Result of FASTA (omim) for pF1KE9251
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE9251, 561 aa
  1>>>pF1KE9251     561 - 561 aa - 561 aa
Library: /omim/omim.rfq.tfa
  64236559 residues in 92054 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.1329+/-0.000338; mu= 2.4217+/- 0.021
 mean_var=216.8521+/-43.327, 0's: 0 Z-trim(122.0): 11  B-trim: 0 in 0/53
 Lambda= 0.087095
 statistics sampled from 40936 (40947) to 40936 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.445), width:  16
 Scan time:  5.950

The best scores are:                                      opt bits E(92054)
NP_079358 (OMIM: 611510) centromere protein T [Hom ( 561) 3711 479.0 1.9e-134
XP_024306224 (OMIM: 611510) centromere protein T i ( 458) 3051 396.0 1.5e-109
XP_024306223 (OMIM: 611510) centromere protein T i ( 458) 3051 396.0 1.5e-109
XP_024306225 (OMIM: 611510) centromere protein T i ( 458) 3051 396.0 1.5e-109
XP_011521647 (OMIM: 611510) centromere protein T i ( 314) 2096 275.9 1.4e-73
XP_016879206 (OMIM: 611510) centromere protein T i ( 314) 2096 275.9 1.4e-73
XP_024306226 (OMIM: 611510) centromere protein T i ( 319) 1815 240.6 6.2e-63
XP_016879204 (OMIM: 611510) centromere protein T i ( 319) 1815 240.6 6.2e-63


>>NP_079358 (OMIM: 611510) centromere protein T [Homo sa  (561 aa)
 initn: 3711 init1: 3711 opt: 3711  Z-score: 2535.5  bits: 479.0 E(92054): 1.9e-134
Smith-Waterman score: 3711; 100.0% identity (100.0% similar) in 561 aa overlap (1-561:1-561)

               10        20        30        40        50        60
pF1KE9 MADHNPDSDSTPRTLLRRVLDTADPRTPRRPRSARAGARRALLETASPRKLSGQTRTIAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 MADHNPDSDSTPRTLLRRVLDTADPRTPRRPRSARAGARRALLETASPRKLSGQTRTIAR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 GRSHGARSVGRSAHIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 GRSHGARSVGRSAHIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 SRQESSCGSLELQLPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 SRQESSCGSLELQLPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 DASSLTRSLNLTFATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 DASSLTRSLNLTFATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLED
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 TQPFSQPMVGSPNVYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 TQPFSQPMVGSPNVYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE9 EEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 EEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE9 AEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 AEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPA
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE9 PAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 PAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKAL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE9 EMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 EMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLP
              490       500       510       520       530       540

              550       560 
pF1KE9 LEYRQLLIPCAYSGNSVFPAQ
       :::::::::::::::::::::
NP_079 LEYRQLLIPCAYSGNSVFPAQ
              550       560 

>>XP_024306224 (OMIM: 611510) centromere protein T isofo  (458 aa)
 initn: 3051 init1: 3051 opt: 3051  Z-score: 2088.5  bits: 396.0 E(92054): 1.5e-109
Smith-Waterman score: 3051; 100.0% identity (100.0% similar) in 458 aa overlap (104-561:1-458)

            80        90       100       110       120       130   
pF1KE9 HIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQPSRQESSCGSLELQ
                                     ::::::::::::::::::::::::::::::
XP_024                               MPESVVKPVPAPQAVQPSRQESSCGSLELQ
                                             10        20        30

           140       150       160       170       180       190   
pF1KE9 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
               40        50        60        70        80        90

           200       210       220       230       240       250   
pF1KE9 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
              100       110       120       130       140       150

           260       270       280       290       300       310   
pF1KE9 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
              160       170       180       190       200       210

           320       330       340       350       360       370   
pF1KE9 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
              220       230       240       250       260       270

           380       390       400       410       420       430   
pF1KE9 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
              280       290       300       310       320       330

