GENSCAN 1.0	Date run:  7-Nov-116	Time: 19:32:05

Sequence gi568815591r:88179401_88384269 : 204869 bp : 38.22% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  13716  13839  124  0  1   70   75   112 0.036   7.77
 1.02 Term +  18006  18152  147  2  0   51   53    83 0.047  -1.98
 1.03 PlyA +  19112  19117    6                               1.05

 2.07 PlyA -  19202  19197    6                               1.05
 2.06 Term -  20191  20078  114  1  0   87   49    81 0.678   1.69
 2.05 Intr -  29165  29107   59  0  2   88   95    87 0.777   7.08
 2.04 Intr -  30052  29939  114  2  0  101  109   162 0.999  19.10
 2.03 Intr -  37791  37722   70  0  1   59  111    92 0.910   6.44
 2.02 Intr -  39608  39459  150  2  0   -1   71   184 0.628   7.24
 2.01 Init -  40626  40576   51  0  0   94   98    46 0.970   7.45
 2.00 Prom -  42773  42734   40                              -3.65

 3.08 PlyA -  44224  44219    6                               1.05
 3.07 Term -  92723  92577  147  2  0   60   47   100 0.403   0.02
 3.06 Intr - 103768 103241  528  1  0   34   99   378 0.980  25.70
 3.05 Intr - 104871 104414  458  1  2   60  110   282 0.004  19.61
 3.04 Intr - 127764 127392  373  0  1   92   94   256 0.317  20.31
 3.03 Intr - 129399 129274  126  0  0   23   44   129 0.645   1.96
 3.02 Intr - 131898 131698  201  0  0   68   51    73 0.217   0.16
 3.01 Init - 134270 134205   66  2  0   51   64   109 0.641   5.92
 3.00 Prom - 139009 138970   40                              -2.55

 4.04 PlyA - 139168 139163    6                               1.05
 4.03 Term - 150690 150442  249  0  0   76   39   145 0.483   3.12
 4.02 Intr - 151397 151233  165  2  0  105   80    71 0.510   7.24
 4.01 Init - 155022 154906  117  0  0   69   59    72 0.503   2.65
 4.00 Prom - 168126 168087   40                              -2.85

 5.00 Prom + 180630 180669   40                              -4.15
 5.01 Init + 202091 202201  111  1  0   56   91    89 0.947   6.27
 5.02 Intr + 202778 202898  121  1  1   78   81    64 0.489   3.85
 5.03 Intr + 203001 203053   53  1  2   46   98    22 0.458  -3.29
 5.04 Intr + 203273 203554  282  1  0   40   87   259 0.956  17.69
 5.05 Term + 203708 203797   90  1  0  111   40    70 0.453   1.24
 5.06 PlyA + 204247 204252    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  30712  30583  130  1  1   92   69    86 0.855   7.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:88179401_88384269|GENSCAN_predicted_peptide_1|90_aa
XTLSPAKSPSSSTGSIASSRKYPYPMPPLPDEDKKVNRQSARFADAGAHSAADGLLPGNH
LSHPSIPSHPSEPAPQQCVLLRLSKCTKDT

>gi568815591r:88179401_88384269|GENSCAN_predicted_CDS_1|273_bp
nngactttatctcctgccaagtctccttcttcatcaactgggtctattgcctccagcaga
aaatacccttacccaatgcctccacttcctgatgaggacaagaaagtgaaccgacaaagt
gccaggtttgctgatgcaggagcccactctgctgccgatgggctgctccctggaaatcat
ctatcccatccgtccatcccatctcatcccagtgagccagcccctcagcagtgtgtgctg
ctgagattaagcaagtgcaccaaagacacatga

>gi568815591r:88179401_88384269|GENSCAN_predicted_peptide_2|185_aa
MAYPGHPGAGGGYYPGGPSVVKEENLIRQNDVYVFPVSQYGGAPGGPAFPGQTQDPLYGY
FAAVAGQDGQIDADELQRCLTQSGIAGGYKRFRLSPQAVNSIAKRYSTNGKITFDDYIAC
CVKLRALTDSFRRRDTAQQGVVNFPYDDIACALGIISSLQRSEDHATSHLNKEWLEDSSC
GQSTP

