GENSCAN 1.0	Date run:  8-Nov-116	Time: 13:39:31

Sequence gi568815590r:86114416_86330277 : 215862 bp : 38.54% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7139   7276  138  1  0    6   63   274 0.934  16.44
 1.02 Intr +  19251  19327   77  2  2   15   87    98 0.173  -0.21
 1.03 Intr +  25042  25220  179  1  2   95   63   158 0.797  12.64
 1.04 Intr +  27035  27114   80  0  2   69   90    53 0.644   1.95
 1.05 Intr +  35697  35873  177  2  0   21   30   224 0.019   9.09
 1.06 Intr +  37051  37125   75  0  0   84   64    88 0.903   4.79
 1.07 Intr +  38401  38443   43  0  1  136   78     4 0.834   1.09
 1.08 Intr +  43031  43172  142  0  1   72   64    99 0.043   4.39
 1.09 Intr +  49458  49580  123  0  0   74   97    40 0.023   2.28
 1.10 Intr +  59715  59864  150  0  0   92   81    27 0.000   0.76
 1.11 Intr +  62886  63010  125  0  2   68   36    74 0.004  -0.49
 1.12 Intr +  72232  72335  104  2  2   92   81    26 0.090   1.27
 1.13 Term +  75546  75803  258  2  0   86   44   180 0.269   7.97
 1.14 PlyA +  77395  77400    6                               1.05

 2.05 PlyA -  80055  80050    6                               1.05
 2.04 Term -  84781  84594  188  2  2   77   42   119 0.653   2.87
 2.03 Intr -  95514  95420   95  2  2   67   80   122 0.579   7.99
 2.02 Intr - 121788 121647  142  1  1   27   32   163 0.049   3.09
 2.01 Init - 137740 137401  340  1  1   26   44   272 0.264  14.07
 2.00 Prom - 139605 139566   40                              -2.85

 3.00 Prom + 140962 141001   40                              -7.35
 3.01 Init + 143396 143448   53  1  2   71  115    58 0.725   7.48
 3.02 Intr + 144973 145048   76  1  1   79   67    58 0.148   1.40
 3.03 Intr + 177183 177350  168  2  0   62   81    41 0.292   0.02
 3.04 Intr + 186914 186991   78  1  0   98   87    74 0.721   7.13
 3.05 Term + 187088 187414  327  1  0   71   45   111 0.649  -1.18
 3.06 PlyA + 188150 188155    6                               1.05

 4.02 PlyA - 188842 188837    6                               1.05
 4.01 Term - 195704 195538  167  0  2   76   38   121 0.504   3.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:86114416_86330277|GENSCAN_predicted_peptide_1|556_aa
SKTPPFQKKEEEEEEEEEEEEEKEKEGKGEGEGEGGKKKEYTNGGKCHGKNCNPTPVSKC
SMGTQMSTLTRLCSYMIDNVILLMNGALQKKSVKEILGKCHPLGRFTEMEAVNIAETPSD
LFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKFEADRRAFIITLNSFGTELSKE
DRETLYPTFGKLYPEGLRLLAQAEDFDQMKNVADHYGVYKPLFEAVGGSGGKTLEDVFYE
REVQMNVLAFNRQFHYVAFPLTPPFSSVIRAAVFSFHHLLNVWSVIEIQLITALLNINDI
WLLIVTRSSGSHLTNYPVQQKESLLSNSNKNVLGLPVTGLPRHFRLISDYCTSSEQGSVG
VGPTEPGMGYNLLVCHLLRQLEKCSTWAGESRFSSVPGRRRHSRYKKISSSSSQKCRCVT
KVIRNVADVMQACTYLGSCGSRRPGDPGDFQKHESNCMYRLQSGFLARVKLAGIACLQLF
QCKLAQCKLLVDLSFWGLEDGGPLVTAPLGSAPVGTLCGGSNSTFPFYIALAEVLHEGSA
PLANFCLDIQAFPYIL

>gi568815590r:86114416_86330277|GENSCAN_predicted_CDS_1|1671_bp
agcaagactccaccatttcaaaagaaggaggaggaggaggaggaggaggaggaggaggag
gaggagaaggagaaagaaggaaaaggagaaggagaaggagaaggaggaaagaaaaaagaa
tatacaaatggtggaaagtgccatgggaaaaactgcaaccccacccctgtcagcaaatgc
tcgatggggacccagatgtctacccttacccggctgtgcagttatatgatagacaatgtg
attctgctgatgaatggtgcattgcagaaaaaatctgtgaaagaaattctggggaagtgc
caccccttgggccgtttcacagaaatggaagctgtcaacattgcagagacaccttcagat
ctctttaatgccattctgatcgaaacgccattagctccattcttccaagactgcatgtct
gaaaatgctctagatgaactgaatattgaattgctacgcaataaactatacaagtttgag
gccgacagacgtgcttttatcatcactcttaactcctttggcactgaattgagcaaagaa
gaccgagagaccctctatccaaccttcggcaaactctatcctgaggggttgcggctgttg
gctcaagcagaagactttgaccagatgaagaacgtagcggatcattacggagtatacaaa
cctttatttgaagctgtaggtggcagtgggggaaagacattggaggacgtgttttacgag
cgtgaggtacaaatgaatgtgctggcattcaacagacagttccactacgtggcttttcca
ctgactccccctttctcctcagtcattcgtgctgcagttttcagcttccaccacttgctg
aacgtttggtcagtaattgaaatccaactcatcacagccctactcaacatcaatgacatc
tggctccttattgtcacaaggagctcaggctcccatctcaccaactacccagtccagcag
aaagagtccctcttgtccaatagcaacaaaaatgttctgggtttgccagtgactggtctg
ccaaggcacttcaggttgatctcagactactgcactagcagtgagcaaggctctgtgggc
gtgggacccactgagccaggcatgggatataatctcctggtatgccatttgctaagacag
ttggaaaagtgcagtacttgggcaggagagtcccgtttttccagtgtaccaggaagaaga
cgacactccagatataaaaaaataagctctagctcaagtcaaaaatgcagatgtgtaact
aaagtgattcgcaacgtagcagatgtaatgcaggcttgcacctatttaggcagctgtgga
tccaggagaccaggagacccaggagatttccagaagcatgagagtaactgtatgtacagg
ttacaaagtggctttcttgcaagggtgaagctggctggtattgcatgtctgcagcttttc
cagtgcaagcttgcacagtgcaagctgctggtggatctatcattctggggtctggaggat
ggtggccctcttgtcacagctccactaggcagtgccccagtggggactctgtgtgggggc
tccaactccacatttcctttctacattgctctagcggaggttctccatgagggctctgct
cctttggcaaacttctgcctggacatccaggcatttccatacatcctctga

