GENSCAN 1.0	Date run:  8-Nov-116	Time: 17:13:18

Sequence gi568815590r:65619293_65888941 : 269649 bp : 39.57% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   3062   2971   92  2  2   86  100    94 0.146   8.27
 1.01 Init -   8085   7924  162  0  0   88   89   220 0.903  21.88
 1.00 Prom -  19990  19951   40                              -5.05

 2.05 PlyA -  20434  20429    6                               1.05
 2.04 Term -  25572  25296  277  2  1   94   54   223 0.687  13.45
 2.03 Intr -  25952  25808  145  0  1    7   58   126 0.249  -0.08
 2.02 Intr -  59826  59754   73  0  1   80   77    54 0.414   1.56
 2.01 Init -  63620  63507  114  2  0   62   70    72 0.510   3.06
 2.00 Prom -  70524  70485   40                              -3.45

 3.00 Prom +  73514  73553   40                              -6.55
 3.01 Init +  75819  75916   98  2  2   48   52    68 0.179  -0.97
 3.02 Intr +  85402  85637  236  1  2  126   62   268 0.968  24.41
 3.03 Intr +  87718  87964  247  2  1  107   78   229 0.887  19.40
 3.04 Intr +  88551  88719  169  0  1   52   97   271 0.896  23.43
 3.05 Term +  89684  89752   69  1  0   93   38    56 0.856  -1.94
 3.06 PlyA +  91237  91242    6                               1.05

 4.04 PlyA -  91261  91256    6                               1.05
 4.03 Term -  97344  97114  231  0  0   94   39   117 0.061   2.89
 4.02 Intr - 108009 107878  132  0  0   65   96    47 0.090   3.12
 4.01 Init - 115600 115502   99  1  0   50  116   125 0.894  11.81
 4.00 Prom - 116752 116713   40                              -3.65

 5.05 PlyA - 118902 118897    6                               1.05
 5.04 Term - 120305 120294   12  2  0  138   39     3 0.008  -2.37
 5.03 Intr - 128511 128360  152  1  2  100   93    77 0.173   8.36
 5.02 Intr - 160511 160428   84  0  0   72   93    55 0.324   3.27
 5.01 Init - 176206 176077  130  1  1   77   82    64 0.182   5.06
 5.00 Prom - 194900 194861   40                              -4.25

 6.00 Prom + 202165 202204   40                              -4.85
 6.01 Init + 204981 205150  170  2  2   91  -11   119 0.017   1.35
 6.02 Intr + 222462 222821  360  0  0   40  -16   343 0.173  12.51
 6.03 Intr + 223138 223476  339  1  0   24   44   203 0.173   3.16
 6.04 Intr + 225449 225585  137  2  2  106   85    37 0.347   4.49
 6.05 Intr + 245424 245917  494  1  2   63   31   284 0.231  11.99
 6.06 Intr + 246123 246526  404  2  2   32   53   228 0.460   6.00
 6.07 Intr + 248614 248803  190  1  1   48   68   106 0.482   3.27
 6.08 Intr + 248883 248931   49  2  1   98   80    19 0.564  -0.57
 6.09 Intr + 249073 249175  103  2  1   73   82    49 0.455   1.11
 6.10 Term + 249246 249576  331  0  1   78   53   126 0.218   1.24
 6.11 PlyA + 250573 250578    6                               1.05

 7.03 PlyA - 251795 251790    6                               1.05
 7.02 Term - 252693 252509  185  1  2   39   42   191 0.304   6.32
 7.01 Intr - 255501 255449   53  2  2   73   74    58 0.020   0.53

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  41194  41058  137  2  2   93   40    92 0.837   2.10
S.002 Init + 119613 119736  124  2  1   58   86    54 0.875   2.61
S.003 Term + 121639 121745  107  2  2  125   32    88 0.886   4.49
S.004 Sngl + 204981 205196  216  2  0   91   42   143 0.849   4.92


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:65619293_65888941|GENSCAN_predicted_peptide_1|85_aa
MSEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHPNPPVVHSALLALRYLA
ECRANREKMKGELGMMLSLQNVIQN

>gi568815590r:65619293_65888941|GENSCAN_predicted_CDS_1|255_bp
atgagtgaagagcctgacgctctatcggtagttaaccagttacgggatctagcagcagat
ccgttaaacagaagagccatcgtccaggatcagggatgtctgcctggccttattttattt
atggaccatcccaaccctccagtcgtccactccgctttgcttgctcttcgatacttggca
gaatgccgtgcaaacagagaaaagatgaaaggagaactgggtatgatgttgagcttacaa
aatgttatacagaan

