GENSCAN 1.0	Date run:  8-Nov-116	Time: 02:13:18

Sequence gi568815593f:23409034_23627770 : 218737 bp : 35.61% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   2370   2267  104  0  2   90  101   110 0.161  12.30
 1.00 Prom -   9320   9281   40                              -3.15

 2.00 Prom +  12144  12183   40                              -5.35
 2.01 Sngl +  15216  15539  324  2  0   98   46   244 0.728  16.95
 2.02 PlyA +  17469  17474    6                               1.05

 3.00 Prom +  24186  24225   40                              -5.95
 3.01 Init +  29054  29192  139  1  1   84   22   137 0.414   7.05
 3.02 Intr +  53639  53774  136  0  1   88  115    63 0.524   7.71
 3.03 Intr +  67500  67617  118  0  1   74   55    69 0.348   1.75
 3.04 Intr +  83612  83759  148  1  1   51   70    69 0.095   0.29
 3.05 Intr +  97417  97596  180  2  0   80   22    99 0.014   1.42
 3.06 Intr +  98136  98294  159  1  0   44   29   137 0.050   2.44
 3.07 Intr +  99966 100069  104  1  2   17   81    92 0.059   0.37
 3.08 Intr + 100437 100560  124  2  1   94   60   122 0.992   9.24
 3.09 Intr + 100887 100994  108  1  0   77  116   148 0.922  15.84
 3.10 Intr + 108848 108897   50  0  2   43  115    57 0.665   1.38
 3.11 Intr + 111990 112146  157  2  1   28   86   103 0.677   2.76
 3.12 Intr + 113271 113372  102  1  0   77   84    88 0.936   6.53
 3.13 Intr + 113581 113852  272  2  2  102   99   240 0.999  22.84
 3.14 Intr + 114258 114325   68  2  2   47   94    56 0.716  -1.12
 3.15 Intr + 115301 115494  194  2  2   87   80   247 0.999  22.01
 3.16 Intr + 117200 118736 1537  0  1   79   80   758 0.627  61.68
 3.17 Intr + 121087 121261  175  1  1   81   36   107 0.196   3.82
 3.18 Term + 140864 140905   42  1  0  120   43    46 0.144  -0.52
 3.19 PlyA + 141305 141310    6                               1.05

 4.00 Prom + 174064 174103   40                              -1.95
 4.01 Init + 191529 191612   84  2  0   91   95    93 0.995  11.17
 4.02 Term + 194155 194367  213  0  0   64   42   154 0.982   4.65
 4.03 PlyA + 194517 194522    6                               1.05

 5.03 PlyA - 194850 194845    6                               1.05
 5.02 Term - 196781 196746   36  2  0  128   41    29 0.030  -1.44
 5.01 Init - 205541 205530   12  2  0  121   99     8 0.267   4.99

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100069   69  1  0   92   81    81 0.935   8.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:23409034_23627770|GENSCAN_predicted_peptide_1|35_aa
MGASLDQKLRGHPAGSGGVEVSDGSATTAISSGGR

>gi568815593f:23409034_23627770|GENSCAN_predicted_CDS_1|105_bp
atgggcgcctccctggatcagaagctcaggggacaccctgctggatccggaggggtggaa
gtcagtgatgggtctgcgacgacggcgatcagcagtggtggacgn

>gi568815593f:23409034_23627770|GENSCAN_predicted_peptide_2|107_aa
MGYSHYEDDLPNSGVDTSIGNEPLDSDSTDIHFSKVGRLLRTVEYAEFKSFSTRVARSLG
PVVLMQEKAIGPEASLEPEPSPFKKGCPSIPDGAWYTDGSSQGPTAA

>gi568815593f:23409034_23627770|GENSCAN_predicted_CDS_2|324_bp
atgggctacagtcattatgaggatgacttacccaatagtggggtggatacatccataggt
aatgaacccctggattcggacagcacagacatccactttagcaaagtggggcgattactg
agaacagtggagtatgctgagttcaagtcctttagcaccagagttgcaagaagtttggga
cctgtagtcctaatgcaagagaaggccattgggcctgaggcatccttagagcctgagcca
tcgccatttaagaaagggtgtccctccattcctgatggggcatggtacacagatgggtcc
agccaaggtcctactgctgcctga

