GENSCAN 1.0	Date run:  6-Nov-116	Time: 11:18:52

Sequence gi568815592f:126240274_126446322 : 206049 bp : 36.06% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    156    324  169  1  1   66   39    91 0.157   0.08
 1.02 Term +   2146   2845  700  1  1   75   48   239 0.471  10.62
 1.03 PlyA +   3657   3662    6                               1.05

 2.02 PlyA -   4520   4515    6                               1.05
 2.01 Sngl -  17866  17648  219  1  0   81   55   355 0.975  26.41
 2.00 Prom -  20261  20222   40                              -7.15

 3.03 PlyA -  20391  20386    6                               1.05
 3.02 Term -  21937  21809  129  1  0   76   46   128 0.260   4.60
 3.01 Init -  42558  42319  240  0  0   82   87   119 0.696   9.12
 3.00 Prom -  79375  79336   40                              -4.25

 4.00 Prom +  79394  79433   40                              -5.35
 4.01 Sngl +  87720  88376  657  2  0   71   43   381 0.934  27.82
 4.02 PlyA +  88604  88609    6                               1.05

 5.00 Prom +  88773  88812   40                              -6.15
 5.01 Init +  89723  90491  769  1  1   70   28   263 0.272  13.40
 5.02 Term +  90619  91634 1016  2  2  -20   48   330 0.220   9.47
 5.03 PlyA +  91691  91696    6                              -0.45

 6.00 Prom +  91987  92026   40                              -3.95
 6.01 Init + 100001 100126  126  1  0   82   77   162 0.394  14.71
 6.02 Intr + 105932 106045  114  1  0   77   93    55 0.487   4.62
 6.03 Term + 108193 108219   27  0  0  125   43     2 0.350  -3.50
 6.04 PlyA + 109475 109480    6                               1.05

 7.03 PlyA - 109548 109543    6                               1.05
 7.02 Term - 120673 120453  221  2  2   73   43   152 0.582   5.42
 7.01 Init - 131603 131486  118  2  1   62   72    93 0.714   5.51
 7.00 Prom - 135469 135430   40                              -3.75

 8.00 Prom + 139570 139609   40                              -2.65
 8.01 Sngl + 143637 144068  432  2  0   38   43   210 0.907   7.53
 8.02 PlyA + 144269 144274    6                               1.05

 9.00 Prom + 144382 144421   40                              -0.95
 9.01 Init + 163341 163472  132  2  0   36   98   145 0.784  10.49
 9.02 Intr + 175776 176024  249  2  0  -23   47   249 0.822   6.41
 9.03 Term + 176323 176751  429  0  0   48   41   160 0.853   1.62
 9.04 PlyA + 177663 177668    6                               1.05

10.00 Prom + 177692 177731   40                              -4.85
10.01 Init + 178513 178592   80  0  2   81   47    35 0.022  -0.72
10.02 Intr + 193278 193352   75  0  0   97  113    41 0.735   5.21
10.03 Term + 193871 194030  160  2  1   85   36    86 0.759  -0.47
10.04 PlyA + 194174 194179    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  12989  13080   92  0  2  122   54    83 0.818   5.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:126240274_126446322|GENSCAN_predicted_peptide_1|289_aa
XRTLSWRSLGVCWRSTPDPVCLGISSGGCRTANIGEHLMLLPDCSSGSFVSEEYPAVIGK
NYFKVHMVPKKAHIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRVIDKWNRT
EPSEIMPHIYNYLIFEKPDKNKKWGKDSLFNKWFWENWLAICRKLKLDPFLTPHTKINSR
WTKDLNVRPKNIKTLEENLGNTIQDIGMGKDFMSKTPKAMATKAKIDKWDLTKLKSFCTG
KETTIRVNRQPTEWDKIFAIYSSDKGLISRIYKELKQIYKKKSNDPIKN

