GENSCAN 1.0	Date run:  6-Nov-116	Time: 11:18:24

Sequence gi568815591r:75711799_75913715 : 201917 bp : 48.86% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -  27191  27003  189  2  0   20   94   174 0.036  10.98
 1.04 Intr -  27755  27518  238  1  1   54   62   100 0.014   1.62
 1.03 Intr -  46451  46371   81  1  0   35  105    59 0.062   1.05
 1.02 Intr -  60205  60091  115  2  1   94   76    78 0.193   6.71
 1.01 Init -  60378  60306   73  0  1   80   75   157 0.890  12.83
 1.00 Prom -  63580  63541   40                              -6.26

 2.00 Prom +  64882  64921   40                              -3.16
 2.01 Init +  67600  67657   58  0  1   42  106    28 0.489   1.47
 2.02 Intr +  71487  71621  135  1  0  101   80    30 0.565   4.04
 2.03 Intr +  75380  75525  146  0  2   70   93    46 0.314   3.30
 2.04 Intr +  81776  81901  126  1  0   50  113    11 0.059   0.68
 2.05 Term +  89492  89635  144  1  0   42   42    85 0.143  -2.79
 2.06 PlyA +  89685  89690    6                               1.05

 3.04 PlyA -  91977  91972    6                               1.05
 3.03 Term - 100166  99998  169  1  1  135   36   194 0.999  16.25
 3.02 Intr - 101625 101508  118  1  1  114   45    50 0.995   2.82
 3.01 Init - 101917 101845   73  1  1   78   94    49 0.927   4.89
 3.00 Prom - 101995 101956   40                              -5.76

 4.03 PlyA - 102398 102393    6                               1.05
 4.02 Term - 108398 108210  189  2  0  -17   42   616 0.991  43.95
 4.01 Init - 111660 111589   72  0  0   90  105     5 0.395   1.48
 4.00 Prom - 112411 112372   40                              -6.56

 5.00 Prom + 115159 115198   40                              -4.66
 5.01 Init + 118029 118133  105  2  0   70   16    67 0.212  -2.06
 5.02 Term + 123914 124135  222  1  0   38   42   373 0.942  24.62
 5.03 PlyA + 125110 125115    6                               1.05

 6.03 PlyA - 125926 125921    6                               1.05
 6.02 Term - 126966 126842  125  1  2   32   44   136 0.436   2.15
 6.01 Init - 129828 129810   19  0  1   72   96     7 0.380   0.40
 6.00 Prom - 131793 131754   40                              -3.36

 7.00 Prom + 143820 143859   40                              -2.66
 7.01 Init + 167150 167462  313  1  1   63  105   346 0.947  29.29
 7.02 Intr + 170031 170369  339  1  0   53  -14   436 0.681  25.35
 7.03 Intr + 171876 172050  175  1  1   78  100   163 0.766  15.50
 7.04 Intr + 175848 175929   82  0  1   83   41    56 0.503   0.04
 7.05 Intr + 176708 176962  255  1  0   65   58   103 0.372   2.64
 7.06 Intr + 179088 179203  116  2  2   82   96    28 0.479   2.25
 7.07 Term + 184617 184821  205  0  1   60   48   100 0.328   0.04
 7.08 PlyA + 186086 186091    6                               1.05

 8.00 Prom + 190922 190961   40                              -3.36
 8.01 Init + 195750 195833   84  2  0   41   94    66 0.969   3.32
 8.02 Term + 197741 198127  387  1  0    3   42   329 0.974  14.74
 8.03 PlyA + 198663 198668    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  27122  27003  120  2  0  103   94   156 0.890  17.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:75711799_75913715|GENSCAN_predicted_peptide_1|232_aa
MMGLSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQR
AVMPGVPNPWAMDQYWSICGLLGTGPHSRRAGQSGAPGSQARKELTGYSQAGWDSPGGGP
TARPASSPPISTGRRGIAPCRSGQGSGRRLAEGSTLGARGDCGRGEERAGGAGGAVGIPG
QPRAPDSAPRGDMDRMASSMKQVPNPLPKVLSRRGVGAGLEAAERESFERTQ

>gi568815591r:75711799_75913715|GENSCAN_predicted_CDS_1|696_bp
atgatgggcctctccttggcctctgctgtgctcctggcctccctcctgagtctccacctt
ggaactgccacacgtgggagtgacatatccaagacctgctgcttccaatacagccacaag
ccccttccctggacctgggtgcgaagctatgaattcaccagtaacagctgctcccagcgg
gctgtgatgccaggggtccccaacccctgggccatggaccagtactggtccatctgtggc
ctgttaggaactgggcctcacagcaggagggctggtcagtccggcgctcccgggtcccag
gcccggaaggagctaacgggctattcgcaggcgggctgggattcccccgggggaggcccc
actgcccggcccgcgtcatccccgcccatctccacgggccgtcgcgggatagccccctgc
aggagcgggcagggtagtgggcggcgcttggcggagggcagcacgctcggggcgcgcggg
gactgcggccgaggggaggagagggcgggcggggcgggcggcgccgtggggatcccgggg
cagccgagggcccctgactcggctcctcgcggcgacatggatcggatggccagctccatg
aagcaggtgcccaacccactgcccaaggtgctgagccggcgcggggtcggcgctgggctg
gaggcggcggagcgcgagagcttcgagcggactcag