>gi568815593f:23409034_23627770|GENSCAN_predicted_peptide_3|1270_aa
MQPEATRFLTSSTAPVDTITIVKPKIVVRDIHQALHSDGPAGTTQIEIWTVSRGLTRTLK
YPGHIKNVKLFIPPLGLQRQEANILLLDREVSGYTKFTFPPTVYKGSLFSTFSSTLNIEQ
QKKKGKCEGNLQTLLHQTLWAPQRVGSYPYHLDKQFFVAAQVSVGIVESPDARILEGCDK
RPMPSHSARAGAHTVQPLQPSLSASLHLSTLPVTQEYIGFPSTARAQPQAILLGVPRAVA
LKGTPTLPDENQCKNSGNSKRHSVPLEDPGLRRDVRSSPDARLSRKHRSWGKPKLEQGLL
DSPSTMSPEKSQEESPEEDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVK
RNYNALITIGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMALRVEQRKH
QKGMPKASFSNESSLKELSRTANLLNASGSEQAQKPVSPSGEASTSGQHSRLKLELRKKE
TERKMYSLRERKGHAYKEVSEPQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHP
NRSALSLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANNGYSWLI
TKGRNCYEYVDGKDKSWANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLV
WYGDEYGQELGIKWGSKWKKELMAGREPKPEIHPCPSCCLAFSSQKFLSQHVERNHSSQN
FPGPSARKLLQPENPCPGDQNQEQQYPDPHSRNDKTKGQEIKERSKLLNKRTWQREISRA
FSSPPKGQMGSCRVGKRIMEEESRTGQKVNPGNTGKLFVGVGISRIAKVKYGECGQGFSV
KSDVITHQRTHTGEKLYVCRECGRGFSWKSHLLIHQRIHTGEKPYVCRECGRGFSWQSVL
LTHQRTHTGEKPYVCRECGRGFSRQSVLLTHQRRHTGEKPYVCRECGRGFSRQSVLLTHQ
RRHTGEKPYVCRECGRGFSWQSVLLTHQRTHTGEKPYVCRECGRGFSWQSVLLTHQRTHT
GEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLRHQRTHTGEKP
YVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCR
ECGRGFRNKSHLLRHQRTHTGEKPYVCRECGRGFSDRSSLCYHQRTHTGEKPYVCREDDD
LSHDYVPGPNRGSGCLFSRPNNEMQTNGERMGKSLKAFPLRNEARLGYLISQQLFSTTQA
VESGSPLPHG

