GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:09:33

Sequence gi568815591r:131404314_131656359 : 252046 bp : 44.62% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6993   7070   78  1  0   89  121    37 0.627   6.62
 1.02 Intr +  10311  10397   87  1  0   51  109    27 0.205   1.04
 1.03 Intr +  31207  31310  104  2  2   51  111   -11 0.164  -2.61
 1.04 Intr +  33472  33684  213  0  0  115   36   129 0.128   9.31
 1.05 Intr +  39168  39389  222  2  0   68   52    75 0.001   0.22
 1.06 Intr +  41461  41590  130  0  1  130   82    69 0.002  10.77
 1.07 Intr +  58904  59051  148  0  1   80   87    77 0.499   6.09
 1.08 Intr +  66529  66631  103  1  1   91   88    35 0.718   3.98
 1.09 Intr +  74310  74364   55  2  1   79  106    -3 0.024  -0.85
 1.10 Term +  83294  83415  122  0  2   65   36   100 0.061   1.14
 1.11 PlyA +  83620  83625    6                               1.05

 2.00 Prom +  83697  83736   40                              -1.96
 2.01 Init +  93197  93251   55  1  1   71   92    27 0.506   2.85
 2.02 Intr +  93766  93919  154  2  1   83   88    49 0.358   3.53
 2.03 Term +  98123  98147   25  2  1  139   55    30 0.282   2.50
 2.04 PlyA +  98497  98502    6                              -3.44

 3.20 PlyA -  98903  98898    6                              -1.95
 3.19 Term - 100195  99998  198  1  0   81   37   352 0.863  26.80
 3.18 Intr - 101722 101555  168  1  0   93  115   311 0.999  34.44
 3.17 Intr - 102008 101947   62  0  2   99   99   136 0.995  14.25
 3.16 Intr - 102413 102266  148  2  1   75   79   213 0.999  18.91
 3.15 Intr - 104781 104638  144  0  0   43   56   113 0.809   4.08
 3.14 Intr - 105272 105052  221  0  2   50   28   100 0.688  -1.78
 3.13 Intr - 107120 106515  606  0  0   77  102   453 0.057  38.02
 3.12 Intr - 129903 129754  150  1  0  114   90     4 0.294   3.33
 3.11 Intr - 132223 132135   89  0  2   76   50    61 0.222   0.71
 3.10 Intr - 133797 133506  292  1  1  120   58   112 0.342   7.59
 3.09 Intr - 137075 136953  123  0  0   68   76    56 0.756   2.96
 3.08 Intr - 139764 139635  130  0  1   90   57    84 0.662   5.77
 3.07 Intr - 145540 145447   94  0  1  118   39    -8 0.141  -2.73
 3.06 Intr - 149693 149564  130  0  1   81  115    -7 0.684   1.05
 3.05 Intr - 152142 151947  196  0  1   35  101   223 0.007  17.29
 3.04 Intr - 157976 157852  125  0  2  117   59    85 0.382   8.80
 3.03 Intr - 170475 170427   49  0  1   60  103    50 0.241   1.95
 3.02 Intr - 173539 173434  106  0  1   40   86    86 0.126   3.82
 3.01 Init - 177664 177645   20  1  2  105   64    40 0.203   1.37
 3.00 Prom - 183692 183653   40                              -4.66

 4.00 Prom + 185328 185367   40                              -6.06
 4.01 Init + 196609 196720  112  0  1   43   60    56 0.383  -1.32
 4.02 Term + 198117 198424  308  1  2  103   38   192 0.657  10.98
 4.03 PlyA + 199560 199565    6                              -0.45

 5.03 PlyA - 200417 200412    6                               1.05
 5.02 Term - 201065 200889  177  2  0   19   51   145 0.801   1.59
 5.01 Init - 203716 203636   81  1  0   67   53   121 0.372   5.65
 5.00 Prom - 208344 208305   40                              -4.06

