GENSCAN 1.0	Date run:  6-Nov-116	Time: 11:14:52

Sequence gi568815575r:2807274_3029275 : 222002 bp : 44.23% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    912    947   36  1  0  126   88     5 0.492   2.53
 1.02 Intr +   4063   4179  117  2  0  104  115    44 0.965   9.14
 1.03 Term +   5237   5361  125  0  2  105   39    30 0.552  -1.65
 1.04 PlyA +   6716   6721    6                               1.05

 2.05 PlyA -   6768   6763    6                               1.05
 2.04 Term -  12637  12522  116  2  2   50   39   110 0.906   1.03
 2.03 Intr -  16761  16737   25  0  1   93  115    26 0.870   3.40
 2.02 Intr -  22570  22310  261  1  0  108   49   185 0.947  14.28
 2.01 Init -  22917  22861   57  0  0   96   23    52 0.380  -1.02
 2.00 Prom -  24647  24608   40                              -7.96

 3.00 Prom +  31776  31815   40                              -1.96
 3.01 Init +  35876  36081  206  1  2   79  110   209 0.853  18.54
 3.02 Intr +  46707  46881  175  0  1   70  105   241 0.960  23.94
 3.03 Intr +  47720  47882  163  1  1   73  127   146 0.999  16.55
 3.04 Intr +  49225  49351  127  2  1   63   92    82 0.983   5.84
 3.05 Intr +  52570  52792  223  1  1   76   98   138 0.918  11.73
 3.06 Intr +  54249  54449  201  2  0   72   95    73 0.839   5.88
 3.07 Term +  73779  73940  162  2  0   92   36   324 0.829  25.54
 3.08 PlyA +  74987  74992    6                               1.05

 4.11 PlyA -  75032  75027    6                               1.05
 4.10 Term - 100359  99998  362  1  2  122   42   282 0.989  21.70
 4.09 Intr - 101569 101448  122  0  2   60   79    76 0.994   4.04
 4.08 Intr - 102706 102544  163  2  1   91   98   121 0.998  12.43
 4.07 Intr - 103520 103386  135  0  0   64  113    80 0.997   8.64
 4.06 Intr - 108419 108283  137  1  2   58   97    21 0.875   0.21
 4.05 Intr - 110954 110531  424  0  1   78  121   454 0.984  40.62
 4.04 Intr - 113450 113328  123  0  0  106   36   133 0.963  10.46
 4.03 Intr - 114751 114630  122  0  2   65   77    28 0.590  -0.46
 4.02 Intr - 118492 118343  150  0  0   98   77    90 0.652   8.18
 4.01 Init - 122002 121959   44  1  2   67   51   112 0.877   3.29
 4.00 Prom - 125734 125695   40                              -7.56

 5.14 PlyA - 126772 126767    6                               1.05
 5.13 Term - 127917 127559  359  1  2   73   36   146 0.840   2.57
 5.12 Intr - 129590 129469  122  1  2   91   79    76 0.960   7.14
 5.11 Intr - 130984 130822  163  2  1   88   92   190 0.992  18.43
 5.10 Intr - 135926 135792  135  0  0   93  116    44 0.992   8.24
 5.09 Intr - 138861 138725  137  2  2   93   97    86 0.931  10.21
 5.08 Intr - 142454 142031  424  0  1   98   82   213 0.908  14.62
 5.07 Intr - 145992 145870  123  1  0   34   76    84 0.165   2.36
 5.06 Intr - 148264 148143  122  0  2   94   82   100 0.246  10.14
 5.05 Intr - 152329 152099  231  0  0   37   76   102 0.274   0.79
 5.04 Intr - 161027 160876  152  2  2   65   93   120 0.740   9.16
 5.03 Intr - 165833 165765   69  2  0  114   65    13 0.296   0.98
 5.02 Intr - 166745 166638  108  2  0   63   61    48 0.356   0.08
 5.01 Init - 172074 172009   66  0  0   58  121    84 0.889   9.77
 5.00 Prom - 173106 173067   40                              -4.56

 6.00 Prom + 190641 190680   40                              -2.86
 6.01 Init + 192925 192947   23  0  2   89   93    11 0.644   0.98
 6.02 Intr + 202757 202878  122  2  2  101   94    42 0.912   6.24
 6.03 Intr + 205774 205899  126  2  0   54   52   184 0.402  12.05
 6.04 Intr + 207697 208120  424  2  1   69   63   226 0.962  11.12
 6.05 Intr + 211261 211397  137  1  2   82  106    18 0.992   3.21
 6.06 Intr + 216748 216882  135  2  0   82   55   254 0.121  22.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 216748 216896  149  2  2   82   44   251 0.869  18.16


