GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:29:34

Sequence gi568815584r:72571139_72871893 : 300755 bp : 45.94% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12704  12764   61  1  1   96   75    42 0.624   5.38
 1.02 Intr +  16715  16804   90  0  0   69   63    62 0.424   1.77
 1.03 Intr +  19299  19396   98  1  2   31  105    50 0.094   0.73
 1.04 Term +  29786  29962  177  1  0   81   42   276 0.286  19.99
 1.05 PlyA +  30597  30602    6                               1.05

 2.03 PlyA -  31128  31123    6                               1.05
 2.02 Term -  33490  33359  132  1  0   93   54    64 0.823   1.59
 2.01 Init -  35823  35764   60  0  0   76   89    48 0.673   4.95
 2.00 Prom -  36295  36256   40                              -5.66

 3.06 PlyA -  37112  37107    6                               1.05
 3.05 Term -  48846  48712  135  0  0   95   42   199 0.564  14.02
 3.04 Intr -  58598  58486  113  0  2  117   76    92 0.985  11.00
 3.03 Intr -  59743  59651   93  2  0  100  113    38 0.876   7.44
 3.02 Intr -  75359  75235  125  1  2   45   43    81 0.020  -0.47
 3.01 Init -  90654  90425  230  0  2   73   56   130 0.649   6.43
 3.00 Prom -  90718  90679   40                              -5.56

 4.03 PlyA -  91130  91125    6                               1.05
 4.02 Term -  96974  96948   27  2  0  105   54    26 0.671  -1.03
 4.01 Init -  98879  98814   66  2  0   96   95    75 0.830  10.07
 4.00 Prom - 100025  99986   40                              -4.46

 5.05 PlyA - 100700 100695    6                               1.05
 5.04 Term - 100770 100748   23  1  2   91   49    49 0.374  -0.23
 5.03 Intr - 103230 103102  129  1  0   38  105   145 0.842  11.87
 5.02 Intr - 108162 108075   88  0  1   89   65    39 0.732   1.24
 5.01 Init - 110373 110335   39  0  0   91   85    65 0.791   4.74
 5.00 Prom - 116928 116889   40                              -2.66

 6.17 PlyA - 117248 117243    6                               1.05
 6.16 Term - 118064 117897  168  2  0  108   44   123 0.808   7.78
 6.15 Intr - 120212 120181   32  0  2   17   66    34 0.362  -8.05
 6.14 Intr - 122075 121938  138  0  0  105   69   163 0.972  16.54
 6.13 Intr - 132116 132075   42  0  0   88   86    39 0.427   1.91
 6.12 Intr - 143363 143285   79  2  1   69   98    69 0.699   5.12
 6.11 Intr - 152590 152495   96  1  0  113  114   138 0.999  19.11
 6.10 Intr - 160796 160669  128  0  2  120   66   138 0.969  15.20
 6.09 Intr - 162743 162647   97  2  1   76   91    14 0.096   0.08
 6.08 Intr - 166289 166093  197  0  2   99    3    96 0.021   1.33
 6.07 Intr - 167422 167391   32  0  2   76   77    21 0.058  -2.43
 6.06 Intr - 170852 170698  155  2  2   80   62    72 0.048   2.67
 6.05 Intr - 171088 171000   89  2  2   96   64    56 0.072   3.69
 6.04 Intr - 178075 178058   18  2  0   89  105    18 0.097   0.18
 6.03 Intr - 182233 182084  150  2  0  115   81   144 0.823  16.53
 6.02 Intr - 200755 200595  161  0  2  101   99   230 0.941  25.03
 6.01 Init - 211841 211828   14  2  2   76  105     7 0.129   1.02
 6.00 Prom - 214210 214171   40                              -6.06

 7.00 Prom + 215608 215647   40                              -5.36
 7.01 Init + 217072 217164   93  0  0   65   83   115 0.457   9.08
 7.02 Term + 222596 222703  108  1  0   90   42   112 0.757   5.31
 7.03 PlyA + 223264 223269    6                               1.05

 8.02 PlyA - 224785 224780    6                               1.05
 8.01 Sngl - 227689 227414  276  1  0  100   43   186 0.811  10.68
 8.00 Prom - 230375 230336   40                              -6.76