 6.07 PlyA - 211055 211050    6                               1.05
 6.06 Term - 215088 214976  113  1  2  111   55    25 0.105   0.22
 6.05 Intr - 216070 215967  104  0  2   81   48    54 0.106   0.52
 6.04 Intr - 225657 225607   51  2  0  118   44    69 0.127   3.52
 6.03 Intr - 233148 233041  108  2  0   94   53    58 0.258   2.30
 6.02 Intr - 245744 245645  100  0  1   72   62    67 0.185   1.67
 6.01 Intr - 251631 251442  190  0  1   81   72    52 0.251   2.06

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 107055 106515  541  0  1   98  102   412 0.940  38.64
S.002 Init - 152046 151947  100  0  1   82  101   283 0.849  27.42


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:131404314_131656359|GENSCAN_predicted_peptide_1|420_aa
XGLFNQYISQQEYKPRWSQIIPKSTKETIISSKGDGEDNRPGMRGGHQMVIDVQTVLDII
YQCRYVGNYEFSFSVCVIPSDFPLSSHVILNGPSARSCHKMCIDIQRRQIYTLGRYLDSS
VRNSKSLKSDFYRYDIDTNTWMLLSEDTAADGGPKLVFDHQMCMDSEKHMIYTFGGRILT
CNGSVDDSRASEPQFSGLFAFNCQCQTWKLLREDSCNAGPEDIQSRIGHCMLFHSKNRCL
YVFGGQRSKTYLNDFFSYDVDSDHVDIISDGTKKDSGMVPMTGFTQRATIDPELNEIHVL
SGLSKDKEKREENVRNSFWIYDIVRNSWFEEKAQVDPLSALKYLQNDLYITVDHSDPEET
KEFQLLASALFKSGSDFTALGFSDVDHTYAQRTQLFDTLVNFFPDSMTPPKGNLVDLITL

>gi568815591r:131404314_131656359|GENSCAN_predicted_CDS_1|1263_bp
natggcttgttcaatcagtatatcagtcaacaggaatataagccacgatggagtcaaatc
attcccaaaagtaccaaagaaactattatttcttctaaaggtgatggggaagataaccgt
ccaggaatgagaggaggccatcagatggttattgatgttcaaacagtgcttgatataatt
taccagtgtagatatgtgggcaattatgaattcagtttttcagtatgtgtaattccttca
gattttcctctttcatctcatgtcatcttgaatggtcctagtgccagatcgtgtcataaa
atgtgcattgatattcaacggaggcaaatctacacattggggcgttacttggattcctct
gtgaggaacagcaaatctctgaaaagtgacttctatcgttatgacattgatacaaacaca
tggatgttactaagtgaggatactgctgctgatggagggccgaaattggtgtttgatcat
cagatgtgtatggactcagaaaaacatatgatctacacttttggtggtagaattttgact
tgtaatggcagcgtagatgacagcagagccagtgaaccacaattcagtggcttgtttgct
ttcaactgtcaatgtcaaacctggaaacttcttcgagaggactcctgtaatgctgggcct
gaggacatccagtctcgaataggacactgcatgttattccactcaaaaaatcgttgctta
tatgtatttggtggccagcgatcaaagacctatttgaatgatttctttagttatgatgtg
gactctgatcatgtagacataatatcagatggcaccaagaaagactctgggatggttcca
atgacaggatttacacagagagcaactattgatccagaactgaatgaaatacacgtctta
tctggactcagcaaagataaggaaaagagggaagaaaatgttagaaattcattctggatt
tatgacattgtgaggaatagttggtttgaagaaaaggcccaagtggatccccttagtgct
ctgaaatatttacaaaatgatctttatataactgtggatcattcagacccagaagagaca
aaagagtttcagctcctggcatcagctctattcaaatctggttcagattttacagctctg
ggcttttctgatgtggatcacacctatgctcaaagaactcagctctttgacaccttagta
aatttctttcctgacagcatgactcctcctaaaggcaacctggtagacctcatcacactg
taa

>gi568815591r:131404314_131656359|GENSCAN_predicted_peptide_2|77_aa
MQDTTLDIFVTTFWWEDSTSLLSYGDFFPVGFHPAKAAAVNHILAREILNIGETVIRRNY
VEVACLALRSISDGYRL