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:2807274_3029275|GENSCAN_predicted_peptide_1|92_aa
XGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNRRNCFRTHGNQKGVPIP
TVFALGFAFGLKNPKTFPCAPSAGEWAVSTVS

>gi568815575r:2807274_3029275|GENSCAN_predicted_CDS_1|279_bp
ngtggagatcaccattcaacgtatggcaatccagaaggcaatatggtagcaaaaatcgtg
tctcccatcgtatccgtggtggtggtgacactgctgggagcagcagccagttatttcaaa
ctaaacaataggagaaattgtttcaggacccatggaaaccagaaaggggtgcccattcct
acggtgtttgctttaggatttgcatttggcctcaaaaatcctaaaaccttcccatgcgct
ccctctgctggtgaatgggcagtatcaaccgttagctaa

>gi568815575r:2807274_3029275|GENSCAN_predicted_peptide_2|152_aa
MVSGAAGSGRGPADLRPGASPATPLRLNTHAPSNDNAPGTPPDLSGVSSCPAAPRTCLEF
WASSSSTPAGAPRSPLSTPWTTPALPDASICTSSELGLPLPAPPGQEAMESLAAALYEVH
NWAQIKVVVEAFRILKEAEKALNDTPKTNFYV

>gi568815575r:2807274_3029275|GENSCAN_predicted_CDS_2|459_bp
atggtcagtggcgccgcgggcagtgggcgcggacctgcagacctgcgcccgggagcatca
cctgcgaccccgctgcgtcttaacacccatgcgcccagcaacgacaacgcccccgggaca
ccacccgacctcagcggtgtcagcagctgccccgccgccccgcgcacctgcttggagttc
tgggcatcctcttcctccaccccagctggcgccccccggtcacccctctccactccctgg
accacccctgcgctcccggacgccagtatctgcacctcctccgagcttgggctgcctctg
cccgcgccccccggccaggaagccatggagagcttggcagcagctttgtatgaagttcat
aactgggctcagatcaaagttgtggtggaagcctttagaattctgaaggaagcagaaaag
gcattgaatgacacccccaagaccaacttttatgtttaa

>gi568815575r:2807274_3029275|GENSCAN_predicted_peptide_3|418_aa
MAPSPLLSLRSVTLVFLLIFTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLI
TPQVSSLLRVILSKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCV
FLDADTLVLSNVDELFDRGEFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSF
DGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKP
WNYKYNPQSGSVLEQGSASSSQHQAAFLHLWWTVYQNNVLPLYKSVQAGEARASPGHTLC
HSDVGGPCADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEG
RRSEDVDLAVSVSQISIEEKVKELSPEEERRKWEEGRIDYMGKDAFARIQEKLDRFLQ

>gi568815575r:2807274_3029275|GENSCAN_predicted_CDS_3|1257_bp
atggccccgtcacccctgctgtccctcaggagtgtaactctggtgtttctgttgattttc
acagtgactgatcaggcttttgtcacactagccaccaatgacatctactgccagggcgcc
ctggtcctggggcagtcactgaggagacacaggctgacgaggaagctggtggtgttgatc
actcctcaggtgtccagcctgctcagggtcatcctctcgaaggtgttcgatgaagtcatt
gaagtgaatctaatcgatagtgccgactacatccacctggcctttctgaagagacctgag
ctcgggctcaccctcaccaagcttcactgttggactctcactcactacagcaagtgtgtc
ttcctggatgcagacactctggtgctgtccaatgtcgatgagctgtttgacaggggagag
ttttctgcggccccggaccccggatggccggattgcttcaatagcggggtgtttgtcttc
cagccttctctccacacgcataaactcctgctacagcacgccatggaacacggcagcttt
gacggggcagaccaaggcttactgaatagtttcttcaggaactggtcgaccacagacatc
cacaagcacctgccgttcatctataacttgagtagtaacacgatgtacacttacagccct
gccttcaagcaattcggttccagtgcaaaggtcgtccactttttggggtccatgaaacct
tggaactacaagtacaatccacagagtggctcggtgttggagcaaggctcagcgtccagc
agccagcaccaggcggcattccttcatctctggtggacggtctaccagaacaacgtgctg
cccctttataaaagcgtccaagcgggggaagcacgcgcgtctcctggtcacacactttgc
cacagtgatgtgggggggccgtgtgcggattcagcctctggtgttggagagccgtgtgaa
aattcaacacccagtgcgggcgtgccgtgtgcaaattcaccactgggttctaaccagcct
gctcagggccttccggagccgacccagatagtggatgagaccctgtccctacctgaagga
cgccgttcagaagatgtcgacctggccgtctctgtttcccagatctccatcgaagagaag
gtgaaggaattgagccccgaggaagagaggaggaagtgggaggaaggccgtatcgactac
atggggaaggacgcgtttgctcgcatccaggagaagctggaccggttcctgcagtaa

