GENSCAN 1.0	Date run:  8-Nov-116	Time: 02:08:54

Sequence gi568815579f:5355492_5556778 : 201287 bp : 50.57% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1548   1661  114  2  0   59   37    99 0.195   2.54
 1.02 Intr +   9055   9157  103  0  1   22   93    65 0.053   0.15
 1.03 Term +  20093  20334  242  0  2   21   42   335 0.454  18.39
 1.04 PlyA +  21086  21091    6                               1.05

 2.04 PlyA -  22620  22615    6                               1.05
 2.03 Term -  34349  34189  161  0  2  106   37    36 0.026  -1.60
 2.02 Intr -  41597  41454  144  0  0   93   80    36 0.196   3.55
 2.01 Init -  46004  45974   31  2  1  110   67    60 0.353   4.77
 2.00 Prom -  55159  55120   40                              -3.26

 3.00 Prom +  64541  64580   40                              -1.96
 3.01 Init +  64706  64721   16  1  1   71   69    16 0.070  -1.37
 3.02 Intr +  80525  80806  282  0  0  107   85   118 0.545  10.79
 3.03 Intr +  81216  81319  104  1  2  150   80     1 0.891   5.39
 3.04 Term +  85419  85541  123  2  0    3   33   130 0.018  -2.62
 3.05 PlyA +  89823  89828    6                               1.05

 4.00 Prom +  91913  91952   40                              -3.26
 4.01 Sngl + 100211 101290 1080  1  0  102   43  1861 0.993 178.10
 4.02 PlyA + 101343 101348    6                               1.05

 5.09 PlyA - 101640 101635    6                               1.05
 5.08 Term - 108010 107876  135  1  0   25   38   261 0.643  12.82
 5.07 Intr - 114171 114081   91  2  1   89   99    33 0.506   4.50
 5.06 Intr - 124721 124666   56  2  2   77   75    26 0.256  -2.02
 5.05 Intr - 125165 125021  145  1  1  109   94    65 0.814   9.48
 5.04 Intr - 145314 145193  122  0  2   74   94    38 0.002   2.29
 5.03 Intr - 157533 157447   87  0  0   94   78    18 0.194   1.57
 5.02 Intr - 161205 161022  184  2  1   50   92   101 0.234   6.49
 5.01 Init - 170309 170287   23  2  2   77  113    25 0.232   3.08
 5.00 Prom - 176546 176507   40                              -3.66

 6.00 Prom + 176746 176785   40                              -4.26
 6.01 Init + 181268 181386  119  1  2   84   88    89 0.638   6.17
 6.02 Term + 184883 184982  100  2  1   81   47    96 0.813   2.40
 6.03 PlyA + 187412 187417    6                               1.05

 7.04 PlyA - 192151 192146    6                               1.05
 7.03 Term - 192564 192460  105  0  0  109   43    48 0.333   0.81
 7.02 Intr - 192715 192634   82  0  1   69   52    31 0.187  -2.76
 7.01 Init - 195494 195367  128  2  2   72  109    70 0.880   7.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  88089  88036   54  0  0  142   47    11 0.842  -0.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815579f:5355492_5556778|GENSCAN_predicted_peptide_1|152_aa
LWAPGPQEWLGQDGYKENLIAPELKPNVFEESCQDSVKKCLKLKFLNAERRVYGECLAPG
AQPMFGICSLWAEEQEEEEEKEEREGEGEGEGEGEGEEEEEEGEGEGEGKGEGEEEEGEG
EEEGEGGGGAEKKERKKKKKKEEEEEEEEEEG

>gi568815579f:5355492_5556778|GENSCAN_predicted_CDS_1|459_bp
ctgtgggcgccaggccctcaagagtggctggggcaggacggctacaaagagaatttgatt
gctccggagttgaagcccaacgtgttcgaggagtcatgccaagattcagtgaagaaatgt
ctaaaactcaagtttttgaatgcggaacgaagggtgtatggagagtgtttagctcctggt
gcccagcccatgtttggcatctgcagcctctgggctgaagaacaagaggaagaggaagaa
aaagaagaaagagaaggagaaggagagggagagggagagggagaaggagaggaagaggaa
gaagaaggagaaggagagggagagggaaaaggagaaggagaggaagaggaaggagaagga
gaagaagaaggagagggaggaggaggagcagagaagaaggagaggaagaagaagaagaag
aaggaggaggaggaggaggaggaagaagaagaaggctga