           440       450       460       470       480       490   
pF1KE9 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
              340       350       360       370       380       390

           500       510       520       530       540       550   
pF1KE9 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
              400       410       420       430       440       450

           560 
pF1KE9 GNSVFPAQ
       ::::::::
XP_024 GNSVFPAQ
               

>>XP_024306223 (OMIM: 611510) centromere protein T isofo  (458 aa)
 initn: 3051 init1: 3051 opt: 3051  Z-score: 2088.5  bits: 396.0 E(92054): 1.5e-109
Smith-Waterman score: 3051; 100.0% identity (100.0% similar) in 458 aa overlap (104-561:1-458)

            80        90       100       110       120       130   
pF1KE9 HIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQPSRQESSCGSLELQ
                                     ::::::::::::::::::::::::::::::
XP_024                               MPESVVKPVPAPQAVQPSRQESSCGSLELQ
                                             10        20        30

           140       150       160       170       180       190   
pF1KE9 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
               40        50        60        70        80        90

           200       210       220       230       240       250   
pF1KE9 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
              100       110       120       130       140       150

           260       270       280       290       300       310   
pF1KE9 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
              160       170       180       190       200       210

           320       330       340       350       360       370   
pF1KE9 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
              220       230       240       250       260       270

           380       390       400       410       420       430   
pF1KE9 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
              280       290       300       310       320       330

           440       450       460       470       480       490   
pF1KE9 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
              340       350       360       370       380       390

           500       510       520       530       540       550   
pF1KE9 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
              400       410       420       430       440       450

           560 
pF1KE9 GNSVFPAQ
       ::::::::
XP_024 GNSVFPAQ
               

>>XP_024306225 (OMIM: 611510) centromere protein T isofo  (458 aa)
 initn: 3051 init1: 3051 opt: 3051  Z-score: 2088.5  bits: 396.0 E(92054): 1.5e-109
Smith-Waterman score: 3051; 100.0% identity (100.0% similar) in 458 aa overlap (104-561:1-458)

            80        90       100       110       120       130   
pF1KE9 HIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQPSRQESSCGSLELQ
                                     ::::::::::::::::::::::::::::::
XP_024                               MPESVVKPVPAPQAVQPSRQESSCGSLELQ
                                             10        20        30

           140       150       160       170       180       190   
pF1KE9 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
               40        50        60        70        80        90

           200       210       220       230       240       250   
pF1KE9 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
              100       110       120       130       140       150

           260       270       280       290       300       310   
pF1KE9 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
              160       170       180       190       200       210

           320       330       340       350       360       370   
pF1KE9 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
              220       230       240       250       260       270

           380       390       400       410       420       430   
pF1KE9 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
              280       290       300       310       320       330

           440       450       460       470       480       490   
pF1KE9 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
              340       350       360       370       380       390

           500       510       520       530       540       550   
pF1KE9 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
              400       410       420       430       440       450

           560 
pF1KE9 GNSVFPAQ
       ::::::::
XP_024 GNSVFPAQ
               

>>XP_011521647 (OMIM: 611510) centromere protein T isofo  (314 aa)
 initn: 2096 init1: 2096 opt: 2096  Z-score: 1442.4  bits: 275.9 E(92054): 1.4e-73
Smith-Waterman score: 2096; 100.0% identity (100.0% similar) in 314 aa overlap (248-561:1-314)

       220       230       240       250       260       270       
pF1KE9 DVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPNVYHSLPCTPHTGAEDAEQAAGRKT
                                     ::::::::::::::::::::::::::::::
XP_011                               MVGSPNVYHSLPCTPHTGAEDAEQAAGRKT
                                             10        20        30

       280       290       300       310       320       330       
pF1KE9 QSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKM
               40        50        60        70        80        90

       340       350       360       370       380       390       
pF1KE9 EEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAAS
              100       110       120       130       140       150

       400       410       420       430       440       450       
pF1KE9 PESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHK
              160       170       180       190       200       210

       460       470       480       490       500       510       
pF1KE9 AGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLEL
              220       230       240       250       260       270

