GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:49:17

Sequence gi568815587f:47465623_47671626 : 206004 bp : 45.72% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.16 PlyA -   2797   2792    6                               1.05
 1.15 Term -   6735   6608  128  1  2   43   53   217 0.959  12.14
 1.14 Intr -   7609   7466  144  2  0   42   76   168 0.943  11.25
 1.13 Intr -   9899   9714  186  0  0   61  113   188 0.964  18.26
 1.12 Intr -  11334  11224  111  1  0   63  110    41 0.588   4.15
 1.11 Intr -  11803  11675  129  2  0   72  115    52 0.990   6.97
 1.10 Intr -  13330  13255   76  1  1   58  107    36 0.681   1.59
 1.09 Intr -  17234  17073  162  2  0   91   73   111 0.962  10.07
 1.08 Intr -  17910  17831   80  1  2  111   75    70 0.999   7.27
 1.07 Intr -  18901  18767  135  2  0   53   92   158 0.685  13.24
 1.06 Intr -  21176  21128   49  2  1  112  103    45 0.983   6.65
 1.05 Intr -  21619  21537   83  2  2   72   78    39 0.953   0.66
 1.04 Intr -  23402  23215  188  1  2   34   72   228 0.035  15.13
 1.03 Intr -  84037  83979   59  1  2   94  103    17 0.076   1.48
 1.02 Intr -  87535  87370  166  0  1   79  105   123 0.187  13.06
 1.01 Init -  92196  92189    8  0  2   51   95     0 0.092  -2.57
 1.00 Prom -  92820  92781   40                              -5.56

 2.00 Prom +  98073  98112   40                              -5.16
 2.01 Init + 100001 100174  174  1  0  102   99   392 0.999  39.05
 2.02 Intr + 100284 100364   81  2  0   85   94   170 0.998  17.13
 2.03 Intr + 104078 104269  192  1  0   54   81   116 0.981   7.19
 2.04 Term + 105849 106007  159  2  0  103   41   173 0.999  12.04
 2.05 PlyA + 106337 106342    6                              -0.45

 3.04 PlyA - 106594 106589    6                               1.05
 3.03 Term - 108168 107308  861  0  0   62   48   728 0.947  58.93
 3.02 Intr - 110077 109971  107  2  2  109  116    18 0.846   6.63
 3.01 Init - 112377 111789  589  0  1   73  114   745 0.628  70.99
 3.00 Prom - 112718 112679   40                             -10.45

 4.00 Prom + 112770 112809   40                              -6.76
 4.01 Init + 113470 113536   67  0  1   88   72   150 0.996  12.64
 4.02 Intr + 113647 113712   66  2  0   92   78    34 0.759   1.68
 4.03 Intr + 114903 115000   98  1  2   96   90   124 0.995  13.13
 4.04 Intr + 115213 115362  150  0  0   98   78    98 0.999  10.16
 4.05 Intr + 116466 116591  126  2  0  120  105   233 0.998  29.08
 4.06 Intr + 116727 116846  120  2  0   69   75   100 0.990   7.49
 4.07 Term + 118692 118859  168  2  0   91   36   243 0.999  17.28
 4.08 PlyA + 118919 118924    6                               1.05

 5.00 Prom + 119618 119657   40                             -15.35
 5.01 Init + 121147 121231   85  0  1   72   81   101 0.716   6.96
 5.02 Intr + 122129 122227   99  0  0  107   35    61 0.804   2.78
 5.03 Term + 122382 122812  431  1  2  120   46   294 0.867  23.86
 5.04 PlyA + 123553 123558    6                              -3.44

 6.02 PlyA - 124085 124080    6                               1.05
 6.01 Sngl - 125188 124199  990  1  0   98   52  2258 0.999 218.07
 6.00 Prom - 127314 127275   40                              -6.76

 7.08 PlyA - 127570 127565    6                              -0.45
 7.07 Term - 127666 127646   21  1  0   74   54     6 0.166  -5.89
 7.06 Intr - 128709 128526  184  2  1   54   94   127 0.109   9.69
 7.05 Intr - 133731 133678   54  2  0  109   93    11 0.131   1.79
 7.04 Intr - 160119 160052   68  0  2   84   94    44 0.387   2.30
 7.03 Intr - 169112 169050   63  2  0   51   94    44 0.347   0.21
 7.02 Intr - 169949 169923   27  2  0  110   87    38 0.755   4.21
 7.01 Init - 176843 176757   87  2  0  117   80   200 0.999  20.74