 9.04 PlyA - 233777 233772    6                               1.05
 9.03 Term - 239885 239820   66  2  0   56   44   100 0.730   0.34
 9.02 Intr - 242023 241860  164  2  2  116   66   111 0.914  11.39
 9.01 Init - 242885 242876   10  2  1   86   98     0 0.765   1.52
 9.00 Prom - 243257 243218   40                              -5.86

10.04 PlyA - 245690 245685    6                               1.05
10.03 Term - 264907 264774  134  2  2   54   51   126 0.884   3.75
10.02 Intr - 265041 264946   96  1  0   54  103    73 0.158   5.38
10.01 Init - 277820 277784   37  2  1   64   98    35 0.158   2.27

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:72571139_72871893|GENSCAN_predicted_peptide_1|141_aa
MEDTRRLPALGPELSAHGDTEKDGFYSTLLHKSCSFDIPKASNNRETSSAMGCYSAITEQ
YNNLEESQKRYTEGKKARHKDVPLRERGKDEVGEGKEEEEEQGEEEEEEGGEEEEEGEEE
EEEKGEEEEEGEEEEEGEERE

>gi568815584r:72571139_72871893|GENSCAN_predicted_CDS_1|426_bp
atggaggacacccgccggcttcctgcactgggtccagagctgtctgctcatggggacaca
gagaaagatggattctactccactttgcttcacaaatcctgcagctttgacatcccaaaa
gcttccaacaacagggagacatcatcggccatgggatgttactcggcaataacagagcaa
tacaacaacctagaagaatctcaaaaacgttacactgagggaaaaaaagccagacataaa
gacgtacccctgcgggaaagaggcaaagatgaagtgggggaaggaaaggaggaggaggag
gagcagggagaggaagaggaggaggaggggggagaggaggaggaggagggggaggaggaa
gaggaggagaagggggaagaggaggaggagggggaggaggaggaagaaggggaggaaagg
gaatag

>gi568815584r:72571139_72871893|GENSCAN_predicted_peptide_2|63_aa
MAPTSASCKDLRKLSIEEEQRCMFRAVIQAILMDTTHRLMWLQTWRIKLDSNFRTSQWKQ
RAN

>gi568815584r:72571139_72871893|GENSCAN_predicted_CDS_2|192_bp
atggcaccaacatctgcttcttgtaaggacctcaggaagctttcaattgaggaggagcag
aggtgcatgttcagagcggtcatccaagccattttgatggacacaactcaccgtctcatg
tggctacagacttggaggataaaacttgacagcaactttagaacttcccagtggaagcaa
cgggccaactga

>gi568815584r:72571139_72871893|GENSCAN_predicted_peptide_3|231_aa
MRKGNLLLSWLLGPELPELSPRARKADLKDENLKFSCWWEPRKTAGVLTWPFLAELAEVG
VLADGMYLGAVSVAQQSLGVLSLTVAKGLLSEVVGIFLDALRKGSALAMLRALMGLESAS
FFKAYNPSNERGNTRHHIMGLAELEALENGHPTCLQFTLNMTEAVKTYKWQCIECKSCIL
CGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGNDDEVNNKNSNRYYYY

>gi568815584r:72571139_72871893|GENSCAN_predicted_CDS_3|696_bp
atgaggaaagggaaccttctgctgagctggcttctggggcctgagcttccagagctgtcc
ccaagggctaggaaggccgacctgaaggatgagaacctcaaattcagttgctggtgggag
ccaaggaagacggcgggtgttctaacatggccctttctggctgagctggcggaagtgggc
gttttggccgatgggatgtatctcggcgctgtgtctgtggcccagcaaagccttggagtc
ctgtccctgacagtggccaaagggcttttatctgaggttgtgggcatctttctggatgca
cttcgtaaaggcagtgcactggcgatgctgagggcactcatgggcttggagtcagcatcc
ttctttaaagcatataatccttcaaatgaaagaggcaacacaaggcaccatataatgggt
ttggcagaactggaagctctggagaacggtcacccaacctgcctgcagtttaccctgaac
atgaccgaggctgtcaagacctacaagtggcagtgcatagagtgcaaatcctgtatcctc
tgtgggacctcagagaatgatgaccagctactcttctgcgatgactgtgaccgaggctat
cacatgtactgtttaaatcccccggtggctgagcccccagaaggtaatgatgatgaagtc
aacaataagaacagcaacagatactactactactag