>gi568815575r:2807274_3029275|GENSCAN_predicted_peptide_4|593_aa
MRSAARRGRAAPAARDSLPVLLFLCLLLKTCEPKTANAFKPNILLIMADDLGTGDLGCYG
NNTLRTPNIDQLAEEGVRLTQHLAAAPLCTPSRAAFLTGRHSFRSGMDASNGYRALQWNA
GSGGLPENETTFARILQQHGYATGLIGKWHQGVNCASRGDHCHHPLNHGFDYFYGMPFTL
TNDCDPGRPPEVDAALRAQLWGYTQFLALGILTLAAGQTCGFFSVSARAVTGMAGVGCLF
FISWYSSFGFVRRWNCILMRNHDVTEQPMVLEKTASLMLKEAVSYIERHKHGPFLLFLSL
LHVHIPLVTTSAFLGKSQHGLYGDNVEEMDWLIGKVLNAIEDNGLKNSTFTYFTSDHGGH
LEARDGHSQLGGWNGIYKGGKGMGGWEGGIRVPGIFHWPGVLPAGRVIGEPTSLMDVFPT
VVQLVGGEVPQDRVIDGHSLVPLLQGAEARSAHEFLFHYCGQHLHAARWHQKDSGSVWKV
HYTTPQFHPEGAGACYGRGVCPCSGEGVTHHRPPLLFDLSRDPSEARPLTPDSEPLYHAV
IARVGAAVSEHRQTLSPVPQQFSMSNILWKPWLQPCCGHFPFCSCHEDGDGTP

>gi568815575r:2807274_3029275|GENSCAN_predicted_CDS_4|1782_bp
atgcgatccgccgcgcggaggggacgcgccgcgcccgccgccagggactctttgccggtg
ctactgtttttatgcttgcttctgaagacgtgtgaacctaaaactgcaaatgcctttaaa
ccaaatatcctactgatcatggcggatgatctaggcactggggatctcggttgctacggg
aacaatacactgagaacgccgaatattgaccagcttgcagaggaaggtgtgaggctcact
cagcacctggcggccgccccgctctgcaccccaagccgagctgcattcctcacagggaga
cattccttcagatcaggcatggacgccagcaatggataccgggcccttcagtggaacgca
ggctcaggtggactccctgagaacgaaaccacttttgcaagaatcttgcagcagcatggc
tatgcaaccggcctcataggaaaatggcaccagggtgtgaattgtgcatcccgcggggat
cactgccaccaccccctgaaccacggatttgactatttctacggcatgcccttcacgctc
acaaacgactgtgacccaggcaggccccccgaagtggacgccgccctgagggcgcagctc
tggggttacacccagttcctggcgctggggattctcaccctggctgccggccagacctgc
ggtttcttctctgtctccgcgagagcagtcaccggcatggccggcgtgggctgcctgttt
ttcatctcttggtactcctccttcgggtttgtgcgacgctggaactgtatcctgatgaga
aaccatgacgtcacggagcaacccatggttctggagaaaacagcgagtcttatgctaaag
gaagctgtttcctatattgaaagacacaagcatgggccatttctcctcttcctttctttg
ctgcatgtgcacattccccttgtgaccacgagtgcattcctggggaaaagtcagcatggc
ttatatggtgataatgtggaggagatggactggctcataggtaaggttcttaatgccatc
gaagacaatggtttaaagaactcaacattcacgtatttcacctctgaccatggaggacat
ttagaggcaagagatggacacagccagttagggggatggaacggaatttacaaaggtggg
aagggcatgggaggatgggaaggtgggatccgcgtgcccgggatcttccactggccgggg
gtgctcccggccggccgagtgattggagagcccacgagcctgatggacgtgttccctact
gtggtccagctggtgggtggcgaggtgccccaggacagggtgattgatggccacagcctg
gtacccttgctgcagggagctgaggcacgctcggcacatgagttcctgtttcattactgt
gggcagcatcttcacgcagcacgctggcaccagaaggacagtggaagcgtctggaaggtt
cattacacgaccccgcagttccaccccgagggagcgggggcctgctacggccgaggcgtc
tgcccatgctccggggagggcgtgacccatcacagaccccctttgctctttgacctctcc
agggacccctccgaggcacggcccctgacccccgactccgagcccctgtaccacgccgtg
atagcaagggtaggtgccgcggtgtcggagcatcggcagaccctgagtcctgtgccccag
cagttttccatgagcaacatcctgtggaagccgtggctgcagccgtgctgcggacatttc
ccgttctgttcatgccacgaggatggggatggcaccccctga