>gi568815591r:88179401_88384269|GENSCAN_predicted_CDS_2|558_bp
atggcgtacccggggcatcctggcgccggcggcgggtactacccaggcgggccctcagtg
gtgaaagaagaaaacttgattcggcagaatgacgtgtatgtgtttcctgtttcacagtat
ggaggggctcccggagggcctgcgtttcccggacaaactcaggatccgctgtatggttac
tttgctgctgtagctggacaggatgggcagatagatgctgatgaattgcagagatgtctg
acacagtctggcattgctggaggatacaaacgatttaggttgagtccccaggctgtgaat
tcaattgcaaaacgatacagcaccaatggaaagatcaccttcgacgactacatcgcctgc
tgcgtcaaactgagggctcttacagacagctttcgaagacgggatactgctcagcaaggt
gttgtgaatttcccatatgatgatattgcatgtgccctggggatcatttccagcctgcag
cgttcagaggaccatgccacttcccatctaaataaagagtggctggaggacagttcatgt
ggccagtccactccataa

>gi568815591r:88179401_88384269|GENSCAN_predicted_peptide_3|632_aa
MSESNECRGNNRQQSKGEQVKEWPLSQADFLLTVTQACFLAVRQPSVKSVLLPRLFQERF
LLAQLRSHAIIGPITVDKALCFEWPGLSQLTVKQPQEGLSADIPEKGIATTEDSSMHVTA
PEDLSVTKDIQERGIPRPLQTSITLGCTDAKGSGVTLKIPASRGSAAPSAAPQYRSSGPS
SCWDSQLELFQETSSFPLLLRNPADRPALLWLLIAARATSHSAELQARRNFPLPARPAAR
TVGAGRFLLGSASPSVMEKTCIDALPLTMNSSEKQETVCIFGTGDFGRSLGLKMLQCGYS
VVFGSRNPQKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTELTEVLNGKILVDI
SNNLKINQYPESNAEYLAHLVPGAHVVKAFNTISAWALQSGALDASRQVFVCGNDSKAKQ
RVMDIVRNLGLTPMDQGSLMAAKEIEKYPLQLFPMWRFPFYLSAVLCVFLFFYCVIRDVI
YPYVYEKKDNTFRMAISIPNRIFPITALTLLALVYLPGVIAAILQLYRGTKYRRFPDWLD
HWMLCRKQLGLVALGFAFLHVLYTLVIPIRYYVRWRLGNLTVTQGEKGPQAKRYQHSYHQ
LSACRGGRQEELVVGSANYNYYTNQLETIQRV

>gi568815591r:88179401_88384269|GENSCAN_predicted_CDS_3|1899_bp
atgtcggaaagtaatgagtgccgtggaaataacagacagcagagtaaaggggagcaagtg
aaggagtggcctctttctcaggctgactttctcctcacagtgacccaggcttgcttttta
gcagtccgacaaccctctgtaaagagtgtgctgcttcccaggttgttccaggaaagattc
ctattggcccaactcaggtcacatgccatcattggaccaatcactgtggacaaggctttg
tgctttgaatggccaggtctaagtcagttaactgtaaaacagcctcaggaaggtctttca
gcagatattccagaaaaaggcattgctaccacagaagacagctccatgcatgttactgcc
cctgaggacctttcagtaacaaaagacatacaggaaagggggattcctagacctctccaa
acctcaatcaccctgggatgcacagatgccaagggctcgggtgtaacccttaaaatcccc
gcttcccgggggtcagcggcaccatcagcagcaccgcagtatagaagttccggtccttcc
agctgctgggattctcagcttgaactcttccaggaaacaagttcttttccgcttctcttg
cgaaatccagcagaccgtcccgcccttctctggcttcttatagcagcgagagccacaagc
cacagcgctgagctgcaggcgcggcgaaacttccctctacccgcccggcccgcggcgcgc
accgttggcgctggacgcttcctccttggaagcgcctctccctcagttatggagaaaact
tgtatagatgcacttcctcttactatgaattcttcagaaaagcaagagactgtatgtatt
tttggaactggtgattttggaagatcactgggattgaaaatgctccagtgtggttattct
gttgtttttggaagtcgaaacccccagaagaccaccctactgcccagtggtgcagaagtc
ttgagctattcagaagcagccaagaagtctggcatcataatcatagcaatccacagagag
cattatgattttctcacagaattaactgaggttctcaatggaaaaatattggtagacatc
agcaacaacctcaaaatcaatcaatatccagaatctaatgcagagtaccttgctcatttg
gtgccaggagcccacgtggtaaaagcatttaacaccatctcagcctgggctctccagtca
ggagcactggatgcaagtcggcaggtgtttgtgtgtggaaatgacagcaaagccaagcaa
agagtgatggatattgttcgtaatcttggacttactccaatggatcaaggatcactcatg
gcagccaaagaaattgaaaagtaccccctgcagctatttccaatgtggaggttccccttc
tatttgtctgctgtgctgtgtgtcttcttgtttttctattgtgttataagagacgtaatc
tacccttatgtttatgaaaagaaagataatacatttcgtatggctatttccattccaaat
cgtatctttccaataacagcacttacactgcttgctttggtttacctccctggtgttatt
gctgccattctacaactgtaccgaggcacaaaataccgtcgattcccagactggcttgac
cactggatgctttgccgaaagcagcttggcttggtagctctgggatttgccttccttcat
gtcctctacacacttgtgattcctattcgatattatgtacgatggagattgggaaactta
accgttacccagggggaaaaaggcccacaggcaaagaggtaccagcattcataccaccag
ctttcagcttgtagaggtggccgccaagaggaactcgtagttggcagtgccaactacaac
tactacaccaaccagctggaaactatacaaagagtatga