>gi568815590r:65619293_65888941|GENSCAN_predicted_peptide_2|202_aa
MDPIINADLETNDGKQLIWHPQRSKNKAGEQSGYPKRKQAKVLSGDEEDKKLTKKNLERI
CQGRLAVHPRSPAPEPVKGAAPKGAAAKGGLPRTAAWRPAREPGVRKMDRRASHRRQACS
RLHHPLANRFSEFPPYSPRPRGSQHPLRLLRLLAWLSRGVAANQPIPAPSLSQADQSAVS
SGSEAGTRSSAEDAATAPQAGC

>gi568815590r:65619293_65888941|GENSCAN_predicted_CDS_2|609_bp
atggatcctataattaatgctgatcttgaaaccaatgacggaaagcaacttatatggcat
ccacagagatctaaaaataaagcaggggaacagagtggctatccaaagaggaagcaagca
aaggtcttgtctggagatgaagaggacaaaaagctcacaaagaaaaatttagaaaggatt
tgccaaggccggctggcggtgcacccgcgcagtccggctcctgagcccgttaagggcgca
gcacccaagggagccgccgcgaagggcggtctccccaggaccgccgcctggcggccggcg
cgggaaccgggggtccgaaagatggaccgaagggcatcccatcgccgtcaggcctgcagc
cgacttcatcacccgctagccaaccgcttttccgagttcccaccctactcacctcggccg
cgcggcagccagcaccctctccggctcctcaggcttctagcttggctgtcccgtggcgtt
gctgccaatcagccaatccccgccccaagcctgagccaggctgatcaatcagctgtttcc
tcaggctcggaggcgggcacaagaagctcggcagaggacgcggcaaccgctccgcaagcc
ggctgctga

>gi568815590r:65619293_65888941|GENSCAN_predicted_peptide_3|272_aa
MKNRKEPDQEIDQLGDDQNLTELRNWQKRFKAKTEVRSRPPLQDDLLFFEKAPSRQISLP
DLSQEEPQLKTPALANEEALQKICALENELAALRAQIAKIVTQQEQQNLTAGDLDSTTFG
TIPPHPPPPPPPLPPPALGLHQSTSAVDLIKERREKRANAGKTLVKNNPKKPEMPNMLEI
LKEMNSVKLRSVKRSEQDVKPKPVDATDPAALIAEALKKKFAYRYRSDSQDEVEKGIPKS
ESEATSERVLFGPHMLKPTGKMKALIENVSDS

>gi568815590r:65619293_65888941|GENSCAN_predicted_CDS_3|819_bp
atgaagaatagaaaagagccagaccaagaaatagaccaactaggagatgatcagaattta
actgaattaagaaactggcagaagaggttcaaagccaagacagaggtcagatcaaggcca
ccccttcaggatgaccttcttttctttgagaaggccccaagcagacagatttccttacca
gacttgtctcaagaagagcctcagctgaagaccccagcgctggcaaatgaggaagcactg
cagaagatttgcgctctcgaaaatgaacttgctgctctcagagctcagattgccaaaatt
gtgacccagcaggagcagcaaaatctcactgcaggtgacttagattctaccacatttggt
accataccaccacaccctccacctcccccaccgcccctgcctccccctgcactggggctc
caccaaagtacatctgctgttgatctgattaaagaacgaagagagaaaagagccaatgct
ggaaagactttggttaagaacaatccaaagaaacctgaaatgccaaatatgctagagatc
cttaaagagatgaacagtgtaaaacttcggtcagtgaagaggtcagagcaagatgtgaag
cccaagccagtggatgctactgaccctgctgccctcatagcagaggctctgaaaaagaaa
tttgcttatcggtatcgaagtgatagccaagatgaagttgaaaaaggaattccaaagtct
gaatcagaggccacctcagagagagtgttgtttgggccacacatgttgaagccaacagga
aaaatgaaggctttaattgaaaatgtatcagactcctaa

>gi568815590r:65619293_65888941|GENSCAN_predicted_peptide_4|153_aa
MIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDILLSLIAAATHDLDHPGV
NQPFLIKTNHYLATLYKANLPGKPNYEQLVSMDSEQGKQVASCTHVPLGAQKTHVFCDIH
VCGPGYPLPLEGARDSLPVVASLHQLLIGTCIK