>gi568815592f:126240274_126446322|GENSCAN_predicted_CDS_1|870_bp
ntcaggaccctcagctggaggtctcttggagtttgctggaggtccactccagaccctgtt
tgcctgggtatcagcagtggaggctgcagaacagcaaatattggtgaacatctaatgttg
ctgcctgattgttcctctggaagttttgtctcagaggagtacccggccgtaattggaaaa
aactactttaaagttcatatggtaccaaaaaaagcccacattgccaagtcaatcctaagc
caaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggctaca
gtaaccaaaacagcatggtactggtaccaaaacagagttatagacaaatggaacagaaca
gagccctcagaaataatgccacacatctacaactatctgatctttgagaaacctgacaaa
aacaagaaatggggaaaggattccctatttaataaatggttctgggaaaactggttagcc
atatgtagaaagctgaaactggaccccttccttacacctcatacaaaaattaattcaaga
tggactaaagacttaaatgttagacctaaaaacataaaaaccctagaagaaaacctaggc
aataccattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatg
gccacaaaagccaaaattgacaaatgggatctaactaaactaaagagcttctgcacagga
aaagaaactaccatcagagtgaacaggcaacctacagagtgggataaaatttttgctatc
tactcatctgacaaagggctaatatccagaatctacaaagaactcaaacaaatttacaag
aaaaaatcaaacgaccccatcaaaaactag

>gi568815592f:126240274_126446322|GENSCAN_predicted_peptide_2|72_aa
MEQLTQLPDCQEKEIPELEIDVDELLDMESEDAQAARVEELLVDCYKPTEAFIPDLLDKI
RGMQKLSTPQKK

>gi568815592f:126240274_126446322|GENSCAN_predicted_CDS_2|219_bp
atggagcagctgacacaactccccgactgccaggaaaaggagatcccagaactggagatt
gacgtggatgaactcctggacatggagagtgaggatgcccaggctgccagggtcgaggag
ctgctggttgactgttacaaacccaccgaggccttcatccctgacctgctggacaagatc
cggggcatgcagaagctgagcacaccccagaagaagtga

>gi568815592f:126240274_126446322|GENSCAN_predicted_peptide_3|122_aa
MGKDFMTKTPKAMATKAKIDKWDLIKLKSFCTAKETIRVNRQPTECETIFAIYPSDKGLI
SRIYKELKQIYKEKKQPHPKAVASPPLHYTHTESILGLTAGMVEEPSLHTYCCKTSGSTT
PA

>gi568815592f:126240274_126446322|GENSCAN_predicted_CDS_3|369_bp
atgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aagtgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcagagtgaac
aggcaacctacagaatgtgagacaatttttgcaatctatccatctgacaaagggctaata
tccagaatctacaaggaacttaaacaaatttacaaggaaaaaaaacaaccccatccaaaa
gctgttgcaagccctccgctccactacactcacactgaatccattcttggcctgacagct
ggtatggtggaagagccatccttgcacacatactgctgcaaaacttcaggttccactaca
ccagcatga

>gi568815592f:126240274_126446322|GENSCAN_predicted_peptide_4|218_aa
MEDEMNEMKREGKFKEKRIKRNEQSLQEIWDHVKRPNLRLIAVSESDRENGTKLENTLQD
IIQENFLNLARQAKIQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKENMLRAAREKGQV
THKGKPTRLTADLSAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDK
QMLRDFVTTRPALKELLKEALNMERNNRYQPLQNHAKM

>gi568815592f:126240274_126446322|GENSCAN_predicted_CDS_4|657_bp
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttaaagaaaaaagaataaaa
agaaatgaacaaagcctccaagaaatatgggaccatgtgaaaagaccaaatctacgtctg
attgctgtatctgaaagtgacagggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttcctcaatctagcaaggcaggccaaaattcagattcaggaaata
cagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaatatgttaagggcagccagagagaaaggtcaggtt
acccacaaagggaagcccaccagactaacagctgatctctcggcagaaactctgcaagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaag
caaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagca
ctaaacatggaaaggaacaaccggtaccagccgctgcaaaatcatgccaaaatgtaa

>gi568815592f:126240274_126446322|GENSCAN_predicted_peptide_5|594_aa
MDKFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFIAEFYQRYKEEL
VPFLVKLFQSIEKEGILPNSFYEASIILIPKLGRDRTKKENFGPISLMNIDAKFLNKILA
NQIQQHIKKLIHHDQVGFIPGMQGWYNIRKSINVIQHINRTKDKNHISIDAEKAFDKIQQ
LFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFDI
VLEVLARAIRQEKEIKGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIHL
TRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVERINIVKMAILPKVICRFNAIPIKLP
MTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQN
RDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLGIYRKLKLDPCL
TPYTKTNSRWIKDLNIRPKTIKTLEENLGITIQDIGTGKGFMSKTPKAMATKAKIDKWDL
IKLKSFCTAKETTIRVNRQPTKWEKIFVTYSSDKGLISRIYNELKQIYKKKTTP