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  23392  23215  178  1  1   56   72   220 0.959  16.62


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:47465623_47671626|GENSCAN_predicted_peptide_1|567_aa
MCLCRKCRHFGVFCSGGSGSGGGTRRLPRDSASAARRRRRLRRRRQQLRQRQAQVQPLPL
VTTIISVSTNLTTLDNIISKKMNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQY
GAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADS
EKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRA
MAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRMAQQLQQQMQQISAASVWGNLAG
LNTLGPQYLALYLQLLQQTASSGNLNTLSSLHPMGGLNAMQLQNLAALAAAASAAQNTPS
GTNALTTSSSPLSVLTSSGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAAL
NGGLGSSGLSNGTGSTMEALTQAYSGIQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPE
GANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI
QSMNGFQIGMKRLKVQLKRSKNDSKPY

>gi568815587f:47465623_47671626|GENSCAN_predicted_CDS_1|1704_bp
atgtgcctgtgccggaagtgccgccattttggggtgttctgctctggcggcagcggcagc
ggcggcgggacgcggaggctcccccgggattcggcctcagcagcgaggcggcggcggcgg
ctgcggaggcgcaggcagcaactgaggcagcggcaggctcaggtgcagccgctgcccctg
gtaaccaccattatttctgtttctaccaatttgactactttagataacatcatctcaaag
aaaatgaacggcaccctggaccacccagaccaaccagatcttgatgctatcaagatgttt
gtgggccaggttccaaggacctggtctgaaaaggacttgcgggaactcttcgaacagtat
ggtgctgtgtatgaaatcaacgtcctaagggataggagccaaaacccgcctcagagcaaa
gggtgctgttttgttacattttacacccgtaaagctgcattagaagctcagaatgctctt
cacaacatgaaagtcctcccagggatgcatcaccctatacagatgaaacctgctgacagt
gagaagaacaatgcagtggaagacaggaagctgtttattggtatgatttccaagaagtgc
actgaaaatgacatccgagtcatgttctcttcgtttggacagattgaagaatgccggata
ttgcggggacctgatggcctgagccgaggttgtgcatttgtgacttttacaacaagagcc
atggcacagacggctatcaaggcaatgcaccaagcacagaccatggagggttgctcatca
cccatggtggtaaaatttgctgatacacagaaggacaaagaacagaagagaatggcccag
cagctccagcagcagatgcagcaaatcagcgcagcatctgtgtggggaaaccttgctggt
ctaaatactcttggaccccagtatttagcactttatttgcagctccttcagcagactgcc
tcctctgggaacctcaacaccctgagcagcctccacccaatgggagggttgaatgcaatg
cagttacagaatttggctgcactagctgctgcagctagtgcagctcagaacacaccaagt
ggtaccaatgctctcactacatccagcagtcccctcagcgtgctcactagttcagggtcc
tcacctagctctagcagcagtaattctgtcaaccccatagcctcacttggagccctgcag
acattagctggagcaacggctggcctcaatgttggctctttggcaggaatggctgcttta
aatggtggcctgggcagcagtggcctttccaatggcaccgggagcaccatggaggccctc
actcaggcctactcgggtatccagcaatatgctgctgctgcgctccccactctgtacaac
cagaatcttctgacacagcagagtattggtgctgctggaagccagaaggaaggtccagag
ggagccaacctgttcatctaccacctgccccaggagtttggtgatcaggacctgctgcag
atgtttatgccctttgggaatgtcgtgtctgccaaggttttcatagacaagcagacaaac
ctgagcaagtgttttggttttgtaagttacgacaatcctgtttcggcccaagctgccatc
cagtccatgaacggctttcagattggcatgaagcggcttaaagtgcagctcaaacgttcg
aagaatgacagcaagccctactga