>gi568815579f:5355492_5556778|GENSCAN_predicted_peptide_2|111_aa
MPGRLLLLEGYTSQGSRFSHCGDVETAGNLMSQAWVQILTLLSDLGDASVKGDEADATDI
SSQIFSPPSKVFSGTFMGNLPQNLLEPLEFLNSQSSYGSPDSCLAGDFRDV

>gi568815579f:5355492_5556778|GENSCAN_predicted_CDS_2|336_bp
atgcctggccggctgctgcttcttgagggatacacttctcaagggagtagattcagccac
tgtggtgatgtggaaacagcagggaacttgatgtcacaggcctgggttcaaatcctcaca
ttgctgagtgaccttggggatgcgtctgtaaaaggggatgaggcagatgccacagatata
tcatcacagatcttctcccctccgagcaaggttttctctggtactttcatgggcaattta
ccacagaacctattggaaccccttgagtttcttaattcacagagcagctatgggagtccg
gattcctgcctagctggagatttcagagatgtgtag

>gi568815579f:5355492_5556778|GENSCAN_predicted_peptide_3|174_aa
MVVCAYLTVEPGPNSVVPYPQHPVWASDCACSSIEWIFTAVLGCGGFYLPHFTQGKLRLK
DMEPSPPPLVGASRMSVDHARSLEFCGRNAAVSGSSTNGGSSGAGPCNPSRVPGARALLP
PTGRPQPMAAPLDEKRGEKRIEEKRIEETKIEEMRIKRRERERREEEKMQSDAI

>gi568815579f:5355492_5556778|GENSCAN_predicted_CDS_3|525_bp
atggtggtgtgcgcctacctcaccgtggagcctgggcccaactcggtggtgccgtatccc
cagcaccccgtatgggcaagtgattgtgcttgttcctcgattgaatggatcttcacagca
gtcctgggatgtggaggcttttatctaccccatttcacacagggaaaactgaggctcaaa
gacatggagccctcccccccaccacttgtgggtgcttcgaggatgtccgtggaccatgcg
cgctccctggaattctgtgggaggaatgctgcggtctcgggcagctccacaaacggagga
tcctccggggctggaccctgcaacccctcccgggtcccgggagctcgcgccctgctcccg
cccactggacgcccgcagccaatggccgcgccgcttgatgagaaaagaggagagaagaga
attgaagaaaagagaattgaagagacaaaaattgaagagatgagaattaagagaagagaa
agagagagaagagaagaagagaagatgcagtcagatgctatttag

>gi568815579f:5355492_5556778|GENSCAN_predicted_peptide_4|359_aa
MGWPRPGRALVAVKALLVLSLLQVPAQAVVRAVLEDNSSSVDFADLPALFGVPLAPEGIR
GYLMEVKPANACHPIEAPRLGNRSLGAIVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHS
DDLVSMTHVYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALLLPDDPPCHDLGCHP
VLTVSWVLGCTLALVVSAFFVLNHLWLWAQACCSHRRPVKTSTCQKAQVRTFTWHNDLCA
ICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAATEDSFDSTTYSFR
DEDPSLPGHRPPIWAIQVQLRSRRLELLGRASPHCHCSTTSLEAEYTTVSSAPPEAPGQ

>gi568815579f:5355492_5556778|GENSCAN_predicted_CDS_4|1080_bp
atggggtggccacggccgggccgagccctcgtggcagtcaaagccttgctggtcttgtcg
ctgctccaggtgcccgcgcaggcagtggtacgggccgtgctggaagacaactcgagctcg
gtggactttgcggatctgccggcgctgttcggcgtccccctggcccccgagggcatacgg
ggctacctgatggaggtcaagccagccaacgcgtgccatcccatcgaggccccgcgactg
ggcaaccgctctctgggcgccatcgtgctgatccgccgctacgactgcaccttcgacctc
aaggtgctgaacgcccagcgcgccggcttcgaggcggccatcgtgcacaacgtccactcc
gacgacctcgtgagcatgacccacgtctacgaggacttgaggggccagatcgccatcccc
tcagtgttcgtgagcgaggccgcctcgcaggacctgcgggtcatcctgggctgcaacaag
tcggcccacgcgctgctcctgcccgacgacccaccgtgccacgacctgggctgtcacccc
gtgctgaccgtgtcctgggtgctgggctgtaccctggccctggtcgtatcagccttcttt
gtcctgaaccacctgtggctctgggcccaggcctgctgcagccacagacggccggtgaag
acgtctacctgccagaaggcccaggtccgcaccttcacgtggcacaacgacctgtgtgcc
atctgcctggatgagtatgaggagggcgaccaactcaagatcctgccctgctcccacacc
taccactgcaaatgcattgacccctggttctcccaagccccccggcgctcctgccccgtg
tgcaaacagtcggtggccgccacagaagacagctttgactccaccacctacagcttcagg
gacgaggacccctccctaccgggccaccggccccccatctgggccattcaagtccagcta
cgctcccggaggctggagctgctgggccgcgccagtccccactgccactgcagcaccacg
tccctggaggcagagtataccactgtctcctcagcccctcctgaggcccctggtcagtaa