>gi568815575r:2807274_3029275|GENSCAN_predicted_peptide_5|736_aa
MEQKGEFKNDTLIYEFFHIVAKPHPLPIKSSTYTTFQSARVTRFFLDAEKECRCQEGQVE
AALIAMGGTCQGTQRLSTAGESESATHMREPAVQCRRDSQCVSVLAGRRRFFQGAASPLH
PASVALTQLHVRWASTATIGQVSGFPGKIRVSPTTNLGDSDYIFTASHWGLGHYGPAVHV
HSQGGIDERGSNDSGRLYVTNPCGNVPSWTPNIDRLAEDGVKLTQHISAASLCTPSRAAF
LTGRYPVRSGMVSSIGYRVLQWTGASGGLPTNETTFAKILKEKGYATGLIGKWHLGLNCE
SASDHCHHPLHHGFDHFYGMPFSLMGDCARWELSEKRVNLEQKLNFLFQVLALVALTLVA
GKLTHLIPVSWMPVIWSALSAVLLLASSYFVGALIVHADCFLMRNHTITEQPMCFQRTTP
LILQEVASFLKRNKHGPFLLFVSFLHVHIPLITMENFLGKSLHGLYGDNVEEMDWMVGRI
LDTLDVEGLSNSTLIYFTSDHGGSLENQLGNTQYGGWNGIYKGGKGMGGWEGGIRVPGIF
RWPGVLPAGRVIGEPTSLMDVFPTVVRLAGGEVPQDRVIDGQDLLPLLLGTAQHSDHEFL
MHYCERFLHAARWHQRDRGTMWKVHFVTPVFQPEGAGACYGRKVCPCFGEKVVHHDPPLL
FDLSRDPSETHILTPASEPVFYQVMERVQQAVWEHQRTLSPVPLQLDRLGNIWRPWLQPC
CGPFPLCWCLREDDPQ

