GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:59:29

Sequence gi568815591f:77596470_77879165 : 282696 bp : 39.95% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4195   4337  143  0  2   69   87    78 0.398   4.03
 1.02 Intr +  10766  10832   67  2  1   41   78    48 0.243  -2.91
 1.03 Intr +  14479  14577   99  0  0  104   66   158 0.999  14.59
 1.04 Intr +  22011  22096   86  2  2   98   72   122 0.974   9.30
 1.05 Intr +  30236  31206  971  2  2   82   85   759 0.984  64.71
 1.06 Intr +  39262  39380  119  2  2    6  100   100 0.528   2.26
 1.07 Intr +  57390  57528  139  2  1   12   81   122 0.005   3.02
 1.08 Intr +  66461  66722  262  0  1  -86  106   201 0.053   0.12
 1.09 Term +  76103  76199   97  2  1   42   48   143 0.130   2.16
 1.10 PlyA +  77622  77627    6                               1.05

 2.00 Prom +  87490  87529   40                              -4.85
 2.01 Init + 100001 100586  586  1  1   94   90   504 0.900  44.61
 2.02 Intr + 101261 101366  106  0  1  102   56    80 0.873   4.55
 2.03 Intr + 106462 106570  109  1  1   42   80    78 0.570   1.77
 2.04 Intr + 114515 114626  112  1  1   40   28    57 0.003  -6.07
 2.05 Intr + 139941 140057  117  1  0  128  106    84 0.594  13.72
 2.06 Intr + 152955 153595  641  1  2   63  110   463 0.543  36.85
 2.07 Intr + 169026 169163  138  2  0   91   69    56 0.881   3.74
 2.08 Intr + 172192 172334  143  0  2   53   95   119 0.863   7.33
 2.09 Intr + 176678 176845  168  2  0   67   21   173 0.978   6.64
 2.10 Intr + 181869 181977  109  0  1   98   68    61 0.999   4.47
 2.11 Term + 182061 182699  639  2  0   68   32   457 0.999  31.32
 2.12 PlyA + 182745 182750    6                               1.05

 3.00 Prom + 185539 185578   40                              -3.95
 3.01 Init + 197792 197869   78  1  0   51  109    50 0.255   4.51
 3.02 Term + 202470 202916  447  2  0   21   41   356 0.870  18.43
 3.03 PlyA + 204489 204494    6                               1.05

 4.05 PlyA - 205884 205879    6                               1.05
 4.04 Term - 235980 235873  108  0  0   58   48   103 0.196   0.83
 4.03 Intr - 249857 249673  185  0  2   17   77   140 0.235   4.39
 4.02 Intr - 252015 251817  199  0  1  -21   32   153 0.011  -3.20
 4.01 Init - 257501 257445   57  2  0   90   86    56 0.069   6.96
 4.00 Prom - 263426 263387   40                              -5.85

 5.07 PlyA - 263990 263985    6                               1.05
 5.06 Term - 275380 274687  694  0  1   32   49   342 0.728  16.75
 5.05 Intr - 275762 275508  255  1  0   54   68   307 0.711  20.94
 5.04 Intr - 276190 276070  121  2  1   73   98    34 0.943   1.53
 5.03 Intr - 276911 276809  103  2  1   24   19    98 0.500  -4.67
 5.02 Intr - 277231 277065  167  2  2   59   50   167 0.778   8.76
 5.01 Init - 277623 277476  148  0  1   24   72   100 0.837   2.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  42750  42824   75  2  0   93   43    98 0.886   2.66
S.002 Init + 257938 258028   91  0  1   83   67    48 0.843   2.93
S.003 Term - 262673 262561  113  0  2   31   49   148 0.879   2.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:77596470_77879165|GENSCAN_predicted_peptide_1|660_aa
ESRRLYQFHYVNWPDHDVPSSFDSILDMISLMRKYQEHEDVPICIHCSAGCGRTGAICAI
DYTWNLLKAGEQYELVHRAIAQLFEKQLQLYEIHGAQKIADGVNEINTENMVSSIEPEKQ
DSPPPKPPRTRSCLVEGDAKEEILQPPEPHPVPPILTPSPPSAFPTVTTVWQDNDRYHPK
PVLHMVSSEQHSADLNRNYSKSTELPGKNESTIEQIDKKLERNLSFEIKKVPLQEGPKSF
DGNTLLNRGHAIKIKSASPCIADKISKPQELSSDLNVGDTSQNSCVDCSVTQSNKVSVTP
PEESQNSDTPPRPDRLPLDEKGHVTWSFHGPENAIPIPDLSEGNSSDINYQTRKTVSLTP
SPTTQVETPDLVDHDNTSPLFRTPLSFTNPLHSDDSDSDERNSDGAVTQNKTNISTASAT
VSAATSTESISTRKVLPMSIARHNIAGTTHSGAEKEISEIQGVNNNKISFFSDTPVRSEW
SELQSQERSEQKKSESLGVLLACKEAQAKPWTDERPRGEIPNKSQPTSHGRKSYSSALMQ
NEKKEKGRKEGRKEGTKEGDREREEGERGRKEGRKETERGKKEREEGRRERKEGEKKEGE
RKKEGKKEKERKEKEKEKERKKKEEERRNKHAEILAKTAVDETAKGEPTIMVGVKLDELK