       520       530       540       550       560 
pF1KE9 LMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNSVFPAQ
       ::::::::::::::::::::::::::::::::::::::::::::
XP_011 LMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNSVFPAQ
              280       290       300       310    

>>XP_016879206 (OMIM: 611510) centromere protein T isofo  (314 aa)
 initn: 2096 init1: 2096 opt: 2096  Z-score: 1442.4  bits: 275.9 E(92054): 1.4e-73
Smith-Waterman score: 2096; 100.0% identity (100.0% similar) in 314 aa overlap (248-561:1-314)

       220       230       240       250       260       270       
pF1KE9 DVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPNVYHSLPCTPHTGAEDAEQAAGRKT
                                     ::::::::::::::::::::::::::::::
XP_016                               MVGSPNVYHSLPCTPHTGAEDAEQAAGRKT
                                             10        20        30

       280       290       300       310       320       330       
pF1KE9 QSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKM
               40        50        60        70        80        90

       340       350       360       370       380       390       
pF1KE9 EEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAAS
              100       110       120       130       140       150

       400       410       420       430       440       450       
pF1KE9 PESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHK
              160       170       180       190       200       210

       460       470       480       490       500       510       
pF1KE9 AGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLEL
              220       230       240       250       260       270

       520       530       540       550       560 
pF1KE9 LMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNSVFPAQ
       ::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNSVFPAQ
              280       290       300       310    

>>XP_024306226 (OMIM: 611510) centromere protein T isofo  (319 aa)
 initn: 1815 init1: 1815 opt: 1815  Z-score: 1251.4  bits: 240.6 E(92054): 6.2e-63
Smith-Waterman score: 1815; 99.3% identity (100.0% similar) in 275 aa overlap (287-561:45-319)

        260       270       280       290       300       310      
pF1KE9 SLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSG
                                     ..::::::::::::::::::::::::::::
XP_024 RTGSAGPSLPFSELCSLGLLRLRPVFSPLHSGPGKPAQFLAGEAEEVNAFALGFLSTSSG
           20        30        40        50        60        70    

        320       330       340       350       360       370      
pF1KE9 VSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGT
           80        90       100       110       120       130    

        380       390       400       410       420       430      
pF1KE9 AEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 AEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPL
          140       150       160       170       180       190    

        440       450       460       470       480       490      
pF1KE9 LVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCD
          200       210       220       230       240       250    

        500       510       520       530       540       550      
pF1KE9 DLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 DLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNS
          260       270       280       290       300       310    

        560 
pF1KE9 VFPAQ
       :::::
XP_024 VFPAQ
            

>>XP_016879204 (OMIM: 611510) centromere protein T isofo  (319 aa)
 initn: 1815 init1: 1815 opt: 1815  Z-score: 1251.4  bits: 240.6 E(92054): 6.2e-63
Smith-Waterman score: 1815; 99.3% identity (100.0% similar) in 275 aa overlap (287-561:45-319)

        260       270       280       290       300       310      
pF1KE9 SLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSG
                                     ..::::::::::::::::::::::::::::
XP_016 RTGSAGPSLPFSELCSLGLLRLRPVFSPLHSGPGKPAQFLAGEAEEVNAFALGFLSTSSG
           20        30        40        50        60        70    

        320       330       340       350       360       370      
pF1KE9 VSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGT
           80        90       100       110       120       130    

        380       390       400       410       420       430      
pF1KE9 AEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPL
          140       150       160       170       180       190    

        440       450       460       470       480       490      
pF1KE9 LVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCD
          200       210       220       230       240       250    

        500       510       520       530       540       550      
pF1KE9 DLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNS
          260       270       280       290       300       310    

        560 
pF1KE9 VFPAQ
       :::::
XP_016 VFPAQ
            




561 residues in 1 query   sequences
64236559 residues in 92054 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Aug  1 17:03:36 2019 done: Thu Aug  1 17:03:37 2019
 Total Scan time:  5.950 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
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