>gi568815591r:75711799_75913715|GENSCAN_predicted_peptide_2|202_aa
MTSGPQTDQPKEHLTNFKLDEQERVFSLAQSHTDNRRLHEPDLQEVIRAVPLGDPKWNYQ
ADSPDVIPRFGLPTSIQSDNGLAFISQITQAVSQALGIQWKLRTPYHPQSSGKCWDYRHK
SLHPAKCLLNSYSPSNVQGSGDTVVDRTPSLSLRKSSLWYKAPQSRDGDTIGDGKTSGAH
QLGQPNKKRHGYHIISFPDFLS

>gi568815591r:75711799_75913715|GENSCAN_predicted_CDS_2|609_bp
atgacctcaggtcctcagaccgaccagcccaaggaacatctcaccaattttaaattggat
gaacaggaaagagttttttctctagcccaatctcacactgataaccgccggcttcacgag
ccagacctccaggaagttattagagcagttcccctaggagatccaaaatggaactatcag
gctgattccccagacgtaattcctcggtttggccttcccacctctatacagtccgataat
ggactggcctttattagtcaaatcacccaagcagtttctcaggctcttggtattcagtgg
aaacttcgtaccccttaccatcctcaatcttcaggaaagtgctgggattacaggcataag
tcactgcatccagccaaatgtttgctgaattcttacagccccagcaatgtccaaggctct
ggagacaccgtggtggacaggacaccatccctgtccttaagaaagagtagcctttggtat
aaggcaccccagtccagagatggagatactattggcgatgggaaaacatcaggagcacac
caactggggcagcccaataaaaagaggcatggatatcacatcatcagcttccctgacttt
ttatcataa

>gi568815591r:75711799_75913715|GENSCAN_predicted_peptide_3|119_aa
MAGLMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLK
AGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQKKASPRARAVAVKGPVQRYPGNQTTC

>gi568815591r:75711799_75913715|GENSCAN_predicted_CDS_3|360_bp
atggcaggcctgatgaccatagtaaccagccttctgttccttggtgtctgtgcccaccac
atcatccctacgggctctgtggtcatcccctctccctgctgcatgttctttgtttccaag
agaattcctgagaaccgagtggtcagctaccagctgtccagcaggagcacatgcctcaag
gcaggagtgatcttcaccaccaagaagggccagcagttctgtggcgaccccaagcaggag
tgggtccagaggtacatgaagaacctggacgccaagcagaagaaggcttcccctagggcc
agggcagtggctgtcaagggccctgtccagagatatcctggcaaccaaaccacctgctaa

>gi568815591r:75711799_75913715|GENSCAN_predicted_peptide_4|86_aa
MQGRRPSLPRCPSSRPILPAIPDLKEKEKEKEKEKEKEKEEEEEEEKKKKKKKKEEEEEE
EEEEEEEEEEEEEEEEEEEEEEEVVY

>gi568815591r:75711799_75913715|GENSCAN_predicted_CDS_4|261_bp
atgcaggggaggcgcccttccctccccaggtgcccctcctctcgtcccattcttcctgcc
atcccagatctgaaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggag
gaggaggaggaggaggagaagaagaagaagaagaagaagaaggaagaagaagaagaagag
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagtagtttactaa

>gi568815591r:75711799_75913715|GENSCAN_predicted_peptide_5|108_aa
MNSEMTAMPQPPNPPGNQLLFISSGHKGSLWTSWIVLKYQTLIFGNSAEFGTLKKAAVHY
DGSGRSLGSADMRFERKAHALKAMKQYYGTPLAGRPVNIQLVTSQIDT

>gi568815591r:75711799_75913715|GENSCAN_predicted_CDS_5|327_bp
atgaacagtgaaatgacggcgatgccccagccacccaacccccctgggaatcagcttctg
ttcatcagctcaggccacaaaggaagtctttggacaagctggatagttttgaagtatcag
acactgatatttgggaactctgcagaatttggaacgctgaagaaggcggctgtgcactac
gatggctctggccgcagcttaggatcagcagacatgcgctttgagcggaaggcacacgcc
ctgaaggccatgaagcagtactacggcacccctctggctggccgccctgtgaacattcag
cttgtcacatcacagattgatacataa

>gi568815591r:75711799_75913715|GENSCAN_predicted_peptide_6|47_aa
MTLHKAEELLFHGTGPFYIATNNVEYLQIGPLSDIHGKSIHRYTRLQ

>gi568815591r:75711799_75913715|GENSCAN_predicted_CDS_6|144_bp
atgaccctccacaaagcagaggaactgcttttccacggtactggaccattttacatcgcc
accaacaatgtagagtacctgcagataggtcctttgtctgatattcacggcaagtcaata
cacagatacaccaggttgcagtag