>gi568815591r:131404314_131656359|GENSCAN_predicted_CDS_2|234_bp
atgcaggacactacccttgatatatttgtcactaccttctggtgggaagacagcacttca
ctattgtcttacggggacttttttcctgtgggctttcacccagcaaaagcagcagccgtc
aatcatatccttgccagagagattcttaatataggagaaactgtaataaggagaaactac
gtagaagtagcctgcctagcactacgttcgatatcagatggctacagactgtga

>gi568815591r:131404314_131656359|GENSCAN_predicted_peptide_3|1016_aa
MAAQLLGRMITATIKQQQQQHNGSSDNTATAATILALILLHKAFELSMQLHAGKGLYAEY
SWPIIYSHGYNPICLVMVLGSPFPVLTLGLSFTVTDKTSRASPGGAHAPTARTRGSSAGT
AATCSRPRGDDTMRCALALSALLLLLSTPPLLPSSPSPSPSPSQNAYLPIYGQIMQPTAK
KAFTLRVGQFIRPPFSAFWFDNHLAEPQCLIPLGNKPPHTSEDQGVGWHLVHQLSWPEGY
ASVSSSVNEELAQWLSGAFLFSISHGLKLGDFGPRTAGIMGLMATPSHPQVTPNPTSTPL
PTVQKIQAPLSKTTKEIRIVCSVGGPQWALCSLATDVFEVRTHQFPKDRDCDGHGSPIHN
GPKLEAAQMPISSRMDKYIVACAHNRVLHCNGGEQSATAHHEKDELHKAKLSEGSQTQES
RRPDTSCCWPEGVSTILEHTYQVFVGTGFCADQPCLTEKEEPHGSGQTCTHSHLGKACAG
VSGSRGSGGGVEEEVGCAALTATQTTTDSSNKTAPTPASSVTIMATDTAQQSTVPTSKAN
EILASVKATTLGVSSDSPGTTTLAQQVSGPVNTTVARGGGSGNPTTTIESPKSTKSADTT
TVATSTATAKPNTTSSQNGAEDTTNSGGKSSHSVTTDLTSTKAEHLTTPHPTSPLSPRQP
TSTHPVATPTSSGHDHLMKISSSSSTVAIPGYTFTSPGMTTTLPSSVISQRTQQTSSQMP
ASSTAPSSQETVQPTSPATALRTPTLPETMSSSPTAASTTHRYPKTPSPTVAHESNWLGG
NVKDSMTISPNLNLSGFFQAKCEDLETQTQSEKQLVLNLTGNTLCAGGASDEKLISLICR
AVKATFNPAQDKCGIRLASVPGSQTVVVKEITIHTKLPAKDVYERLKDKWDELKEAGVSD
MKLGDQGPPEEAEDRFSMPLIITIVCMASFLLLVAALYGCCHQRLSQRKDQQRLTEELQT
VENGYHDNPTLEVMETSSEMQEKKVVSLNGELGDSWIVPLDNLTKDDLDEEEDTHL

