GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:32:59

Sequence gi568815597r:150166525_150368810 : 202286 bp : 45.21% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2582   2754  173  1  2   75   86    89 0.332   5.47
 1.02 Intr +  20913  20953   41  0  2  111   84    22 0.226   1.97
 1.03 Intr +  23226  23366  141  1  0   52   57    81 0.396   1.72
 1.04 Term +  26903  26940   38  0  2   74   47    85 0.513   0.50
 1.05 PlyA +  29396  29401    6                               1.05

 2.02 PlyA -  32055  32050    6                               1.05
 2.01 Sngl -  33308  33015  294  2  0   53   37   204 0.910   7.50
 2.00 Prom -  46730  46691   40                              -5.46

 3.08 PlyA -  47421  47416    6                               1.05
 3.07 Term -  54237  54167   71  1  2   50   36   145 0.983   3.60
 3.06 Intr -  56716  56662   55  1  1   18   96   136 0.719   5.95
 3.05 Intr -  60271  60084  188  2  2   48   68   355 0.984  28.91
 3.04 Intr -  62713  62548  166  1  1   58   51   143 0.983   7.13
 3.03 Intr -  64169  64047  123  2  0   25  119    40 0.749   1.58
 3.02 Intr -  65402  65253  150  2  0   92  106    76 0.999  10.16
 3.01 Init -  69262  69209   54  1  0   93   78    79 0.952   8.68
 3.00 Prom -  84794  84755   40                              -4.36

 4.00 Prom +  91214  91253   40                              -4.26
 4.01 Init +  91605  91659   55  2  1   53   61    99 0.932   3.22
 4.02 Intr +  94935  95114  180  1  0   57   98   182 0.867  15.94
 4.03 Intr +  95634  95776  143  1  2   99   66    25 0.998   1.47
 4.04 Intr +  96001  96096   96  0  0  114   78    46 0.988   6.41
 4.05 Intr +  96280  96346   67  0  1  146  105     1 0.979   6.08
 4.06 Intr +  96518  96675  158  0  2   36  111   111 0.966   7.93
 4.07 Intr +  96775  96895  121  0  1   96   55    86 0.987   6.17
 4.08 Intr +  97135  97155   21  2  0  101  115    17 0.802   3.22
 4.09 Term +  98461  98489   29  2  2  103   43    23 0.294  -2.46
 4.10 PlyA +  98534  98539    6                              -1.75

 5.08 PlyA -  98898  98893    6                               1.05
 5.07 Term -  99670  99606   65  2  2  116   55    92 0.992   6.75
 5.06 Intr - 100132 100009  124  1  1  101   47   118 0.995   9.16
 5.05 Intr - 100678 100551  128  2  2   97  105    50 0.996   8.00
 5.04 Intr - 100954 100832  123  2  0   83  110    44 0.985   6.66
 5.03 Intr - 101265 101192   74  2  2  100   89    37 0.999   4.05
 5.02 Intr - 101603 101433  171  1  0   99   60   206 0.999  17.96
 5.01 Init - 102286 102174  113  1  2  100   96   155 0.954  15.39
 5.00 Prom - 104769 104730   40                             -10.74

 6.00 Prom + 105153 105192   40                              -4.36
 6.01 Init + 106294 106339   46  0  1   69  106    72 0.964   6.29
 6.02 Intr + 107563 107646   84  2  0  128  101    57 0.995  10.79
 6.03 Intr + 113194 113217   24  2  0   97  116    -2 0.166   1.50
 6.04 Intr + 116814 117109  296  1  2  114  116    68 0.532   8.93
 6.05 Intr + 117281 117356   76  1  1   83   74    51 0.991   2.29
 6.06 Intr + 117902 117980   79  0  1  131   98    52 0.995   9.11
 6.07 Intr + 118073 118184  112  2  1   52  116    21 0.788   1.68
 6.08 Term + 119906 120430  525  1  0  104   41   101 0.614   1.26
 6.09 PlyA + 124814 124819    6                               1.05

 7.00 Prom + 124839 124878   40                              -7.76
 7.01 Init + 127843 127925   83  0  2   65   93    98 0.736   8.44
 7.02 Term + 141524 141704  181  2  1   91   54   228 0.975  16.78
 7.03 PlyA + 141800 141805    6                               1.05