>gi568815591r:75711799_75913715|GENSCAN_predicted_peptide_7|494_aa
MGRGLWEAWPPAGSSAVAKGNCREEAEGAEDRQPASRRGAGTTAAMAASGPGCRSWCLCP
EVPSATFFTALLSLLVSGPRLFLLQQPLAPSGLTLKSEALRNWQVYRLVTYIFVYENPIS
LLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGF
TPVAFAMLGVTTVRSRMRRALVFGMVVPSVLVPWLLLVSLNTPTSDGLTYCYSIDLSERV
ALKLDQTFPFSLMRRISVFKYVSGSSAERRAAQSRKIVEPATQALAAVTWSQRSIWFRSC
CEQPCGVRCTGPAYRCRKRDVLPSDKVTWLFSNTDKAPRQGTRGRRGQQLAVAADVCPQL
HHSSLWLCRARGFSVRVSMCLPFRSSQLTGQDPQRPEKLPDIISFPARLAEGSREADSCP
ARSANLRMRKSEVGEKPRCALGTEASARRTIGMYGGFEDSRSDVAQGSAETRPFMSHGRD
KHGDLPQPAVAWMK

>gi568815591r:75711799_75913715|GENSCAN_predicted_CDS_7|1485_bp
atggggcggggcctctgggaggcgtggcctccggccggctcctctgctgttgccaaggga
aactgccgcgaggaggcggaaggagcagaggaccggcagccggcgtcgaggcggggcgcg
ggaacgacggcggccatggcggcctcggggcccgggtgtcgcagctggtgcttgtgtccc
gaggtgccatccgccaccttcttcactgcgctgctctcgctgctggtttccgggcctcgc
ctgttcctgctgcagcagcccctggcgccctcgggcctcacgctgaagtccgaggccctt
cgcaactggcaagtttacaggctggtaacctacatctttgtctacgagaatcccatctcc
ctgctctgcggcgctatcatcatctggcgctttgctggcaatttcgagagaaccgtgggc
accgtccgccactgcttcttcaccgtgatcttcgccatcttctccgctatcatcttcctg
tcattcgaggctgtgtcatcactgtcaaagctgggggaagtggaggatgccagaggtttc
accccagtggcctttgccatgctgggagtcaccaccgtccgttctcggatgaggcgggcc
ctggtgtttggcatggttgtgccctcagtcctggttccgtggctcctgctggtttcactt
aacacgccaacctcagatggcctcacctactgctattccatcgacctctcagagcgagtg
gcactgaagctcgatcagaccttccccttcagcctgatgaggaggatatccgtgttcaag
tacgtctcagggtcttcagccgagaggagggcagcccagagccggaaaattgtcgagcca
gccacacaggcactggcagctgtgacctggtcccaacgctccatctggtttagaagctgc
tgtgagcagccctgtggagtacggtgtactggcccagcttacagatgcagaaagcgagac
gttctgccatcagataaagtcacgtggctctttagtaacacggacaaggctcctcgccaa
ggaactcgtggcagaagagggcagcagttggcagtagctgccgatgtctgtccccagctc
caccattcctccctgtggctgtgccgtgctcgtggtttcagtgtccgtgtgtccatgtgt
ctgcccttcaggagctcgcagctgacagggcaggacccacagcggccagagaagcttcca
gacattatcagtttccctgctcggttggcggagggcagcagagaagcagattcatgccct
gctcgctctgcaaacctcagaatgagaaagagtgaggttggtgagaagccgcgctgtgca
ctgggaacagaagccagtgccaggaggaccatcgggatgtacggaggctttgaggacagt
agatcagatgttgcacagggcagtgctgagaccaggccctttatgtcccatggcagggac
aagcatggagacctcccccaaccagctgtggcatggatgaaatga

>gi568815591r:75711799_75913715|GENSCAN_predicted_peptide_8|156_aa
MLGGPRGVGQQGDRKKVWGSYLDNEESQKRKEKKRRTRRRRRKKKEKKRKRKEEEEEEEE
EEEEGEEGEVGEEREEGEEGKEEGEEKRKEEKKEKRKEEERRRKEEGRGGRGREEEGGGR
RRREKKKEEEEKKVTGQNQPEKHVCTSMAVMTRRKC

>gi568815591r:75711799_75913715|GENSCAN_predicted_CDS_8|471_bp
atgttaggaggacctaggggtgtggggcagcaaggagaccggaagaaggtctggggaagt
tatttggacaatgaagagagccagaaaagaaaagaaaagaaaagaagaacaaggaggagg
aggagaaagaagaaagagaagaagaggaagaggaaggaagaagaagaggaggaagaggaa
gaagaggaagagggagaggagggagaggtgggagaggaaagagaggaaggagaggaagga
aaagaggaaggagaggagaagaggaaggaggagaagaaggagaaaagaaaagaagaagaa
agaagaagaaaagaagaaggaagaggaggaagaggaagagaagaagaaggaggaggaaga
agaagaagagagaagaagaaagaagaagaagaaaagaaagtcacaggtcaaaatcagcca
gaaaaacatgtatgtaccagcatggctgtaatgaccagaagaaaatgctaa