>gi568815590r:86114416_86330277|GENSCAN_predicted_peptide_2|254_aa
MPRYRRISTSINTIQENVTSPNELNKTPGTNPGTTMMCDISYRKFKLAVQRKLKEIQDNT
EKEFRILSDKSNKEIEIINKNEAEILELKSAIGILKNASESFNSRMDQAEEKINFSGEIE
DVVEIAGELEVELQAHDKICTDEELLLVNEQRKWFLEIYNWIPVIGFRAHSKSGMFLSQD
PELLTSAKTLIPSQCGKTLSAVSHTLRQGGTGVDGGCILAIEKVLVVMEPSHANSVEEGF
EIQPRREEDSYYFT

>gi568815590r:86114416_86330277|GENSCAN_predicted_CDS_2|765_bp
atgcccagatacagaagaatatctactagcatcaacaccattcaggaaaatgtgacctca
ccaaatgaactaaataagacaccagggaccaaccctggaacaacaatgatgtgtgatatt
tcatatagaaaattcaaattagctgtgcagaggaaactcaaagaaattcaagacaacact
gagaaggaattcagaattctatcagataaatctaacaaagagattgaaataattaataag
aatgaagcagaaattctggagctgaaaagtgcaattggcatactgaagaatgcatcagag
tcctttaacagcagaatggatcaagcagaagaaaaaatcaacttcagtggagaaattgaa
gatgtggtggaaatagcaggagaactagaagtggagctacaagctcatgataaaatttgt
acagatgaggagttgcttcttgtgaatgagcaaagaaaatggtttcttgagatctataac
tggataccagtcattggatttagggcccactccaaatccgggatgttcctgtctcaagat
cccgaacttcttacatctgcaaagacccttattccaagccaatgtggtaagactctatca
gctgtttctcacaccttgagacagggtgggacaggggtggacggtgggtgcattctagct
attgagaaggtgctggtggtcatggagccctcccatgctaactcagtggaagagggtttt
gaaatacaaccaaggagagaagaagatagctattattttacttaa

>gi568815590r:86114416_86330277|GENSCAN_predicted_peptide_3|233_aa
MVTNMNVKELHTVEIDPCSQDKPDILEKKKLKNYPIQLEEYEKYSISSYVESGSTKNERN
EENCSSTPETKLTKPLSEGNLVYVVASNDSFTTVSYKAKRTSSSKREPPWVFKVLKCINP
AESEKGLISWLGPWVRDSSRKLRKSSGPHETKMPDLPWQISGGRDQKAQSSGHAGIGLHI
NLENPVGDHVQLQILLSLREINSELNLSQYNIIKFPLDSIFLPGMTQDEDELG

>gi568815590r:86114416_86330277|GENSCAN_predicted_CDS_3|702_bp
atggtcacaaacatgaatgtaaaagagctccacacagttgaaatagacccatgctcccag
gacaaacctgatatactggagaaaaaaaaattgaagaactatccgatacaacttgaggag
tatgagaagtattccatctcatcatacgtagaatctggaagcaccaaaaatgaaagaaat
gaggaaaactgtagtagtactcctgaaacaaaactgaccaaacccttgtcagagggaaat
ttggtatatgtagtagcaagcaatgactcctttacaacagtgtcttataaagcaaagaga
acttcctcaagcaagcgggaaccaccttgggtgttcaaggttctcaagtgcatcaaccca
gcagagagtgagaaaggattaatatcttggttagggccttgggtgagggatagctccagg
aagctcagaaaaagcagtggcccacatgaaacaaagatgccagatctgccatggcaaatt
agtggaggaagggatcaaaaggctcagagtagtgggcatgctggaataggtttacatata
aacctggaaaatcctgtaggtgaccatgttcaactccagatacttctgagtttaagggaa
ataaattcagaattgaatctcagtcagtacaacattatcaagttccctcttgacagcatc
tttctcccaggaatgacacaagatgaagatgagttggggtga

>gi568815590r:86114416_86330277|GENSCAN_predicted_peptide_4|55_aa
XPLAADWMVFTHTERGSSSPTPPSQMSVSSGNTLTNTPRYNISHLGIPQSNQVDA

>gi568815590r:86114416_86330277|GENSCAN_predicted_CDS_4|168_bp
ncaccactggcagctgattggatggtgttcacccacactgagcgtgggtcttcctctccc
actccaccaagtcaaatgtcagtctcctctggcaacaccctcacaaacacacccagatac
aatatcagtcatctaggcatccctcaatccaatcaagtggatgcctaa