>gi568815590r:65619293_65888941|GENSCAN_predicted_CDS_4|462_bp
atgattcaagaagattaccacagtcaaaatccttaccataacgcagtccacgctgcggat
gttactcaggccatgcactgttacttaaaggaacctaagcttgccaattctgtaactcct
tgggatatcttgctgagcttaattgcagctgccactcatgatctggatcatccaggtgtt
aatcaacctttccttattaaaactaaccattacttggcaactttatacaaggcaaatctt
cctgggaagccaaattatgagcagctggtgagcatggattctgagcaagggaagcaagtt
gcctcgtgcacccatgtccctttgggtgcacagaagacccatgtcttctgtgatattcat
gtttgtggaccagggtaccctcttcccctggaaggtgctagagattctctgccagtagtt
gcttctctacatcagcttctgattggcacatgcattaaataa

>gi568815590r:65619293_65888941|GENSCAN_predicted_peptide_5|125_aa
MESNPTHTQLSIQPKIQGDPPSDFWSSLSSQLPPLWHSALQIPGDVRVRSRAGFESERRG
SHPYIDFRIFHSQSEIEVSVSARNIRRLLSFQRYLRSSRFFRGTAVSNSLNILDDDYNGQ
AKEIV

>gi568815590r:65619293_65888941|GENSCAN_predicted_CDS_5|378_bp
atggagtctaatcctacacatactcagcttagtattcagccaaagattcaaggggatcca
ccatcagacttctggagctccttgtcctcacagctccctcctctctggcattcagccctg
caaattccaggagatgtacgtgtaaggagccgagcaggatttgaatcagaaagaagaggt
tctcacccatatattgattttcgtattttccactctcaatctgaaattgaagtgtctgtc
tctgcaaggaatatcagaaggctactaagtttccagcgatatcttagatcttcacgcttt
tttcgtggtactgcggtttcaaattccctaaacattttagatgatgattataatggacaa
gccaaggaaatagtctag

>gi568815590r:65619293_65888941|GENSCAN_predicted_peptide_6|858_aa
MKLVHITLKFNQEFLLTDEQRKWFPELKFTPGEDAVNTAEMTTKNSGCYINLVDKAGRGG
TGCKRGQHRQSRKGNPAALGLLGREEQVPGLQSSSAARTEQSSARKDSWSQRPDPGRAGL
RSSDQLGPPPPPPPPPPESCSSPPPEPDFTPPPARARRNSHFAAADLAPTTAAATVTGGV
PACRPQKPKAPGAVAVLSPDRGVTAGFSLLEFPFMGFARDRCGSDVSGPREHRPPGYVTA
SPSVGPGSSARLADAAPGPSRARGAERGAENSEVRRGPGDKGKKPRLRKKPPCHQFSNHI
PSEVQTIYPSSQILLMNQYRPPHVAIPLSRQNEQPGAIFGPWPTLTSASVLECPLQEVAG
TDGIVSVHVPFSLTDFSQINKRLGSFPEDPTFYIREFQYLTQSYEQTWHDLYVILSSTLT
PEHQDHIWTLAQAHADTIHHQAPVRPTGAEVVPNEDPHWDYQDGSPGHHHQDHMIVCLLA
GLKKGALKQSTMKNFQKSPKPSKSSTIMMKKAKGKNRQSFKCLPPPSGALQAHRAAAPHR
SLLDIHLHLAPVSSAAMKATGPDNAQTQVSPPGRAPSTEDPTGSQTVGGPHKDRPHPFLS
QPNPPTQISSALPLKTDGALERTPQQLPSLPLSQGALTLIHLERMRFPNYKNTPVINGSL
ISKLLQATRLPQKVAIIHCRGHQTPDNPISAGNALADQKKRRTSEPQTFKSKDHAVFEKS
PSPALSAIQCHPRSPSGHGLFLPTKPRASLCLYFLWVVEVFPTTSEVANVVTQTLTMHIL
PRFGLQTSIQSDNGPAFISQITQGVSTSLGIKWVLHTPYRPQSSGKVEKINSVLKAQLTK
LALETCQSWTKKISFSPS