 8.00 Prom + 145696 145735   40                              -8.36
 8.01 Init + 158419 158563  145  0  1   65   96   132 0.997  11.98
 8.02 Intr + 159227 159357  131  0  2   90  100    84 0.989  10.21
 8.03 Intr + 161796 161942  147  2  0   74   92   141 0.975  13.53
 8.04 Intr + 166455 166675  221  2  2  116   86   252 0.995  24.90
 8.05 Intr + 168411 168717  307  0  1   73   65   297 0.994  22.35
 8.06 Intr + 171636 171802  167  2  2   81   65   158 0.858  11.56
 8.07 Intr + 173874 173953   80  0  2   46   95    29 0.981  -1.41
 8.08 Intr + 176785 176928  144  2  0   47   52    77 0.535   0.25
 8.09 Intr + 177638 177737  100  0  1   99  100    56 0.989   7.07
 8.10 Intr + 177910 178023  114  1  0   76   82    47 0.845   2.46
 8.11 Intr + 179494 179612  119  1  2   64   84   168 0.999  14.11
 8.12 Intr + 179884 179967   84  2  0   98   23    97 0.838   3.99
 8.13 Intr + 182633 182694   62  0  2   47   92    63 0.905   1.05
 8.14 Term + 186309 186455  147  2  0   82   53   113 0.958   5.10
 8.15 PlyA + 189537 189542    6                               1.05

 9.03 PlyA - 190034 190029    6                               1.05
 9.02 Term - 197248 197142  107  2  2   32   52    86 0.418  -2.03
 9.01 Intr - 198412 198091  322  1  1   70   47   291 0.258  18.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 155054 154942  113  0  2   45   47   164 0.813   6.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:150166525_150368810|GENSCAN_predicted_peptide_1|130_aa
MGILADVQLQVGPPGPWLHLVVIAPVPECITGIGIFSSWGSPDVGPLLYDIRAIMWGRDP
AQSHIRCNYRAVKLKVIELYNRQALISRPLEWKSVLATVTVNTECQLDWIEGRKVLILAG
INVGIKVSSY

>gi568815597r:150166525_150368810|GENSCAN_predicted_CDS_1|393_bp
atggggattctggctgatgtccagcttcaagtgggtccaccggggccgtggctccacctg
gtggtcattgccccagtccctgagtgtataactgggattggtatattcagcagttgggga
agccccgatgtggggcccctgctttatgatataagagctatcatgtggggaagagacccc
gcccaaagtcacatccgttgcaattatcgggcagtgaaattgaaagtcatagagctctac
aatcgtcaagctcttattagcagaccgttggaatggaaatctgttttagctactgtaacg
gttaatactgagtgtcaacttgattggattgaaggacgcaaagtattgatcctggctggc
atcaatgtgggcatcaaggtgtcctcctactaa

>gi568815597r:150166525_150368810|GENSCAN_predicted_peptide_2|97_aa
MDDFEEFKTSVEEGTADVVEIARGLDLEVELEDESELPQSHDKTLTDVELLLMDKQRKRF
LEMESTCEDSVNIVEMTTKDLKYYNNLVVKAVAGFED

>gi568815597r:150166525_150368810|GENSCAN_predicted_CDS_2|294_bp
atggatgactttgaggagtttaagacatcagtggaggaaggaactgcagatgtggtagaa
atagcaaggggactagatttagaagtggagcttgaagatgaatctgaattgcctcaatct
catgataaaactttaacagatgtggagttgcttcttatggataagcaaagaaagagattt
cttgagatggaatctacttgtgaagattctgtgaacatagtggaaatgacaacaaaggat
ttaaaatattacaacaacttagttgttaaagcagtggcagggtttgaggattga

>gi568815597r:150166525_150368810|GENSCAN_predicted_peptide_3|268_aa
MEMKKKINLELRNRSPEEVTELVLDNCLCVNGEIEGLNDTFKELEFLSMANVELSSLARL
PSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDL
FNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGP
PEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGE
EEEEEEEGGLRGEKRKRDAEDDGEEEDD