>gi568815587f:47465623_47671626|GENSCAN_predicted_peptide_2|201_aa
MAATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLV
QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK
YQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLK
EFHKQITARATKDGTFVISKT

>gi568815587f:47465623_47671626|GENSCAN_predicted_CDS_2|606_bp
atggcggccaccgcgctgctggaggccggcctggcgcgggtgctcttctacccgacgctg
ctctacaccctgttccgcgggaaggtgccgggtcgggcgcaccgggactggtaccaccgc
atcgaccccaccgtgctgctgggcgcgctgccgttgcggagcttgacgcgccagctggta
caggacgagaacgtgcgcggggtgatcaccatgaacgaggagtacgagacgaggttcctg
tgcaactcttcacaggagtggaagagactaggagtcgagcagctgcggctcagcacagta
gacatgactgggatccccaccttggacaacctccagaagggagtccaatttgctctcaag
taccagtcgctgggccagtgtgtttacgtgcattgtaaggctgggcgctccaggagtgcc
actatggtggcagcatacctgattcaggtgcacaaatggagtccagaggaggctgtaaga
gccatcgccaagatccggtcatacatccacatcaggcctggccagctggatgttcttaaa
gagttccacaagcagattactgcacgggcaacaaaggatgggacttttgtcatttcaaag
acatga

>gi568815587f:47465623_47671626|GENSCAN_predicted_peptide_3|518_aa
MESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGREFQLHR
LVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYE
VSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNT
EEFLHLPHRLLTDIISDGVPCSQNPTEAIEAWINFNKEEREAFAESLRTSLKEIGENVHI
YLIGKESSRTHSLAVSLHCAEDDSISVSGQNSLCHQITAACKHGGDLYVVGGSIPRRMWK
CNNATVDWEWCAPLPRDRLQHTLVSVPGKDAIYSLGGKTLQDTLSNAVIYYRVGDNVWTE
TTQLEVAVSGAAGANLNGIIYLLGGEENDLDFFTKPSRLIQCFDTETDKCHVKPYVLPFA
GRMHAAVHKDLVFIVAEGDSLVCYNPLLDSFTRLCLPEAWSSAPSLWKIASCNGSIYVFR
DRYKKGDANTYKLDPATSAVTVTRGIKVLLTNLQFVLA

>gi568815587f:47465623_47671626|GENSCAN_predicted_CDS_3|1557_bp
atggaatcaccagaggagcctggagcatccatggatgagaactactttgtgaactacact
ttcaaagatcggtcacattcaggccgtgtggctcaaggcatcatgaaactgtgtctagag
gaggagctctttgctgatgtcaccatttcggtggaaggccgggagtttcagctccatcgg
ctggtcctctcagctcagagctgcttcttccgatccatgttcacttccaacctgaaggag
gcccacaaccgggtgattgtgctgcaggatgtcagcgagtctgttttccagctcctggtt
gattatatctaccatgggactgtgaaacttcgagctgaggagttgcaggaaatttatgag
gtgtcagacatgtatcagctgacatctctctttgaggaatgctctcggtttttggcccgc
acagtgcaagtgggaaactgccttcaggtgatgtggctggcagatcggcacagtgatcct
gagctctatacggctgccaagcactgtgccaagacccacctggcccagctgcagaataca
gaggaatttctccacttgccccaccgcttactcacagatatcatctcggatggagttccg
tgttctcagaacccaacagaggcaatagaagcctggatcaactttaataaagaggaaaga
gaggcttttgcagagtcactcaggacaagcttgaaggaaattggggagaatgtgcacatt
tacctgattgggaaagagtcatctcgtacccactcgttggctgtgtccttgcactgtgca
gaagatgactccatcagtgtaagtggccaaaacagtttgtgccaccagatcactgcggcc
tgcaagcatggtggagacttgtatgtggtgggagggtccatcccacggcgcatgtggaag
tgcaacaatgccaccgttgactgggagtggtgtgctcctttgcctcgggaccggctccag
cacaccctggtgtctgtgcccgggaaagatgccatatattcactgggtggcaagacactg
caagataccctctccaacgcagtcatttattatcgcgtaggtgataatgtgtggacagag
acaactcagctagaggtggctgtgtcaggggctgctggtgccaacctcaacgggatcatc
tacttactagggggggaggagaatgatctggacttctttaccaaaccttcccgactcatc
cagtgctttgacacagagacagacaaatgccatgtgaagccctatgtgctgccctttgca
ggccgcatgcacgcagctgtgcataaagatctggtgttcatcgtggctgaaggggactcc
ctggtgtgctacaatcccttgctagacagcttcacccggctttgccttcctgaggcctgg
agctctgccccatccctctggaagattgccagctgtaacgggagcatctatgtcttccgg
gaccgatataaaaagggggatgccaacacctacaagcttgaccctgccacttcagccgta
actgtcacaagaggtattaaggtgctgcttaccaatttgcagtttgtgttggcctaa