>gi568815591r:88179401_88384269|GENSCAN_predicted_peptide_4|176_aa
MGSQSNINSPQSRTSSKCESSLEKDAGRINNQEQETVPLLSAEKALLSAPGHPVLSFFCC
LHPLAILCPSLAEPSAFMGLRGEEVLGLVHEWPQSRRPGSAAAVWVAAEAWGAPIPIQKG
QGSHWLHGVCSPIHDSPPQPMGITAAATAIKTLAWYEGKQRLFQTFLHISNFIRLP

>gi568815591r:88179401_88384269|GENSCAN_predicted_CDS_4|531_bp
atgggaagccaaagtaatattaatagtccccaaagtcgtacgtcaagcaaatgcgaaagt
tctctagagaaagatgctggtagaataaataatcaagaacaggagactgtacctctgcta
tcagcagagaaggcactcctctctgcacctggtcatcctgtcctgtcctttttctgctgt
cttcatcctctggccatcctctgcccttctctggctgagcccagtgcttttatgggcctc
agaggggaggaagtgctcggattggtccatgagtggccacagagcaggaggcctgggtct
gcagctgcagtttgggtggctgcagaagcatggggagctcccatcccaattcagaagggg
cagggctctcactggctccatggagtgtgcagccccatccatgattccccgccgcagccc
atgggcatcacggcagcagccactgccatcaaaactctggcttggtatgaagggaaacag
agactcttccagaccttcttgcatatttccaacttcattagactaccctga

>gi568815591r:88179401_88384269|GENSCAN_predicted_peptide_5|218_aa
MIRYFGDYWTQALLTLIPGDPKHPRGPPVKVGVYGGQGYINSLALCHNFIWRELNRFSLL
QDVPLVRYIDNIMLIGSIKFLGVQWCGACRDIPSKDPADPMVLEVSVADRDAVWSIWQAL
IDESQQRPLGFWSKSLPSSADNYSPFERQLLAYYWALVETERSTMGHQVTMLPELPVMNW
VLSDPSSHKPSPMALWGVPYDQLTEEEKSRAWFANGSA

>gi568815591r:88179401_88384269|GENSCAN_predicted_CDS_5|657_bp
atgatcagatattttggagactactggacacaggctctgctgacattgattccaggggat
ccaaaacatcctcgtggtcctccagttaaagtaggggtttatggaggtcaggggtatatt
aactctctggctttgtgtcacaattttatttggagagaacttaatcgcttttcacttctg
caagatgtcccactggtccgttacattgacaacattatgctgattggatccataaaattt
ctaggggtccagtggtgtggggcctgtcgagatattccttctaaggacccagcagatcca
atggtgctcgaggtgtcagtggcagatagggatgctgtttggagcatttggcaggctctt
atagatgaatcacagcagaggcctctaggattttggagcaagtctctaccatcttctgca
gataactactctccttttgagagacagctcttggcctattactgggctttggtggaaact
gaacgttcaactatgggtcatcaagtcaccatgctacctgaactgcctgtcatgaactgg
gtgctttctgacccatctagccataaaccttcaccaatggccttatggggagttccctat
gatcagttgacagaggaagagaagagtagggcctggttcgcaaatggttctgcatga