>gi568815597r:150166525_150368810|GENSCAN_predicted_CDS_3|807_bp
atggagatgaagaagaagattaacctggagttaaggaacagatccccggaggaggtgaca
gagttagtccttgataattgcctgtgtgtcaatggggaaattgaaggcctgaatgatact
ttcaaagaactagaatttctgagtatggctaatgtggaactaagttcgctggcccggctt
cccagcttaaataaacttcgaaaattggagcttagtgataatataatttctggaggcttg
gaagtcctggcagagaaatgtccaaatcttacctacctcaatctgagtggaaacaaaata
aaagatctcagtacagtagaagctctgcaaaatcttaaaaatttgaaaagtcttgacctg
tttaactgtgagatcacaaacctggaagattatagagaaagtatttttgaactactgcag
caaatcacatacttagatggatttgatcaggaggataatgaagcgccggactctgaagag
gaggatgatgaggatggcgatgaagatgatgaagaggaagaggaaaatgaagctggtcca
ccggaaggatatgaggaagaggaggaggaagaggaagaggaggatgaggatgaggatgaa
gatgaagatgaagcaggttcagagttgggagagggagaagaggaagtgggcctctcatac
ttaatgaaagaagaaattcaggatgaagaagatgatgatgactatgttgaagaaggggaa
gaagaggaagaagaggaagaaggaggtcttcgaggggagaagaggaaacgagatgctgaa
gacgatggagaggaagaagatgactag

>gi568815597r:150166525_150368810|GENSCAN_predicted_peptide_4|289_aa
MLFSALLLEVIWILAADGGPHGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPH
GYDQPGTEPLDLHNNGHTVQLSLPSTLYLGGLPRKYVAAQLHLHWGQKGSPGGSEHQINS
EATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHK
DQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGT
LFSTEEEPSKLLVQNYRALQPLNQRMVFASFIQAGSSYTTDILRDLSLG

>gi568815597r:150166525_150368810|GENSCAN_predicted_CDS_4|870_bp
atgttgttctccgccctcctgctggaggtgatttggatcctggctgcagatgggggccca
catggtcaggaccattggccagcctcttaccctgagtgtggaaacaatgcccagtcgccc
atcgatattcagacagacagtgtgacatttgaccctgatttgcctgctctgcagccccac
ggatatgaccagcctggcaccgagcctttggacctgcacaacaatggccacacagtgcaa
ctctctctgccctctaccctgtatctgggtggacttccccgaaaatatgtagctgcccag
ctccacctgcactggggtcagaaaggatccccaggggggtcagaacaccagatcaacagt
gaagccacatttgcagagctccacattgtacattatgactctgattcctatgacagcttg
agtgaggctgctgagaggcctcagggcctggctgtcctgggcatcctaattgaggtgggt
gagactaagaatatagcttatgaacacattctgagtcacttgcatgaagtcaggcataaa
gatcagaagacctcagtgcctcccttcaacctaagagagctgctccccaaacagctgggg
cagtacttccgctacaatggctcgctcacaactcccccttgctaccagagtgtgctctgg
acagttttttatagaaggtcccagatttcaatggaacagctggaaaagcttcaggggaca
ttgttctccacagaagaggagccctctaagcttctggtacagaactaccgagcccttcag
cctctcaatcagcgcatggtctttgcttctttcatccaagcaggatcctcgtataccaca
gatatactgcgggatctctccttaggataa

>gi568815597r:150166525_150368810|GENSCAN_predicted_peptide_5|265_aa
MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT
DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYV
SGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFD
ACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMGLWAFITAGGSLRSIQ
RSLLCRRQEDSRVMVYSALRIPPED

>gi568815597r:150166525_150368810|GENSCAN_predicted_CDS_5|798_bp
atgggggctgcggtgtttttcggctgcactttcgtcgcgttcggcccggccttcgcgctt
ttcttgatcactgtggctggggacccgcttcgcgttatcatcctggtcgcaggggcattt
ttctggctggtctccctgctcctggcctctgtggtctggttcatcttggtccatgtgacc
gaccggtcagatgcccggctccagtacggcctcctgatttttggtgctgctgtctctgtc
cttctacaggaggtgttccgctttgcctactacaagctgcttaagaaggcagatgagggg
ttagcatcgctgagtgaggacggaagatcacccatctccatccgccagatggcctatgtt
tctggtctctccttcggtatcatcagtggtgtcttctctgttatcaatattttggctgat
gcacttgggccaggtgtggttgggatccatggagactcaccctattacttcctgacttca
gcctttctgacagcagccattatcctgctccataccttttggggagttgtgttctttgat
gcctgtgagaggagacggtactgggctttgggcctggtggttgggagtcacctactgaca
tcgggactgacattcctgaacccctggtatgaggccagcctgctgcccatctatgcagtc
actgtttccatggggctctgggccttcatcacagctggagggtccctccgaagtattcag
cgcagcctcttgtgccgacggcaggaggacagtcgggtgatggtgtattctgccctgcgc
atcccacccgaggactga