>gi568815587f:47465623_47671626|GENSCAN_predicted_peptide_4|264_aa
MAAAAVARLWWRGILGASALTRGTGRPSVLLLPVRRESAGADTRPTVRPRNDVAHKQLSA
FGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVP
TRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFAN
HPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWE
AFPVYRQPPESLKLEAGDKKPDAK

>gi568815587f:47465623_47671626|GENSCAN_predicted_CDS_4|795_bp
atggcggcggcggcggtagccaggctgtggtggcgcgggatcttgggggcctcggcgctg
accagggggactgggcgaccctccgttctgttgctgccggtgaggcgggagagcgccggg
gccgacacgcgccccactgtcagaccacggaatgatgtggcccacaagcagctctcagct
tttggagagtatgtggctgaaatcttgcccaagtatgtccaacaagttcaggtgtcctgc
ttcaatgagttagaggtctgtatccatcctgatggcgtcatcccagtgctgactttcctc
agggatcacaccaatgcacagttcaaatctctggttgacttgacagcagtggacgtccca
actcggcaaaaccgttttgagattgtctacaacctgttgtctctgcgcttcaactcacgg
atccgtgtgaagacctacacagatgagctgacgcccattgagtctgctgtctctgtgttc
aaggcagccaactggtatgaaagggagatctgggacatgtttggagtcttctttgctaac
caccctgatctaagaaggatcctgacagattatggcttcgagggacatcctttccggaaa
gactttcctctatctggctatgttgagttacgttatgatgatgaagtgaagcgggtggtg
gcagagccggtggagttggcccaagagttccgcaaatttgacctgaacagcccctgggag
gctttcccagtctatcgccaacccccggagagtctcaagcttgaagccggagacaagaag
cctgatgccaagtag

>gi568815587f:47465623_47671626|GENSCAN_predicted_peptide_5|204_aa
MAATLQFLVCLVVAICLLSGVTTTQPHAGQPMDSTSVGGGLQEPEAPEVMFEVFPPSLGH
GGHSPPLTWLPLQLLWAGLELDVMGQLHIQDEELASTHPGRRLRLLLQHHVPSDLEGTEQ
WLQQLQDLRKGPPLSTWDFEHLLLTGLSCVYRLHAASEAEERGRWAQVFALLAQETLWDL
CKGFCPQDRPPSLGSWASILDPFP

>gi568815587f:47465623_47671626|GENSCAN_predicted_CDS_5|615_bp
atggctgcgaccctgcagttcctggtttgcctggtggtagccatttgtctcctctctggt
gtgactacaacccagccccatgcagggcagcccatggacagcaccagcgtgggaggtggc
ctgcaggagccagaggccccggaagtgatgtttgaggtctttcctcccagcctgggacat
gggggccacagcccaccccttacatggctccccttgcagctgctctgggctgggctggag
ctggatgtcatggggcagctgcacatccaggatgaggaactagcgtccacacacccaggc
cgccgactcagactcctcctgcagcaccacgtgcccagtgacttggagggcactgagcag
tggctgcagcagctccaggacctgcggaaggggcctcctcttagcacttgggactttgaa
catctgctcctcacaggcctgtcctgcgtctaccggctccacgcagctagtgaggctgag
gaacggggccgctgggcccaggtcttcgctctcctggcacaggaaacactctgggacctg
tgcaaaggtttctgcccccaggaccggcccccttccctggggtcctgggcctccatcctt
gaccccttcccctga