>gi568815592f:126240274_126446322|GENSCAN_predicted_CDS_5|1785_bp
atggataaattccttgacacatacaccctcccaagattaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcatagccgaattctaccagaggtacaaggaggaactg
gtaccattccttgtgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaagctgggcagagacagaaccaaaaaagag
aattttggaccaatatccttgatgaacattgatgcaaaattcctcaataaaatactggca
aaccaaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
ggaatgcaaggctggtacaatatacgcaaatcaataaatgtaatccagcatataaacaga
accaaagacaaaaaccacatctcaatagatgcagaaaaggcctttgacaaaattcaacaa
ctcttcatgctaaaaactctcaataaattaggtattgatgggacgtatctcaaaataata
agagctatctatgacaaacccacagccaatatcatactgaatgggcaaaagctggaagca
ttccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcgacata
gtgttggaagttctggccagggcaattaggcaggagaaggaaataaagggatacaaaatc
aatgtacaaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatc
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccacctt
acaagggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggacacaaacaaatggaagaacattccatgttcatgggtagaaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttgtagattcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttgaagttcatatggaaccaaaaaaga
gcccgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agagatatagatcaatggaaccgaacagagccctcagaaataacgccgcatatctacaac
tatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaat
aaatggtgctgggaaaactggctaggcatatatagaaagctgaagctggatccctgcctt
acaccttatacaaaaactaattcaagatggattaaagacttaaacattagacctaaaacc
ataaaaaccctagaagaaaatctaggcattaccattcaggacataggcacgggcaagggc
ttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacct
acaaaatgggagaaaattttcgtaacctactcatctgacaaagggctaatatccagaatc
tacaatgaactcaaacaaatttacaagaaaaaaacaaccccatga

>gi568815592f:126240274_126446322|GENSCAN_predicted_peptide_6|88_aa
MALSTIVSQRKQIKRKAPRGFLKRVFKRKKPQLRLEKSGDLLVHLNCLLFVHRLAEESRT
NACASKCRVINKEHVLAAAKVILKKSRG

>gi568815592f:126240274_126446322|GENSCAN_predicted_CDS_6|267_bp
atggcgctgtcgaccatagtctcccagaggaagcagataaagcggaaggctccccgtggc
tttctaaagcgagtcttcaagcgaaagaagcctcaacttcgtctggagaaaagtggtgac
ttattggtccatctgaactgtttactgtttgttcatcgattagcagaagagtccaggaca
aacgcttgtgcgagtaaatgtagagtcattaacaaggagcatgtactggccgcagcaaag
gtaattctaaagaagagcagaggttag

>gi568815592f:126240274_126446322|GENSCAN_predicted_peptide_7|112_aa
MNIFTHITRKPRGDKKFLEIYNACRLNQEEIETLNGPITGMVHNQIEMTKMTHTEFRIWM
AKKLIEIYQKVETQSKESSKMIQELKDEITIIRKKQTDLLELKIHYGNFIIQ

>gi568815592f:126240274_126446322|GENSCAN_predicted_CDS_7|339_bp
atgaacatctttacgcacataactagaaaacctagaggagataagaaattcttggaaata
tacaacgcttgtagattaaaccaggaagaaatagaaacgctgaacggaccaataacagga
atggttcataaccagattgaaatgaccaaaatgacacacacagaattcagaatctggatg
gcaaagaagctcattgagatttatcagaaagttgagacccaatccaaggaatccagtaaa
atgatccaagagctgaaagatgaaataaccattataagaaagaaacaaactgaccttctg
gaactaaaaattcactatggaaatttcataatacaatag

