgaagatttgccgggacctcca
gctcaacacctcatggaagccatcaaggcttggggcttctaccttctgaagcaccaacct
gagctgtacctcaaccccttttag