>gi568815591f:77596470_77879165|GENSCAN_predicted_CDS_1|1983_bp
gaatctcgtaggctgtatcagtttcattatgtgaactggccagaccatgatgttccttca
tcatttgattctattctggacatgataagcttaatgaggaaatatcaagaacatgaagat
gttcctatttgtattcattgcagtgcaggctgtggaagaacaggtgccatttgtgccata
gattatacgtggaatttactaaaagctggggagcaatatgaacttgttcatagagctatt
gcccaactgtttgaaaaacagctacaactatatgaaattcatggagctcagaaaattgct
gatggagtgaatgaaattaacactgaaaacatggtcagctccatagagcctgaaaaacaa
gattctcctcctccaaaaccaccaaggacccgcagttgccttgttgaaggggatgctaaa
gaagaaatactgcagccaccggaacctcatccagtgccacccatcttgacaccttctccc
ccttcagcttttccaacagtcactactgtgtggcaggacaatgatagataccatccaaag
ccagtgttgcatatggtttcatcagaacaacattcagcagacctcaacagaaactatagt
aaatcaacagaacttccagggaaaaatgaatcaacaattgaacagatagataaaaaattg
gaacgaaatttaagttttgagattaagaaggtccctctccaagagggaccaaaaagtttt
gatgggaacacacttttgaataggggacatgcaattaaaattaaatctgcttcaccttgt
atagctgataaaatctctaagccacaggaattaagttcagatctaaatgtcggtgatact
tcccagaattcttgtgtggactgcagtgtaacacaatcaaacaaagtttcagttactcca
ccagaagaatcccagaattcagacacacctccaaggccagaccgcttgcctcttgatgag
aaaggacatgtaacgtggtcatttcatggacctgaaaatgccatacccatacctgattta
tctgaaggcaattcctcagatatcaactatcaaactaggaaaactgtgagtttaacacca
agtcctacaacacaagttgaaacacctgatcttgtggatcatgataacacttcaccactc
ttcagaacacccctcagttttactaatccacttcactctgatgactcagactcagatgaa
agaaactctgatggtgctgtgacccagaataaaactaatatttcaacagcaagtgccaca
gtttctgctgccactagtactgaaagcatttctactaggaaagtattgccaatgtccatt
gctagacataatatagcaggaacaacacattcaggtgctgaaaaagaaatttcagaaatt
caaggtgttaataacaataagatttcatttttctcagatacacctgtaagatcggaatgg
agtgaacttcaaagtcaggaacgatctgaacaaaaaaagtctgaatctcttggggtcctg
ctggcatgtaaagaagctcaggctaagccatggacggatgagagaccacgtggggagatt
cccaacaagtcccaacccacatcacatggaagaaagtcatacagcagcgccctcatgcag
aatgaaaagaaagaaaaaggaaggaaggaaggaaggaaggaaggaacgaaggaaggagac
agagagagggaagaaggagagagaggaaggaaggagggaaggaaggagacagagagagga
aagaaggagagagaggaaggaaggagagagaggaaagaaggagagaagaaggagggagag
agaaagaaagaaggaaagaaagaaaaagaaagaaaagaaaaagagaaagaaaaagaaaga
aagaaaaaagaggaagaaagaagaaacaaacatgcggaaatactggcaaagacagctgta
gatgaaacagccaagggagagccaacaattatggttggtgttaagttggatgaattgaaa
taa