>gi568815597r:150166525_150368810|GENSCAN_predicted_peptide_6|413_aa
MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYGGDVFHVEVNSDFGFPS
DSEREDKGAHGPRPDTVGQRGGSRPSPGPIRCRHRSKVSGNQHTPSHPKQRGSASPMAGS
GAKRSRDGELETSLNTQGCTTEGDLLFAQKCKELQGFIPPLTDLLNGLKMGRFERGLSSF
QQSVAMDRIQRIVGVLQKPQMGERYLGTLLQVEGMLKTWFPQIAAQKSSLGGGKHQLTKH
FPSHHSDSAASSPASPMEKMDQTQLGHLALKPKQPWHLTQWPAMNLTWIHTTPICNPPLS
SPGTISFSHGPLGTGTGIGVILFLQHGVQPFTHSAPTTPVPPTTASPVIPGEPMKLSGEG
PRCYSLPVTLPSDWSYTLSPPSLPTLARKMTIGHREQQRSHPPVAADAHLLNL

>gi568815597r:150166525_150368810|GENSCAN_predicted_CDS_6|1242_bp
atggatgtcctctttgtagccatctttgctgtgccacttatcctgggacaagaatatgag
gatgaagaaagactgggagaggatgaatattatcaggtggtctattattatacagtcacc
cccagttatggtggggatgtatttcatgtagaagtgaacagtgactttggcttcccctct
gatagtgagagggaggacaagggggcccatgggcccaggccagacactgttgggcagagg
ggaggttcacggcccagcccgggtcctatccgctgcaggcatcgatcgaaggtttccggt
aaccagcatacaccatctcatccgaaacagcggggttcggcttctcctatggcaggatct
ggggcgaaaagatcaagagatggtgaactggagaccagtctaaacacccaaggttgtacc
acagagggagacctgctgtttgcccagaagtgtaaagaactccaaggatttatacctcct
ctcacagacctactcaatgggctgaagatgggtcgttttgagagaggattaagcagtttt
cagcagagtgtggcaatggacaggatccagcgtattgtaggtgttttgcagaagccacag
atgggggaacgttacctaggaaccttgctacaggtagaagggatgttaaagacttggttt
ccacaaatagctgcccagaagtcatcattgggtggtggcaagcatcagctgaccaagcat
tttccaagccaccacagtgattcagctgcttcctctcctgcatctcctatggaaaagatg
gaccagacacagctaggacatctagctttaaaaccaaagcagccttggcacctcacacaa
tggccagctatgaacctcacctggatccacaccactccaatttgcaacccccctctcagc
tccccaggtactatctcctttagccatggtcctttaggcactggaaccggcattggcgtc
attcttttcctccagcatggagtgcaacccttcacccactctgccccaaccaccccagtc
ccacctactacagcatctcctgtcatccctggtgagcctatgaaactatctggagagggt
cctcgttgctacagtttgccagtaactctgccatcagactggagctataccctatcccct
cccagtctacccaccttggccagaaagatgaccataggacaccgggagcagcagagaagc
catcctccagttgctgctgatgctcatcttctcaacctctag

>gi568815597r:150166525_150368810|GENSCAN_predicted_peptide_7|87_aa
MAKHLKFIARTVMVQEGNVESAYRTLNRILTMDGLIEDIKHRRYYEKPCCRRQRESYERC
RRIYNMEMARKINFLMRKNRADPWQGC

>gi568815597r:150166525_150368810|GENSCAN_predicted_CDS_7|264_bp
atggcaaaacatctgaagttcatcgccaggactgtgatggtacaggaagggaacgtggaa
agcgcatacaggaccctaaacagaatcctcactatggatgggctcattgaggacattaag
catcggcggtattatgagaagccatgctgccggcgacagagggaaagctatgaaaggtgc
cggcggatctacaacatggaaatggctcgcaagatcaacttcttgatgcgaaagaatcgg
gcagatccgtggcagggctgctga

>gi568815597r:150166525_150368810|GENSCAN_predicted_peptide_8|655_aa
MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQPKTPSSSQPERLPIGNTIQPSQAATFMNDAIEKARKAAE
LQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDAT
GKEIELTHRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSIAPSQRQRRTFK
FHDKGKFEKIAQRLRTKAQLEKLQAEISQAARKTGIHTSTRLALIAPKKELKEGDIPEIE
WWDSYIIPNGFDLTEENPKREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKL
RRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQ
KAHEEANAARKLTAEQRKVKKIKKLKEDISQGVHISVYRVRNLSNPAKKFKIEANAGQLY
LTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTN
KCVLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSESVLESTD

>gi568815597r:150166525_150368810|GENSCAN_predicted_CDS_8|1968_bp
atggcactgtcaaagagggagctggatgagctgaaaccatggatagagaagacagtgaag
agggtcctgggtttctcagagcctacggtggtcacagcagcattgaactgtgtggggaag
ggcatggacaagaagaaggcagccgatcatctgaaaccttttcttgatgattctactctc
cgatttgtggacaaactgtttgaggctgtggaggaaggccgaagctctaggcattccaag
tctagcagtgacaggagcagaaaacgagagctaaaggaggtgtttggtgatgactctgag
atctctaaagaatcatcaggagtaaagaagcgacgaataccccgttttgaggaggtggaa
gaagagccagaggtgatccctgggcctccatcagagagccctggcatgctgactaagctc
cagccaaagactccttcttcctcccaaccagaacgacttcctattggcaacactattcag
ccctcccaggctgccactttcatgaatgatgccattgagaaggcaaggaaagcagctgaa
ctgcaagctcgaatccaagcccagctggcactgaagccaggactcatcggcaatgccaac
atggtgggcctggctaatctccatgccatgggcattgctcccccgaaggtggagttaaaa
gaccaaacgaaacctacaccactgatcctggatgagcaagggcgcactgtagatgcaaca
ggcaaggagattgagctgacacaccgcatgcctactctgaaagccaatattcgtgctgtg
aagagggaacaattcaagcaacaactaaaggaaaagccatcagaagacatggaatccaat
accttttttgacccccgagtctccattgccccttcccagcgccagagacgcacttttaaa
ttccatgacaagggcaaatttgagaagattgctcagcgattacggacaaaggctcaactg
gagaagctacaggcagagatttcacaagcagctcgaaaaacaggcatccatacttcgact
aggcttgccctcattgctcctaagaaggagctaaaggaaggagatattcctgaaattgag
tggtgggactcttacataatccccaatggctttgatcttacagaggaaaatcccaagaga
gaagattattttggaatcacaaatcttgttgaacatccagcccagctcaatcctccagtt
gacaatgacacaccagttactctgggagtatatcttaccaagaaggaacagaaaaaactt
cggagacaaacaaggagggaagcacagaaggaactacaagaaaaagtcaggctgggcctg
atgcctcctccagaacccaaagtgagaatttctaatttgatgcgagtattaggaacagaa
gctgttcaagaccccacgaaggtagaagcccacgtcagagctcagatggcaaaaagacag
aaagcgcatgaagaggccaacgctgcccgaaaactcacagcagaacagagaaaggtcaag
aaaattaaaaagcttaaagaagacatttcacagggggtacacatatctgtatatagagtt
cgaaatttgagcaacccagccaagaagttcaagattgaagccaatgctgggcaactgtac
ctgacaggggtggtggtactgcacaaggatgtcaacgtggtagtagtggaagggggcccc
aaggcccagaagaaatttaagcgtcttatgctgcatcggataaagtgggatgaacagaca
tctaacacaaagggagatgatgatgaggagtctgatgaggaagctgtgaagaaaaccaac
aaatgtgtactagtctgggagggtacagccaaagaccggagctttggagagatgaagttt
aaacagtgtcctacagagaacatggctcgtgagcatttcaaaaagcatggggctgaacac
tactgggaccttgcgctgagtgaatctgtgttagagtccactgattga

>gi568815597r:150166525_150368810|GENSCAN_predicted_peptide_9|142_aa
SPPTLTSPEPLHPMIDDSTVVFFVLYTPRRQALNGLHGVGYRLEFSIQRGLQSPCRRGRR
GGGLTAASAAAGRHLPGLHKRCCSSGGGGGGGGGSGQNNHCECVKAVGGCSHRPQLLGGA
TRDKMAGSHLAAPQKMRMRQIQ

>gi568815597r:150166525_150368810|GENSCAN_predicted_CDS_9|429_bp
tcacccccaacactcacatctccggagccacttcatccaatgatagacgatagtactgtg
gtgttttttgttctctatacaccaagacgacaagccttgaatggactccatggtgttggt
taccgactggaattttcgatccaacgaggactccagagcccctgccgaagaggccgacga
ggaggaggccttactgctgcctccgccgccgccggccgccatcttcccggtttgcacaag
cgctgctgctcctctggcggcggcggcggcggcggcggcgggagcgggcaaaacaatcac
tgcgagtgcgtgaaagccgtagggggctgcagccatcgcccccaactcctcggaggagca
acgcgcgacaaaatggctggcagccatcttgcggcaccacaaaagatgcgcatgcgccag
atccagtga