>gi568815584r:72571139_72871893|GENSCAN_predicted_peptide_4|30_aa
MEKATHLTDSPKNDRLRGPSQKIAVIYIFV

>gi568815584r:72571139_72871893|GENSCAN_predicted_CDS_4|93_bp
atggagaaggccacccacctcactgacagtcccaagaatgaccggctgcgaggtcctagt
caaaagatagcagtcatctacatttttgtgtga

>gi568815584r:72571139_72871893|GENSCAN_predicted_peptide_5|92_aa
MGPLFSLAPAESLDAWDAALVSAEPRRVAVADGWFVPASHSFSQKGPDGTVIPNNYCDFC
LGGSNMNKKSGRPEELVSCADCGRSVQMNDMA

>gi568815584r:72571139_72871893|GENSCAN_predicted_CDS_5|279_bp
atggggcctctgttctcactggctcctgctgagtccctggatgcttgggacgcagctctg
gtctcagcagaacccagacgagtggctgttgccgacggctggtttgtccctgccagtcat
tctttctcccagaaaggaccggatggaacagtcattcccaataactactgtgacttctgc
ttggggggctccaacatgaacaagaagagtgggcggcctgaagagctggtgtcctgcgca
gactgtggacgctctgtgcaaatgaacgacatggcgtaa

>gi568815584r:72571139_72871893|GENSCAN_predicted_peptide_6|531_aa
MKQERLGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGL
APGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPGQCPLELGWVCDGKGHADARVSEPAA
IHLEACTGSFVSSGWPHEKGSWSELCWCSAGLWELGLAEEVGWQQAVGRTVARLLLSVHG
HVLQWDLAEPRVEHEFCIYLVCWQLSDSSRLHPVNELGGSNNPVEALLSVHWVAGLGHLC
QKLVALICTQEDGCPVCSPKEKKPLLFAGNFCVCICSVLMDARLPLPHGLVRLPLFLVEE
VESAEVELPLKKDGFTSESTTLEALLRGEGVEKKVDAREEESIQEIQRVLENDENVEEGN
EEEDLEEDIPKRKNRTRGRARGSAGGRRRHDAASQEDHDKPYVCDRIQLKISIKGGLKEV
CGKRYKNRPGLSYHYAHTHLASEEGDEAQDQETRSPPNHRNENHRRPYFQTKSQYELCLQ
QSPWLIPRLVLLLKGQSGLLEPALTFPAPAHAALCCKLSNPLPLLIAWPPS

>gi568815584r:72571139_72871893|GENSCAN_predicted_CDS_6|1596_bp
atgaagcaggaaaggctcggggaccagttctacaaggaagccattgagcactgccggagt
tacaactcacggctgtgtgcagagcgcagcgtgcgtcttcccttcctggactcacagact
ggggtggcccagaacaactgctacatctggatggagaagaggcaccgaggcccaggcctt
gccccgggccagctgtatacataccctgcccgctgctggcgcaagaagagacgattgcac
ccacctgaagatccaaaactgcggctgctggagataaaacctggtcagtgccctctggag
cttggctgggtctgtgatgggaaaggtcatgctgatgcaagagtgtcagagcctgcagcc
atccatctggaggcctgcaccggcagcttcgtcagctctggttggcctcatgagaagggg
agctggagcgagctctgctggtgttctgcagggctctgggagcttgggctggccgaggag
gtgggctggcagcaggcagtgggcaggacagtggcacggctgctgctgagtgtccacggt
catgttttgcagtgggacctggcagagccacgtgtagagcatgagttctgcatttacctg
gtctgctggcagctcagtgactcatctcgcctgcatcctgttaatgagctcggtggctcc
aacaacccagtggaagctttgctttcagtgcattgggtggcaggcttggggcacctgtgt
caaaagcttgtggctttgatctgcacccaagaggatggctgccctgtctgtagccctaaa
gagaagaagccattgctctttgctggaaatttctgtgtgtgcatttgttcagttttaatg
gatgcccgcttgccgcttcctcatggattggtcagactccctctgtttctggtggaggaa
gtggaaagtgcagaagtggagcttcccctgaagaaggatgggttcacctcagagagcacc
acgctggaagccttgctccgtggcgagggggttgagaagaaggtggatgccagggaggag
gaaagcatccaggaaatacagagggttttggaaaatgatgaaaatgtagaagaagggaat
gaagaagaggatttggaagaggatattcccaagcgaaagaacaggactagaggacgggct
cgcggctctgcagggggcaggaggaggcacgacgccgcctctcaggaagaccacgacaaa
ccttacgtctgtgacagaattcagcttaaaataagcatcaagggtggcctgaaagaagtc
tgtggcaagcgctacaagaaccgaccggggctcagctaccactatgctcacactcacctg
gccagcgaggagggggatgaagctcaagaccaggagactcggtccccacccaaccacaga
aatgagaaccacaggcgaccctacttccaaaccaagtcacagtatgagctttgtcttcag
cagagcccatggctcatcccgcgcctggtgctgctgctgaaagggcagagtggactgctg
gagccggcgctgaccttccccgcccccgcccatgctgccctgtgctgcaagctcagcaat
ccactgccactcctgatcgcctggcccccaagctga