>gi568815590r:65619293_65888941|GENSCAN_predicted_CDS_6|2577_bp
atgaaacttgtccacataacactcaaatttaatcaggaattccttcttactgatgagcaa
agaaagtggtttccggagttgaaatttactcctggtgaagatgctgtgaacactgctgaa
atgacaacaaagaattcaggatgttacataaacttggttgataaagcagggcgagggggg
acggggtgcaagcggggccagcacaggcaaagtcggaaagggaaccccgccgccctgggg
ctcctcggccgagaggagcaggtacccggactgcagagttcgagcgcagcacgaacggag
caaagcagtgcaagaaaagacagctggagccagcggccagacccagggcgcgcgggactc
aggagcagcgaccagctcgggccgccgccgccgccgccgccgccgccgccggagtcctgc
tcctcccctcccccggagcctgacttcactccgccgccggcgcgagcccggcgtaattca
cactttgcagccgcggaccttgcgccaaccacggctgccgccaccgtgacaggcggcgtt
ccggcctgccgaccccagaaacccaaagcacccggcgcagtcgccgtcctcagccctgac
cgcggggtcactgctggcttttccctccttgaattcccattcatgggtttcgctagagac
cgctgcggcagtgacgtcagcgggccgcgcgagcaccgtcctcctggctacgtcactgcc
agtccctcggtggggccaggctccagcgctcgcctggcagatgcggccccggggccatcc
cgagcccgaggggcggagaggggagccgagaattcggaagtgagaaggggacccggagac
aaagggaaaaaaccaagactgagaaagaaacctccttgtcaccagttttctaatcatatt
ccttccgaggtccaaaccatctatccaagcagtcagatactgctcatgaatcagtataga
cctccacatgtagctattcccctttccagacaaaatgaacaaccaggcgccatcttcggc
ccatggcccacccttacttcagcatctgtgctagagtgcccccttcaggaagtagcagga
actgacggtattgttagcgttcatgttcccttctccctcactgatttctctcaaattaac
aaaagacttggttcatttccagaagaccctaccttttatattagagagtttcaatacctc
acccagtcttatgaacaaacttggcatgacctctacgttatcctctcttccaccctcacc
ccagaacaccaggaccatatctggaccctagctcaggcacatgctgatacaattcatcac
caagctcctgtccggcctactggtgcagaggtagtccctaacgaggacccccactgggat
tatcaagacgggtcccctggacaccaccatcaagaccacatgattgtgtgtctccttgca
ggactcaaaaagggtgccctaaagcagtcaactatgaaaaactttcagaaatcacccaag
ccttcaaagtcttcaacaatcatgatgaagaaagcaaaaggcaaaaacaggcagagtttc
aaatgcttgcctccgccatcaggggccctgcaggctcacagggctgcagctccacacaga
agcctcctagacatccacctccacctggcgcctgtttcaagtgcggcaatgaaggccact
ggtccagacaatgcccaaacccaggtaagcccaccaggccgtgccccctctacagaagac
cccactggaagtcagactgtgggtggcccccacaaggaccgcccccatcccttcctgagc
cagccaaatcctcctactcagatctcatcagccttgccactgaagactgacggtgccctg
gaacggacgccccagcaactaccatctcttcctctgagccaaggtgctctcacactcatc
catctggaaagaatgaggttccctaactacaaaaacactcctgtcataaatggctctctc
atcagcaaactccttcaagctaccaggctcccacagaaagttgccatcattcattgcagg
ggccaccaaaccccagacaatcctatatcagcaggaaatgcgctagcagatcagaagaaa
aggaggacttctgagccccaaaccttcaaaagcaaagaccatgccgtgttcgagaaatca
cccagtcctgctctatctgccattcagtgtcatcccaggtctccctctggccacggcctt
ttcctacccaccaagcccagggccagtctttgtctgtactttctctgggtggtagaagtg
ttcccaacaacttcagaagttgcaaatgtcgtcacacaaactctcaccatgcatatactt
ccccgctttggactccaaacatccatccagtctgataacgggcccgccttcatcagtcaa
attactcaaggtgtctctacatcattaggtataaaatgggttctccacacaccctacagg
cctcaatcttcaggcaaagttgaaaaaattaactctgtccttaaagcccaactcaccaag
ctggctctagaaacttgccagtcatggacaaaaaaaatctccttttcgccctcatga

>gi568815590r:65619293_65888941|GENSCAN_predicted_peptide_7|79_aa
XGVSSGALKKQATPSATGVRSKGTLNGSKQVHYQIKSNPGLSPVSGTFKPYLDQKFAQRN
WESLKQKSMEIQNPREDLP

>gi568815590r:65619293_65888941|GENSCAN_predicted_CDS_7|240_bp
nnaggtgtgagctctggggcactgaagaagcaagccactccctctgccacaggggtcaga
agtaaggggactttaaatggatccaagcaagttcattaccagatcaaatccaatcctggc
ctcagtccagtttctgggactttcaaaccctacttggatcagaaatttgctcagagaaac
tgggagagcttaaaacagaaatccatggagattcagaatccgagagaagacttaccatga