>gi568815591r:131404314_131656359|GENSCAN_predicted_CDS_3|3051_bp
atggcggcacagctcctggggagaatgataacagcaaccataaaacaacaacaacaacaa
cacaacggcagcagcgacaatacagccacagcagcaacaatacttgctctcattcttctt
cataaggcttttgaactctccatgcagctccatgcaggtaaagggctctatgcagaatat
tcctggcccatcatctacagtcatggctacaaccccatctgcttggttatggttctcgga
tctccatttccagtcctgactttaggtctgagctttactgtcacagataaaacttctagg
gcctccccgggcggcgcccacgctcctaccgcccggacgcgcggatcctccgccggcacc
gcagccacctgctcccggcccagaggcgacgacacgatgcgctgcgcgctggcgctctcg
gcgctgctgctactgttgtcaacgccgccgctgctgccgtcgtcgccgtcgccgtcgccg
tcgccctcccagaatgcttaccttccaatatatgggcagattatgcagcctacagcaaag
aaagcattcaccttaagggttggacaattcatcagaccccctttcagtgctttttggttt
gataaccatctggcagaaccacaatgccttattccccttgggaataagccacctcacact
tccgaggaccagggtgtagggtggcacctcgtccaccaattgtcatggccagaaggctat
gcctcagtttcctcatctgtgaatgaggagctggcccagtggctctcaggggccttcctg
tttagtatttcccatggtctaaagctgggtgatttcggccccaggactgctggcatcatg
ggactgatggcaacaccttcccacccccaagtcacccccaaccccacttccactccactc
cctactgtccaaaagatacaggctccactgtcaaaaaccaccaaagaaattcggatcgtg
tgctctgtgggagggccacagtgggccctgtgcagccttgccacagatgtgtttgaagtg
cgtacacatcagtttcccaaagacagggactgcgatggtcacggaagccctattcacaat
ggccctaaactggaagccgcccaaatgcccatcagcagcagaatggacaaatacatagtg
gcatgtgcacacaatagagtcctccactgtaatgggggcgaacagtctgcgaccgcacac
cacgagaaggatgagttacacaaagcaaagctgagtgagggaagccagacccaagagtca
cgacgccctgacaccagctgctgctggcccgagggtgtaagcaccatcctggaacacact
tatcaggtgtttgttgggactgggttctgtgcagatcagccatgcctcactgagaaggaa
gagccacatgggtctgggcagacctgcacccactctcaccttggcaaggcctgtgcaggt
gtgagtggctcgagagggagtggaggaggagtggaggaggaggtgggctgcgcggctcta
acggcaacccagactactacggactcatctaacaaaacagcaccgactccagcatccagt
gtcaccatcatggctacagatacagcccagcagagcacagtccccacttccaaggccaac
gaaatcttggcctcggtcaaggcgaccacccttggtgtatccagtgactcaccggggact
acaaccctggctcagcaagtctcaggcccagtcaacactaccgtggctagaggaggcggc
tcaggcaaccctactaccaccatcgagagccccaagagcacaaaaagtgcagacaccact
acagttgcaacctccacagccacagctaaacctaacaccacaagcagccagaatggagca
gaagatacaacaaactctggggggaaaagcagccacagtgtgaccacagacctcacatcc
actaaggcagaacatctgacgacccctcaccctacaagtccacttagcccccgacaaccc
acttcgacgcatcctgtggccaccccaacaagctcgggacatgaccatcttatgaaaatt
tcaagcagttcaagcactgtggctatccctggctacaccttcacaagcccggggatgacc
accaccctaccgtcatcggttatctcgcaaagaactcaacagacctccagtcagatgcca
gccagctctacggccccttcctcccaggagacagtgcagcccacgagcccggcaacggca
ttgagaacacctaccctgccagagaccatgagctccagccccacagcagcatcaactacc
caccgataccccaaaacaccttctcccactgtggctcatgagagtaactggttgggggga
aatgtcaaagattccatgactattagcccaaaccttaatctcagtggcttcttccaggca
aagtgtgaggatcttgagacacagacacagagtgagaagcagctcgtcctgaacctcaca
ggaaacaccctctgtgcagggggcgcttcggatgagaaattgatctcactgatatgccga
gcagtcaaagccaccttcaacccggcccaagataagtgcggcatacggctggcatctgtt
ccaggaagtcagaccgtggtcgtcaaagaaatcactattcacactaagctccctgccaag
gatgtgtacgagcggctgaaggacaaatgggatgaactaaaggaggcaggggtcagtgac
atgaagctaggggaccaggggccaccggaggaggccgaggaccgcttcagcatgcccctc
atcatcaccatcgtctgcatggcatcattcctgctcctcgtggcggccctctatggctgc
tgccaccagcgcctctcccagaggaaggaccagcagcggctaacagaggagctgcagaca
gtggagaatggttaccatgacaacccaacactggaagtgatggagacctcttctgagatg
caggagaagaaggtggtcagcctcaacggggagctgggggacagctggatcgtccctctg
gacaacctgaccaaggacgacctggatgaggaggaagacacacacctctag