>gi568815579f:5355492_5556778|GENSCAN_predicted_peptide_5|280_aa
MDGQMDESLGNKLRGCRRRRRRRRRRRRREEEEEEEERRGRRTKSSREQGHLNLEADLSL
VTLRCRWPQDALQCRSVFLHQEAGERPGVGGIKDAEAEVGKLTPGKGQRIPGLGSSQLPD
PLFRNCTAVLPVGMEQPVRVKAQVLPEAYQALHDLPQPLPALSSSLSPPHSLCSSHMGLL
VVPPTPQLALPLPAAVQKFVWRTDASQPPCEGAAVDTNSFLLLGQRLPPSPDPLRQSKTL
SKEEEEEEEEEEEEEEEEEEEEEEEEEERRRRKRRKEVYV

>gi568815579f:5355492_5556778|GENSCAN_predicted_CDS_5|843_bp
atggatgggcagatggatgaaagcctgggtaacaaactaagaggctgtcgaagaagaagg
agaagaagaagaagaaggagaagaagagaagaggaagaggaagaagaagagagaagagga
agaagaacaaagagcagccgcgagcaaggccacttgaacttggaagcagatctttctctg
gtgaccttgagatgtcggtggccccaggacgctctgcagtgtcgctcagtctttttgcac
caggaagctggagagcgacccggagtgggagggataaaggacgccgaggcggaggtgggg
aaacttacccctggaaaagggcagagaattcctggcttgggtagtagccagcttcctgac
ccccttttcaggaactgcactgctgtgctacctgtgggcatggaacagccagtcagggtc
aaagcccaagtcctccccgaggcctaccaggccctgcacgacctgccccagcccctccct
gccctctcctcctccttgtctccccctcactcactctgctccagccacatgggcctcctc
gttgttcctccaacaccccagctcgctctgcccctccctgcagcagttcagaaattcgtc
tggcgcacagatgccagccagcccccttgcgaaggtgcagccgtggacaccaactccttc
cttctgctggggcaaaggctccccccttccccagaccccctcaggcagagcaagactctg
tctaaagaagaggaagaagaagaggaagaagaagaagaggaagaggaagaagaagaagaa
gaagaagaagaagaagaagaagaaagaaggagaaggaaaagaagaaaggaagtctatgtc
taa

>gi568815579f:5355492_5556778|GENSCAN_predicted_peptide_6|72_aa
MMRAAPRQEGALPAFPALSLHGCAIPGHLCPSLGLRGQESAIGHSGTVAVVPAFRPPPAT
VMLMGTHQSSLQ

>gi568815579f:5355492_5556778|GENSCAN_predicted_CDS_6|219_bp
atgatgcgtgctgccccccgccaggaaggagccctgcctgccttcccagcactgtcactg
cacggctgtgcgatcccgggacatctctgcccctctctgggccttagagggcaagagagc
gctatcgggcactcgggcaccgtagctgtggttccagcattccggccgccaccagccact
gtcatgctgatgggaacccatcagtccagtctgcagtga

>gi568815579f:5355492_5556778|GENSCAN_predicted_peptide_7|104_aa
MVYGASEAIGQRQSSAAKPRRSGKESVREPWARVPGALGVAARIKWCEDQRQTPYLQADL
SPLDAERCQMIPDCLILPHGHSTLWWSVQRLQHFRNANAINVGN

>gi568815579f:5355492_5556778|GENSCAN_predicted_CDS_7|315_bp
atggtctacggggcttccgaggcgatcgggcagcgtcagtcttcagccgctaagccgaga
agatctgggaaggagtcagtcagagagccttgggccagagttccaggggctctgggagtg
gctgccaggataaaatggtgtgaggatcagcggcagactccctatctccaggcagatctg
tctcccttagatgctgaaagatgccagatgattccggattgcttgatcctgccacatggg
cacagcactctctggtggtcggtgcaaaggctgcagcattttagaaatgcaaatgccatc
aacgtgggcaattaa