>gi568815575r:2807274_3029275|GENSCAN_predicted_CDS_5|2211_bp
atggagcagaaaggagaattcaagaatgacacgctcatttatgaatttttccacattgtc
gccaagccacatccattgccaataaaatcttccacatacactacctttcaatctgctcgt
gtgaccagatttttcctggatgctgaaaaagaatgcaggtgtcaagaagggcaggtggaa
gctgcattgatagccatgggtggcacctgccaaggaactcaaaggttgtcaacagcaggg
gagagtgaatcagctacgcacatgcgtgagccagccgttcagtgccgccgagacagccag
tgcgtgtctgttttggcaggaagaagacgtttcttccaaggagcagcctccccgctacat
ccagccagtgtcgcccttacacagctgcatgtcaggtgggcatcaaccgctaccatcggc
caggtgtctggttttccagggaaaatcagggtttcccctactacaaaccttggagactca
gattacatctttactgcatcccactggggattgggacactatggccctgctgtccatgtg
cattcccagggtggcatcgatgaaagaggcagcaatgatagtggcaggctgtatgtcacc
aacccctgcggaaatgttccctcatggactccgaatattgaccgccttgcagaggacggc
gtgaagctgacccaacacatctctgccgcatctttgtgcaccccaagcagagccgccttc
ctcacgggcagataccctgtgcgatcagggatggtttccagcattggttaccgtgttctt
cagtggaccggagcatctggaggtcttccaacaaatgagacaacttttgcaaaaatactg
aaagagaaaggctatgccactggactcattggaaaatggcatctgggtctcaactgtgag
tcagccagtgatcattgccaccaccctctccatcatggctttgaccatttctacggaatg
cctttctccttgatgggtgattgcgcccgctgggaactctcagagaagcgtgtcaacctg
gaacaaaaactcaacttcctcttccaagtcctggccttggttgccctcacactggtagca
gggaagctcacacacctgatacccgtctcgtggatgccggtcatctggtcagccctttcg
gccgtcctcctcctcgcaagctcctattttgtgggtgctctgattgtccatgccgattgc
tttctgatgagaaaccacaccatcacggagcagcccatgtgcttccaaagaacgacaccc
cttattctgcaggaggttgcgtcctttctcaaaaggaataagcatgggcctttcctcctc
tttgtttcctttctacacgttcacatccctcttatcactatggagaacttcctcgggaag
agtctccacgggctgtatggggacaacgtagaggagatggactggatggtaggacggatc
cttgacactttggacgtggagggtttgagcaacagcaccctcatttattttacgtcggat
cacggcggttccctagagaatcaacttggaaacacccagtatggtggctggaatggaatt
tataaaggtgggaagggcatgggaggatgggaaggtgggatccgcgtgcccgggatcttc
cgctggcccggggtgctcccggccggccgagtgattggcgagcccacgagtctgatggac
gtgttccccaccgtggtccggctggcgggcggcgaggtgccccaggacagagtgattgac
ggccaagaccttctgcccttgctcctggggacagcccaacactcagaccacgagttcctg
atgcattattgtgagaggtttctgcacgcagccaggtggcatcaacgggacagaggaaca
atgtggaaagtccactttgtgacgcctgtgttccagccagagggagccggtgcctgctat
ggaagaaaggtctgcccgtgctttggggaaaaagtagtccaccacgatccacctttgctc
tttgacctctcaagagacccttctgagacccacatcctcacaccagcctcagagcccgtg
ttctatcaggtgatggaacgagtccagcaggcggtgtgggaacaccagcggacactcagc
ccagttcctctgcagctggacaggctgggcaacatctggagaccgtggctgcagccctgc
tgtggcccgttccccctctgctggtgccttagggaagatgacccacaataa

>gi568815575r:2807274_3029275|GENSCAN_predicted_peptide_6|323_aa
MKQLLYDCTPNIDRLASEGVRLTQHLAAASMCTPSRAAFLTGRYPIRSGMVSAYNLNRAF
TWLGGSGGLPTNETTFAKLLQHRGYRTGLIGKWHLGLSCASRNDHCYHPLNHGFHYFYGV
PFGLLSDCQASKTPELHRWLRIKLWISTVALALVPFLLLIPKFARWFSVPWKVIFVFALL
AFLFFTSWYSSYGFTRRWNCILMRNHEIIQQPMKEEKVASLMLKEALAFIERYKREPFLL
FFSFLHVHTPLISKKKFVGRSKYGRYGDNVEEMDWMVGKILDALDQERLANHTLVYFTSD
NGGHLEPLDGAVQLGGWNGIYKX

>gi568815575r:2807274_3029275|GENSCAN_predicted_CDS_6|969_bp
atgaagcaattgctgtatgactgcacacctaatattgaccgcctggcaagtgaaggagtg
aggcttacccagcatctcgcagctgcttccatgtgcaccccaagtcgggctgccttcctg
accggccggtaccccatcagatcagggatggtgtctgcctacaacctgaaccgtgccttc
acgtggcttggtgggtcaggtggtcttcccaccaatgaaacgacttttgccaagctgctg
cagcaccgtggctaccgcacgggactcataggcaaatggcacctgggtttgagctgcgcc
tctcggaatgatcactgttaccacccgctcaaccatggttttcactacttttacggggtg
ccttttggacttttaagcgactgccaggcatccaagacaccagaactgcaccgctggctc
aggatcaaactgtggatctccacggtagcccttgccctggttccttttctgcttctcatt
cccaagttcgcccgctggttctcagtgccatggaaggtcatctttgtctttgctctcctc
gcctttctgtttttcacttcctggtactctagttatggatttactcgacgttggaattgc
atccttatgaggaaccatgaaattatccagcagccaatgaaagaggagaaagtagcttcc
ctcatgctgaaggaggcacttgctttcattgaaaggtacaaaagggaaccttttctcctc
tttttttccttcctgcacgtacatactccactcatctccaaaaagaagtttgttgggcgc
agtaaatatggcaggtatggggacaatgtagaagaaatggattggatggtgggtaaaatc
ctggatgccctggaccaggagcgcctggccaaccacaccttggtgtacttcacctctgac
aacgggggccacctggagcccctggacggggctgttcagctgggtggctggaacgggatc
tacaaagnn