>gi568815593f:23409034_23627770|GENSCAN_predicted_CDS_3|3813_bp
atgcagccagaggccacaagattcctaacctcctcaactgctcctgtggataccatcact
attgtaaaacctaagattgttgttagagacattcatcaggccctgcattctgatggacca
gctggcaccacccagatcgagatctggacagtatcaagaggactcacaagaacgttgaaa
tatccagggcatataaaaaatgtgaagctttttataccacccttaggcctgcagaggcag
gaagcaaacatcttgttactagatcgtgaagtaagtggctataccaagtttacattccca
cctacagtgtacaagggatcccttttctccacattttcatcaacattaaatattgagcag
cagaaaaaaaagggaaaatgtgaaggcaacttacagacactcctgcaccaaacactctgg
gctccacaaagggtggggtcctacccctaccacctagacaaacagttctttgtagcagct
caggtgtctgttgggattgtagagtcccctgatgccaggatcctggaaggctgtgacaag
aggcccatgcctagccactctgcaagagcaggtgcacacacagtgcagcctctgcagccc
agcctgagtgcatcgctccacctgagtaccttacccgtgacccaggagtacattggattc
cccagcacagcgagagcccaacctcaagccatacttcttggtgtccccagggctgtggca
cttaaaggaacaccaaccctcccagatgagaatcagtgcaagaactctggcaattcaaaa
agacacagtgtccccttggaagacccaggcctgcggagggacgtgaggagcagccccgac
gcccgactcagtcgcaaacaccggagttggggaaaaccaaaattggagcagggccttcta
gacagtcccagcaccatgagccctgaaaagtcccaagaggagagcccagaagaagacaca
gagagaacagagcggaagcccatggtcaaagatgccttcaaagacatttccatatacttc
accaaggaagaatgggcagagatgggagactgggagaaaactcgctataggaatgtgaaa
aggaactataatgcactgattactataggtctcagagccactcgaccagctttcatgtgt
caccgaaggcaggccatcaaactccaggtggatgacacagaagattctgatgaagaatgg
acccctaggcagcaagtcaaacctccttggatggccttaagagtggaacagcgtaaacac
cagaagggaatgcccaaggcgtcattcagtaatgaatctagtttgaaagaattgtcaaga
acagcaaatttactgaatgcaagtggctcagagcaggctcagaaaccagtgtccccttct
ggagaagcaagtacctctggacagcactcaagactaaaactggaactcaggaagaaggag
actgaaagaaagatgtatagcctgcgagaaagaaagggtcatgcatacaaagaggtcagc
gagccgcaggatgatgattacctctattgtgagatgtgtcagaacttcttcattgacagc
tgtgctgcccatgggccccctacatttgtaaaggacagtgcagtggacaaggggcacccc
aaccgttcagccctcagtctgcccccagggctgagaattgggccatcaggcatccctcag
gctgggcttggagtatggaatgaggcatctgatctgccgctgggtctgcactttggccct
tatgagggccgaattacagaagacgaagaggcagccaacaatggatactcctggctgatc
accaaggggagaaactgctatgagtatgtggatggaaaagataaatcctgggccaactgg
atgaggtatgtgaactgtgcccgggatgatgaagagcagaacctggtggccttccagtac
cacaggcagatcttctatagaacctgccgagtcattaggccaggctgtgaactgctggtc
tggtatggggatgaatacggccaggaactgggcatcaagtggggcagcaagtggaagaaa
gagctcatggcagggagagaaccaaagccagagatccatccatgtccctcatgctgtctg
gccttttcaagtcagaaatttctcagtcaacatgtagaacgcaatcactcctctcagaac
ttcccaggaccatctgcaagaaaactcctccaaccagagaatccctgcccaggggatcag
aatcaggagcagcaatatccagatccacacagccgtaatgacaaaaccaaaggtcaagag
atcaaagaaaggtccaaactcttgaataaaaggacatggcagagggagatttcaagggcc
ttttctagcccacccaaaggacaaatggggagctgtagagtgggaaaaagaataatggaa
gaagagtccagaacaggccagaaagtgaatccagggaacacaggcaaattatttgtgggg
gtaggaatctcaagaattgcaaaagtcaagtatggagagtgtggacaaggtttcagtgtt
aaatcagatgttattacacaccaaaggacacatacaggggagaagctctacgtctgcagg
gagtgtgggcggggctttagctggaagtcacacctcctcattcaccagaggatacacaca
ggggagaagccctatgtctgcagggagtgtgggcggggctttagctggcagtcagtcctc
ctcactcaccagaggacacacacaggggagaagccctatgtctgcagggagtgtgggcgg
ggctttagccggcagtcagtcctcctcactcaccagaggagacacacaggggagaagccc
tatgtctgcagggagtgtgggcggggctttagccggcagtcagtcctcctcactcaccag
aggagacacacaggggagaagccctatgtctgcagggagtgtgggcggggctttagctgg
cagtcagtcctcctcactcaccagaggacacacacaggggagaagccctatgtctgcagg
gagtgtgggcggggctttagctggcagtcagtcctcctcactcaccagaggacacacaca
ggggagaagccctatgtctgcagggagtgtgggcggggctttagcaataagtcacacctc
ctcagacaccagaggacacacacaggggagaagccctatgtctgcagggagtgtgggcgg
ggctttcgcgataagtcacacctcctcagacaccagaggacacacacaggggagaagccc
tatgtctgcagggagtgtgggcggggctttagagataagtcaaacctcctcagtcaccag
aggacacacacaggggagaagccctatgtctgcagggagtgtgggcggggctttagcaat
aagtcacacctcctcagacaccagaggacacacacaggggagaagccctatgtctgcagg
gagtgtgggcggggctttcgcaataagtcacacctcctcagacaccagaggacacacaca
ggggagaagccctacgtctgcagggagtgtgggcggggctttagcgataggtcaagcctc
tgctatcaccagaggacacacacaggggagaagccctacgtctgcagggaggatgatgat
ctaagccatgactatgttcccggaccaaaccgagggtcgggctgcttgttctcacggccc
aataacgagatgcagacgaacggagagagaatggggaaaagcttaaaagcctttcctctg
agaaatgaagcaagattaggatacctaatatcacaacagttattcagcacgacccaagct
gtagaatctggaagccctcttcctcatggttga

>gi568815593f:23409034_23627770|GENSCAN_predicted_peptide_4|98_aa
MAITKSQTVTDIGEDKRKTEYLHTVGGPPLTICDLASHDKHLVTCEWASPSPPVLPSACG
AQKPHTAESSGKELAGGLGHAICTGLRISPFTTSYLWL

>gi568815593f:23409034_23627770|GENSCAN_predicted_CDS_4|297_bp
atggctatcacaaaaagtcaaacagtaaccgatatcggcgaagataaaaggaaaactgaa
tacttacacactgttggtgggcctcctttgacgatctgcgaccttgcgtcacatgataaa
cacctggtcacctgtgaatgggcttctccaagccctcctgtcctgccttctgcctgtggt
gcgcagaagccacacaccgctgaaagctctgggaaagaactggctggtggacttggacat
gctatatgtaccggtctcagaatctcacccttcacaacaagctatttgtggctttaa

>gi568815593f:23409034_23627770|GENSCAN_predicted_peptide_5|15_aa
MAILVFITPNSRLHQ

>gi568815593f:23409034_23627770|GENSCAN_predicted_CDS_5|48_bp
atggctattctcgtattcattactccaaattcaagacttcatcagtaa