>gi568815584r:72571139_72871893|GENSCAN_predicted_peptide_7|66_aa
MAAASRPPILLDHRMQEDYTVSWISSLQEQELPCIDDAGKFNVIFIGPAQQSRCGSLITN
NNASSM

>gi568815584r:72571139_72871893|GENSCAN_predicted_CDS_7|201_bp
atggcagctgcatctcgaccaccaatcctactggaccacaggatgcaggaggactacact
gtgtcctggatctcgtcattacaagagcaggagctcccttgcatagatgatgctggcaaa
ttcaacgtgattttcattggacctgcccagcagtccagatgtgggagcctaataacaaat
aacaatgccagctccatgtga

>gi568815584r:72571139_72871893|GENSCAN_predicted_peptide_8|91_aa
MKDFHLAVPDLGSELSYTDLKTWPKAGTEVVEEPYLECGASDFPYWAEVSGKGKGSGCIL
SSWQPLLQPTRDPEFSMGTLELEDTSCRYHV

>gi568815584r:72571139_72871893|GENSCAN_predicted_CDS_8|276_bp
atgaaggatttccatttagcagtgccagacctgggctcggagctcagctacactgatctc
aagacttggcccaaggcaggaactgaggttgtggaagagccatacttggagtgtggagct
tctgacttcccatactgggcagaagtctctggaaagggaaagggatctggctgcatcctt
agcagctggcagcccctgctgcagccaactagggaccccgagttctccatgggaactctg
gagctagaggatacatcttgcaggtatcatgtctga

>gi568815584r:72571139_72871893|GENSCAN_predicted_peptide_9|79_aa
MGKEFGAKPIRDKGMLGPCLDLRFGGLLPFLVSWFEAFSKEPPKSKDSVERLMPRGDALP
EASPEADAGTVVALQPAEL

>gi568815584r:72571139_72871893|GENSCAN_predicted_CDS_9|240_bp
atggggaaagaatttggagccaagcccatcagggacaaaggaatgctgggaccttgtttg
gatctcagatttggtggtttgctccccttcctggtgtcatggtttgaagcattttcgaag
gagcccccgaaaagcaaggacagtgtggagaggctgatgcccagaggcgatgcgcttcct
gaagcctcaccagaagcagatgccggcaccgtggttgctctacagcctgcagaactgtga

>gi568815584r:72571139_72871893|GENSCAN_predicted_peptide_10|88_aa
MYVKRLVQNLAHKAPTPSENTMISLLFLTGFFFGPGFPQQTWRPSSPRGTRVVTAGPRDV
WECGLRRVYLEHNAQVLGVEESNKGDEP

>gi568815584r:72571139_72871893|GENSCAN_predicted_CDS_10|267_bp
atgtatgtgaagcgcttagtacagaacctggcacacaaggctccaaccccttctgagaac
acaatgatcagcctcctgttcctcactggcttcttctttggacctggatttccacagcag
acctggaggccatcatctccccgaggcacccgtgtggtgacggctggccctcgggatgtc
tgggaatgtggtctccggcgggtgtatcttgaacacaacgcacaggttttaggtgtcgaa
gagtcaaataagggggatgaaccatga