>gi568815591f:77596470_77879165|GENSCAN_predicted_peptide_2|955_aa
MAEPPSPVHCVAAAAPTATVSEKEPFGKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEG
GSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSASASL
SQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPKEKREKERRRHGLGGAREAG
GASREENGEVKPLPRANDKTRSFDDFSPDQAAAECLSIRKRRILKGSCQTGYLRKALFSD
TVTLGIKASTYGFWGGMIQSIVKGLAETFNFWIHIWELNDLQYISALFACSEEMPDYHLE
KQLADKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKK
VKKKKKKKHKENEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGILNDNIKDYVGKNLDTK
NYDSKIPENSEFPFVSLKEPRVQNNLKRLDTLEFKQLIHIEHQPNGGASVIHAYSNELSH
LSPMEMERFAEEFVGLVFSENENSAAFYVMGIVHGAATYLPDFLDYFSFNFPNSPVKMEI
LGKKDIETTTMSNFHAQVKRTYSHGTYRAGPMRQISLVGAVDEEVGDYFPEFLDMLEESP
FLKCTLPWGTLSSLKLQSRKDSDDGPIMWVRPGEQMIPVADMPKSPFKRKRTTNEIKNLQ
YLPRTSEPREMLFEDRTRAHADHIGQGFERQTTAAVGVLKAVHCGEWPDQPRITKDVICF
HAEDFLEVVQRMQLDLHEPPLSQCVQWVDDAKLNQLRREGIRYARIQLYDNDIYFIPRNV
VHQFKTVSAVCSLAWHIRLKLYHSEEDTSQNTATHETGTSSDSTSSVLGPHTDNMICAVS
KASLDSVFSDKLHSKYELQQIKHEPIASVRIKEEPVNVNIPEKTTALNNMDGKNVKAKLD
HVQFAEFKIDMDSKFENSNKDLKEELCPGNLSLVDTRQHSSAHSNQDKKDDDILC

>gi568815591f:77596470_77879165|GENSCAN_predicted_CDS_2|2868_bp
atggcggaaccgccgagccccgtgcactgtgtcgctgccgcggcccccaccgccaccgtc
tcggagaaagaaccgtttggcaagctgcaactctcctcccgggaccctccgggttctctg
tccgccaagaaggtccggactgaggagaagaaggcaccgcggagagtgaacggagaaggg
ggcagcggcgggaacagcaggcagctgcagccgccggcagcaccttcgcctcagagctat
ggcagccccgcgtcttggagctttgcccctctgtctgctgctccctccccgtcctcttct
cggagcagtttctctttctccgctggcacggccgttccctcctcagcctccgcttccttg
tctcagccggtgccgcgcaaactgctggtccctcctacgctgctgcacgctcagcctcac
catctcctcctgcccgccgccgccgccgctgcctcggctaacgccaagtcgcgcagacct
aaggagaagcgggagaaggagaggaggaggcacggtctcggtggggcccgagaggccggc
ggggcctcccgggaggagaacggggaggtgaagccgctgccccgagcaaatgataaaacc
aggagctttgacgatttttcgccagatcaagcggctgcagaatgtttgagcattagaaaa
aggcgaattcttaagggttcttgtcagacaggttacctccgaaaagccttattttcagat
acagtcacattgggcattaaggcttcaacatatggattttggggaggcatgattcagtcc
atagtgaagggcttggcagagaccttcaacttctggatacatatttgggaactgaatgac
ttgcagtatatttcagccctttttgcctgctcagaagagatgcccgattatcatttagaa
aaacaattggctgataaaatcaaagacaaaattaaagagagagacaaagaaaaagaaaga
gaaaaaaagaaacataaagtaatgaatgagatcaagaaagagaatggagaagtaaagatt
ttgctgaaaagtgggaaggagaaaccaaaaacaaatatagaagacttacaaattaaaaag
gtaaagaagaaaaagaaaaagaaacacaaagagaatgaaaaacggaagcgtccgaaaatg
tatagcaaatctattcagaccatctgctcaggattgctaactgatgttgaagatcaagca
gccaaaggcatcctaaatgataacataaaagattacgttgggaagaatttggataccaag
aactatgattccaaaattccagagaacagtgagtttccatttgtctcattaaaggagcca
cgagttcagaataacctcaaaaggttggacactttggaatttaaacaactcattcatata
gagcaccagcctaatggaggtgcatcggttatccatgcctacagtaacgaactctcccac
ctgtctcctatggagatggagaggtttgcagaagagtttgtgggtctagtgttcagtgaa
aatgaaaactctgcagctttctacgtgatgggtattgttcatggggcagctacttattta
cctgactttttagactatttttcatttaattttcccaattcaccagtgaaaatggagata
ttgggaaagaaagatatagagacaacgactatgtccaattttcatgctcaggtaaaaaga
acgtattctcatggtacttacagagctggcccaatgagacaaataagcttggtgggagca
gttgatgaagaagtaggagattatttccctgagttccttgacatgttggaagagtcacca
tttttaaaatgtacactgccatgggggacgctatctagtctaaaattacagagtcgaaaa
gatagtgatgatggtcccatcatgtgggttcgtccaggagaacaaatgatccctgtggct
gatatgccaaagtcacctttcaaaaggaaaagaactaccaatgaaataaaaaatcttcag
tacctacctcgaacaagtgagccccgtgagatgctctttgaagacaggacaagagctcat
gcagatcatataggacaaggttttgaacgacagactacagctgctgttggagtgctgaag
gctgtgcactgtggagagtggcctgatcaaccccgtataaccaaagatgtaatttgtttt
catgctgaagatttcttagaagtagttcaacgaatgcagttagatttacatgaacctcca
ctgtcccagtgtgtccaatgggttgatgatgcaaaactgaatcaactgaggagggaaggc
attcgctatgccaggattcagctatatgataatgacatttattttattccaaggaatgtt
gttcatcagttcaagacagtttcagctgtatgcagtttagcatggcatattcggctcaaa
ttatatcactcagaggaggacacttctcagaatacagctactcatgaaacaggcacatca
tcagattccacatcatctgttcttggacctcacactgacaacatgatttgtgctgtaagc
aaagcctccttggattctgttttttcagataaacttcattctaaatatgaattacagcag
attaaacatgaacctattgcatctgtaagaatcaaggaagaacctgtgaatgttaatatt
cctgaaaagactacagcactgaataatatggatggcaagaatgttaaagcaaaattggat
catgttcaatttgcagaatttaagattgacatggattctaaatttgaaaatagcaacaaa
gatttaaaggaagaattgtgccctggaaatctaagtctagttgatacaaggcaacacagt
tcagcacattcaaatcaagataaaaaagacgatgacattttgtgctaa