>gi568815587f:47465623_47671626|GENSCAN_predicted_peptide_6|329_aa
MLPLLLGLLGPAACWALGPTPGPGSSELRSAFSAARTTPLEGTSEMAVTFDKVYVNIGGD
FDVATGQFRCRVPGAYFFSFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGARRAASQ
SAMLQLDYGDTVWLRLHGAPQYALGAPGATFSGYLVYADADADAPARGPPAPPEPRSAFS
AARTRSLVGSDAGPGPRHQPLAFDTEFVNIGGDFDAAAGVFRCRLPGAYFFSFTLGKLPR
KTLSVKLMKNRDEVQAMIYDDGASRRREMQSQSVMLALRRGDAVWLLSHDHDGYGAYSNH
GKYITFSGFLVYPDLAPAAPPGLGASELL

>gi568815587f:47465623_47671626|GENSCAN_predicted_CDS_6|990_bp
atgctgccgcttctgctgggcctgctgggcccagcggcctgctgggccctgggcccgacc
cccggcccgggatcctctgagctgcgctcggccttctcggcggcacgcaccacccccctg
gagggcacgtcggagatggcggtgaccttcgacaaggtgtacgtgaacatcgggggcgac
ttcgatgtggccaccggccagtttcgctgccgcgtgcccggcgcctacttcttctccttc
acggctggcaaggccccgcacaagagcctgtcggtgatgctggtgcgaaaccgcgacgag
gtgcaggcgctggccttcgacgagcagcggcggccaggcgcgcggcgcgcagccagccag
agcgccatgctgcagctcgactacggcgacacagtgtggctgcggctgcatggcgccccg
cagtacgcgctaggcgcgcccggcgccaccttcagcggctacctagtctacgccgacgcc
gacgctgacgcgcctgcgcgcgggccgcccgcgccccccgagccgcgctcggccttctcg
gcggcgcgcacgcgcagcttggtgggctcggacgctggccccgggccgcggcaccaacca
ctcgccttcgacaccgagttcgtcaacattggcggcgacttcgacgcggcggccggcgtg
ttccgctgccgtctgcccggcgcctacttcttctccttcacgctgggcaagctgccgcgt
aagacgctgtcggttaagctgatgaagaaccgcgacgaggtgcaggccatgatttacgac
gacggcgcgtcgcggcgccgcgagatgcagagccagagcgtgatgctggccctgcggcgc
ggcgacgccgtctggctgctcagccacgaccacgacggctacggcgcctacagcaaccac
ggcaagtacatcaccttctccggcttcctggtgtaccccgacctcgcccccgccgccccg
ccgggcctcggggcctcggagctactgtga

>gi568815587f:47465623_47671626|GENSCAN_predicted_peptide_7|167_aa
MADAASQVLLGSGLTILSQPLMYVKVLIQHYQESDKGEELGPGNVQKEVSSSFDHVIKEF
FASMLTYPFVLVSNLMAVNNCGVIFLKYSFEHTFFSSTVSTLSAAASEPGKAAGAPAAPA
AARAVSAQPGTRSLQPAARSPQPGARSRAQTEPDSTAAPSQFCKKVN

>gi568815587f:47465623_47671626|GENSCAN_predicted_CDS_7|504_bp
atggcggacgcggccagtcaggtgctcctgggctccggtctcaccatcctgtcccagccg
ctcatgtacgtgaaagtgctcatccagcattaccaggagagtgacaagggtgaggagtta
ggacctggaaatgtacagaaagaagtctcatcttcctttgaccacgttatcaaggagttt
tttgcgagtatgttgacctatccctttgtgcttgtctccaatcttatggctgtcaacaac
tgtggagtaatcttcttaaaatacagctttgagcacaccttcttctcctctactgtaagc
accctgtccgctgccgcctcagagccgggaaaagcagccggagcccccgccgcccctgcc
gcagcgcgggcggtcagcgcgcagcccggcacccgcagcctgcagcctgcagcccgcagc
ccgcagcccggagccagatcgcgggctcagaccgaacccgactcgaccgccgcccccagc
cagttttgcaaaaaggtaaactga