>gi568815592f:126240274_126446322|GENSCAN_predicted_peptide_8|143_aa
MDLIDIYRATEYRFFSGAHETYSEIDHTIRHKTILSKCRRTEVIAITLLDHSAIKIEFKT
KKITQNHVITSKLNNLLLSDFQVNNEIKAEIKKFVETNESKDTAYQNFWDTAKAVLRGKF
VALLKNLYGTKKESNSEGHHKQR

>gi568815592f:126240274_126446322|GENSCAN_predicted_CDS_8|432_bp
atggacctgatagacatctacagagcaacagaatatagattcttctctggtgcacatgaa
acatactctgaaattgatcacacaatcagacataaaacaatcctcagcaaatgcagaaga
actgaggtcatagcaatcactctcttggaccacagtgcaataaaaatagaattcaagacg
aagaaaatcactcaaaaccatgtaattacatcaaaattgaacaacctgctcctgagtgac
tttcaagttaataatgaaattaaggcagaaatcaagaagttcgttgaaactaatgagagc
aaagatacagcataccagaatttctgggacacagccaaggcagtgttaagagggaaattt
gtagcacttttaaaaaatttatatggaaccaaaaaagagtctaatagcgaaggccatcat
aagcaaagatag

>gi568815592f:126240274_126446322|GENSCAN_predicted_peptide_9|269_aa
MRFKEIRHLCNIKVQDETVSADIEAKVQDETVSADIEAKIQDETRLVEWFDQYADNDTDN
EIQAEVVSDGNEKLVGNWNKGDDSSYVLAKRLAAFCLCSRDLWNVEIERDDLGYLVEEIS
KQQSIREPRDLVPCVPAAPSMAERGQCRGQAMASEGASLKPWQIPCGVEPASAQKSRIGI
WEPSPRFQRMYGNAWMSRQKFAAGSGVSWRTSARAVQKGNMGLEPTHRVLTGALPSGTVR
RRPPSSRPQNCRSNDSLHCAPGKATDTQC

>gi568815592f:126240274_126446322|GENSCAN_predicted_CDS_9|810_bp
atgaggtttaaggaaataagacatctctgtaacataaaagtacaagatgaaacagtaagt
gctgatatagaagctaaagtacaagatgaaacagtaagtgctgatatagaagctaaaata
caagatgaaacaagacttgttgaatggtttgaccaatatgctgataatgatacggacaat
gaaatccaggctgaggtggtctcagatggaaatgagaaacttgttgggaactggaacaaa
ggtgatgactcttcttatgttttagcaaagagactggcagcattttgcctgtgctctagg
gatttatggaacgttgaaattgagagagatgatttagggtatctggtggaagaaatttct
aagcagcaaagcattcgagagcctagggacttggtgccctgtgtcccagctgctccatcc
atggctgaaaggggccaatgtagaggtcaggccatggcttcagagggtgcaagcctcaag
ccttggcagattccatgtggtgttgagcctgccagtgcacagaagtcaagaattgggatt
tgggaaccttcacctagatttcaaaggatgtatggaaatgcctggatgtccaggcagaag
tttgctgcaggatcaggggtctcatggagaacctctgctagggcagtgcagaagggaaat
atggggttggagcccacacacagagtccttactggggcactacctagtggaactgtgaga
agaagaccaccatcttccagaccccaaaattgtagatccaatgacagcttgcactgtgca
cctggaaaagccacagacactcaatgctag

>gi568815592f:126240274_126446322|GENSCAN_predicted_peptide_10|104_aa
MGEAGNHHSQQTIARTKSRTPHVLTHRYLKTEEWRICSAGNKRILLEIRGRRKFTFGFQY
NSRVMVVLSNTFLNGSLLDTNMKLAKLSRPNPSFGICGNQEISS

>gi568815592f:126240274_126446322|GENSCAN_predicted_CDS_10|315_bp
atgggtgaagctggaaaccatcattctcagcaaactatcgcaaggacaaaaagccgaaca
ccgcatgttctcactcataggtatctgaaaactgaagagtggagaatatgttcagcaggg
aacaagaggattcttttagaaataagaggtagaaggaaattcacatttggatttcagtac
aactcaagagttatggtagtgctatccaacacttttttgaatggtagtttgcttgatacc
aacatgaaacttgccaaactcagcaggccaaatcctagttttggaatatgtgggaaccaa
gaaatcagcagttaa