>gi568815591f:77596470_77879165|GENSCAN_predicted_peptide_3|174_aa
MRNQFQGAFSSSFNTNMIKKSSVKSQPPPSGAALAPTVRAASPPRSGGQCGGRRVLTEFR
GWIGTREESGRRDGGGGSGANASPSVAGDFPGSLPYLRAGVSRDPFSSVGRWRRLSRLPP
ELARSSSLDGDGPKPSAPPAPRAPLPGPCPLLPSLGAVLRGRRVLEGRSGVSGG

>gi568815591f:77596470_77879165|GENSCAN_predicted_CDS_3|525_bp
atgaggaaccagttccaaggtgctttctcatccagtttcaacaccaacatgatcaagaag
agtagtgtgaaaagccagccgcctcctagcggcgcggcgctcgctcctacggtaagagcg
gcatcacctccgcgctcgggtgggcagtgtggaggtcgtcgagttctgacagaatttcga
ggatggatcgggacgagggaggagagcggtcgtcgggatggaggtgggggctccggggcc
aacgcgtcgccctccgtcgccggcgactttcccggcagtctcccgtacctgagggccggg
gtcagccgcgaccccttctcatcagtcggccggtggcggaggctcagccgccttcctccc
gagctcgcgcggtcctcaagtcttgatggtgacgggccgaagcccagcgcgccacccgcc
cctcgggccccgcttccaggcccctgtcctttgcttccttcccttggcgctgtgctgagg
ggtcgtcgggtcctggaagggcgttcaggggtctcgggtggctag

>gi568815591f:77596470_77879165|GENSCAN_predicted_peptide_4|182_aa
MTSPNELNKAPVTNSRVTKVYEKVLHIMDHQRNANQNYSEISSYLSQNGFSPEDRQQQMP
ARMWRNGNPCTSLTGMQISTATMENTIIGIHAPFYASHWQGKQNAMIGLDLSGFTPSETS
DTHSLAVRPVERNEFLNKIEALPPGKKHGQSRYSWLIHKQLVDPLLPSSGVFCGWEVMLK
LF