>gi568815591r:131404314_131656359|GENSCAN_predicted_peptide_4|139_aa
MGPNKVAGALWMVHAIQRQRDPGFLDWVLGEELSSRHGPFCFSANHHMGPPGHWLQENLI
GSGNHQLLDTGQPIERQHPGQVPTLGPISCGPTAVGPMVQVVFLKGAAGEPGLAVSTTRK
KRPFQKNSNERAMSSTRDV

>gi568815591r:131404314_131656359|GENSCAN_predicted_CDS_4|420_bp
atgggacccaacaaggtagcaggtgctctgtggatggtccatgctattcaaagacaaaga
gatccaggatttctcgactgggtactaggggaagaactgtcctcacgccatgggccattc
tgcttctctgccaaccaccacatgggtccccctgggcattggctgcaggagaacctgatt
ggctcaggtaatcaccagctcttggacactggccaaccaatagagcggcagcatccaggt
caggtgcccacccttggtccaatcagctgtggcccaactgccgtagggcccatggtgcag
gtggtgtttttaaagggggctgcaggtgagccaggtcttgcggtgtcaactacacgaaaa
aagcgaccctttcagaagaattctaatgagagagccatgtcgtctacccgggacgtgtga

>gi568815591r:131404314_131656359|GENSCAN_predicted_peptide_5|85_aa
MLFYRCHASTRPHACPLATVTLNAASVSSSPRLPGFSGECDSEPGHLGSEDSAGPQANHR
ELRSRTSPDVEKSLAASSDFASREQ

>gi568815591r:131404314_131656359|GENSCAN_predicted_CDS_5|258_bp
atgttgttctaccgatgccacgcatccaccagaccccacgcctgcccgctggccacagtc
acgctcaatgccgcctctgttagcagctctcccagactccctggattctcgggtgaatgt
gacagcgagccaggacacctgggttctgaggactctgcaggacctcaggcaaaccaccgt
gaacttagaagccgcacttctcccgacgtggagaagagtttggctgcatcctctgacttc
gcatcccgggagcagtga

>gi568815591r:131404314_131656359|GENSCAN_predicted_peptide_6|221_aa
SCSRKGATHLASGSFIDRLHQNLRASECEFHTDESEKTGVCIPETLTLKGPHVRRFGDNS
LGSGLKHTQPGIPGRIPVPESSVASTQGAAKTASIPRRSHVHSNGNFPETVALLWLSTLE
DTSPGTKRAMACHLQEEQLQDTVMVSPWRLPSWTPQDKPAEVEGLEGILQDDLAGCKTQQ
QHWVEGEPVWYQKDGGIRTPGSCPFHSPHQLPMREPELSTH

>gi568815591r:131404314_131656359|GENSCAN_predicted_CDS_6|666_bp
tcatgttctagaaaaggggctacacacctggcttccgggagcttcatagaccgattgcat
cagaatctcagagcatcagaatgtgagtttcacacagatgagtctgaaaagaccggtgtg
tgtattcctgaaacactaactcttaaaggcccccatgtcagacgctttggggacaacagc
cttggctcaggcctaaagcacacacagccagggatccccggcaggattccagttccagag
tcctcggtagcatctacccagggagcagccaagacagccagcatccccaggcgctcacat
gttcattccaatggcaactttccagagacagtggccttgctctggttgtccaccttggag
gacacaagtcctggtaccaagagggccatggcctgccacctgcaggaagagcagctgcag
gacacagtgatggtgtctccgtggcgcttgccaagctggactccacaggataaaccagca
gaggtggaagggctggaaggaatcctacaagacgacttggcaggatgcaagacccaacaa
caacactgggttgaaggagagcctgtatggtaccagaaagatgggggaatcagaactcct
gggtcttgcccatttcactctccacatcagctgcccatgcgggaacctgagttgagtacc
cactga