>gi568815591f:77596470_77879165|GENSCAN_predicted_CDS_4|549_bp
atgacctcaccaaatgaactaaataaggcaccagtgaccaattcccgagtaacaaaggta
tatgaaaaggtgcttcacatcatggatcatcagagaaatgcaaatcaaaactacagtgag
atatcatcttacctcagtcaaaatggcttttctccagaagacaggcaacaacaaatgccg
gcaaggatgtggagaaatgggaatccctgtacatcgttgacaggaatgcaaattagtaca
gccactatggagaacaccataattggaatacatgccccattctatgccagtcactggcaa
gggaaacagaatgccatgattgggttagacttatcaggattcaccccctctgagacttcg
gatacacattctttggctgtaagacctgtggagaggaatgaattccttaacaaaatagag
gctcttccaccaggaaaaaagcacggacaaagtcgatacagctggcttattcacaaacag
cttgtggatccattacttcccagttcgggggtcttctgtggttgggaagtaatgctcaaa
ctcttttga

>gi568815591f:77596470_77879165|GENSCAN_predicted_peptide_5|495_aa
MWRTKEHNEVGWLLLSSVDKVMKENYELRDSISWLQKQILSLKSAKIALEGTASSSPVVA
TSPPRPMLPSAFPPLSEEINLVLPEATVMASPEAAVRQDNTDSPQKSAEQAWEWMLRVWD
NGGRNTELDQAEFMDLGPLSMSGLTVGSAVTQLQNLNYNGNNWILRWQGPSGSNQPSKAS
HPIIVQWAHEQSGHGGRDGGYAWAQQHGLPLTKADLAAAIAECPICQQQRPTLSPPYGTI
PRGDQPVTWWQIDYIEPFPSRKGQSIAFDQGTHFTATEVWQWAHAYGIHWSYHAPHHSEA
AGLTQQWNTLSKSQLQRQLGDNTLQGWGKVYALNQHPIYGTVSPIARIHRFRNQGVELEV
APLTITPSDTLVKFLLPVPETLRSPGLEVLVPEGGTLPRGDTTPLNWKLRLPPGHFGLPL
PLSQQAKKGVTVIGLDYQDEISLLLHNGGKEEYSWNTQDPLRRLLISPCRVIKVNGKLQQ
PNSGRTTNDPETIQE

>gi568815591f:77596470_77879165|GENSCAN_predicted_CDS_5|1488_bp
atgtggagaaccaaggaacataatgaagttggttggttgctcctaagttcagtggacaaa
gtgatgaaagaaaattatgaactcagggattctatctcctggcttcagaagcagatactg
agcctcaaatctgctaagattgccctggaaggaacagcttcctcatccccagtagtggca
acatcccctccccgacccatgctgccatcagcctttccacctttgtctgaagagataaac
cttgtgctgcctgaggcaacagtgatggcctcccctgaggcagctgtgaggcaagataac
actgattctcctcagaaatctgcagaacaggcatgggaatggatgttaagggtgtgggat
aacggcggaaggaacacagagttggatcaagctgaatttatggatttgggcccactaagt
atgtcaggtctaacagtgggaagtgcagtcactcaactacaaaatttaaattacaatggg
aataactggatcctgaggtggcaggggccaagtggcagcaatcaaccatcaaaggcaagc
caccccatcatcgtccaatgggcccatgaacaaagtggccatggtggcagggatggaggt
tacgcatgggctcagcaacatggacttccactcaccaaggctgatctggctgcagccatt
gctgagtgcccaatttgccagcagcagagaccaacactgagccctccatatggcaccatt
cctcggggtgatcagccagttacctggtggcagattgattatattgaaccttttccatca
cggaaagggcagagcattgcctttgaccaaggcactcactttacagctacagaagtgtgg
cagtgggctcatgcttatggaattcactggtcttaccatgctccccatcattctgaagca
gctggattgacacaacagtggaataccctttcgaagtcacaattacaacggcaactaggt
gacaatactttgcagggctggggcaaagtgtatgctctgaatcagcatccaatatatggt
actgtttctccaatagccaggattcacaggttcaggaatcaaggggtagaattggaagta
gcaccacttaccatcacccctagtgatacactagtaaaatttttgcttcctgttcctgag
acattacgttctcctggcctggaggtcttagttccagagggaggaacactgccaagagga
gacacaactccattaaactggaagttaagattgccacctggacactttgggctcccccta
cctttaagtcaacaggctaagaagggagttacagtgattggcctggactatcaagatgaa
atcagtctactactccacaacggaggtaaggaagagtattcatggaatacacaagatcca
ttaaggcgtctcttaatatcaccatgccgtgtgattaaggtcaatgggaaactacaacag
cccaattcaggcaggactacaaatgaccccgagaccattcaggaatga