GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:46:25

Sequence gi568815592f:122897778_123163758 : 265981 bp : 36.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -    807    577  231  1  0   18   88   147 0.075   4.52
 1.01 Init -   3589   3172  418  1  1   57   36   512 0.293  39.54
 1.00 Prom -   9785   9746   40                              -3.55

 2.02 PlyA -  10231  10226    6                               1.05
 2.01 Sngl -  16564  16208  357  1  0   74   37   202 0.553   9.51
 2.00 Prom -  22110  22071   40                              -4.25

 3.09 PlyA -  22459  22454    6                               1.05
 3.08 Term -  29637  29198  440  1  2   37   38   209 0.350   5.25
 3.07 Intr -  32366  32089  278  1  2   37  110   125 0.408   5.84
 3.06 Intr -  32644  32519  126  0  0    1   80   130 0.433   2.37
 3.05 Intr -  43609  42238 1372  2  1   71   53   357 0.028  17.40
 3.04 Intr -  44452  44222  231  2  0   46   72   131 0.298   4.12
 3.03 Intr -  47033  46765  269  1  2   25   71   216 0.347   9.85
 3.02 Intr -  72375  72333   43  1  1   15  113    31 0.018  -5.32
 3.01 Init -  72662  72509  154  2  1   89   96    85 0.514   9.59
 3.00 Prom -  74733  74694   40                              -8.85

 4.00 Prom +  74767  74806   40                              -4.15
 4.01 Init +  80068  80234  167  0  2   78   83   105 0.798   8.15
 4.02 Intr +  80942  81140  199  2  1   35   18   166 0.025   2.73
 4.03 Term +  98470  98946  477  0  0  -18   44   453 0.263  24.15
 4.04 PlyA +  99330  99335    6                               1.05

 5.00 Prom +  99859  99898   40                             -12.03
 5.01 Init + 100001 100389  389  1  2   72   99   490 0.995  44.82
 5.02 Intr + 113208 113382  175  0  1   95   91   151 0.925  15.12
 5.03 Intr + 123911 124008   98  1  2   30   73    87 0.000  -0.71
 5.04 Intr + 132805 132829   25  1  1  107   90    16 0.030   0.81
 5.05 Intr + 139586 139693  108  1  0   53   75    75 0.049   2.26
 5.06 Intr + 158029 158249  221  0  2  100   69   206 0.471  16.08
 5.07 Term + 165897 165984   88  0  1  132   38    81 0.501   3.65
 5.08 PlyA + 166939 166944    6                               1.05

 6.02 PlyA - 167221 167216    6                               1.05
 6.01 Sngl - 184403 183888  516  2  0   57   29   242 0.252  10.99
 6.00 Prom - 206390 206351   40                              -2.95

 7.03 PlyA - 207160 207155    6                               1.05
 7.02 Term - 209793 209635  159  0  0   76   41    89 0.167  -0.04
 7.01 Init - 244612 244460  153  1  0   73  107   123 0.946  12.73
 7.00 Prom - 251659 251620   40                              -5.75

 8.03 PlyA - 252243 252238    6                               1.05
 8.02 Term - 259192 259081  112  0  1   83   37   131 0.957   4.55
 8.01 Init - 259821 259742   80  0  2   78  100    57 0.665   6.48

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  89735  90067  333  1  0   58   44   261 0.821  14.47
S.002 Term - 121299 121162  138  0  0  104   47   132 0.902   7.68


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:122897778_123163758|GENSCAN_predicted_peptide_1|217_aa
MRLRRKQRPYPEGSREAKSDKVRKADSGITKKKKEEEAEGGGGGGKKEERRRGRGRGRRR
RRRKGEGGEEEEEEEEEEEEEEGEGGGGGGGGGGKKKEEEGREKEGRKRGREEVKKEGGR
EGRKERRKEGSEGGRKERRSICTELGSLENRGISKILGKCLNSRKEERRRETKGSRLLAP
WLLGLIIDFVVTEGLAVWELLGVDEDPTASYGGMAGX

>gi568815592f:122897778_123163758|GENSCAN_predicted_CDS_1|651_bp
atgaggctaagaaggaagcagaggccatatcctgagggatctagagaggccaagtcagat
aaagtcagaaaagctgacagtggcattacaaagaagaaaaaagaagaggaagcagaagga
ggaggaggaggaggaaagaaggaagaaagaagaagaggaagaggaagaggaagaaggagg
aggaggaggaagggagaaggaggagaagaggaagaagaagaggaagaagaagaagaagaa
gaagaaggagaaggaggaggaggaggtggtggaggaggaggaaagaagaaagaagaagaa
ggaagagagaaggaaggaaggaagcgagggagggaggaagtaaagaaggagggagggaga
gagggaaggaaggagagaaggaaggaaggaagcgagggagggaggaaggaaagaaggagc
atatgtactgaacttgggtctctggaaaatagaggcatctccaaaatccttggaaagtgt
ctgaattcaagaaaagaggagagaagaagagagactaaaggctcaaggctgctggcaccc
tggcttctgggcttgattatagactttgttgtgacagaagggcttgcagtctgggagctc
ctgggggtggatgaagatcctacagcatcttatggaggcatggctggagnn

>gi568815592f:122897778_123163758|GENSCAN_predicted_peptide_2|118_aa
MISFDSMSHITVMLMQDIGSHSLRQLCPFGFAEYSPPPSCFLRLTLSVCGFSRCTVQAVS
GSTILGSGECGPLHTVPLGSAPVGALYKGSNHTFPFCTALAEALHEGFTPAAHLCLNI

>gi568815592f:122897778_123163758|GENSCAN_predicted_CDS_2|357_bp
atgatctcctttgactccatgtctcacatcacggttatgctgatgcaagacataggctcc
cacagcctcaggcagctctgtccctttggctttgcagagtacagtccccctcctagctgc
tttctcaggctgacattgagtgtctgtggcttttccagatgcacggtgcaagctgtcagt
ggatctactattctggggtctggagaatgtggtcctcttcacacagttccactaggcagt
gccccagttggggctctgtataagggatccaatcacacatttcccttctgtactgcccta
gcagaggctctccatgagggcttcacccctgcagcacacctctgcctgaacatctag

>gi568815592f:122897778_123163758|GENSCAN_predicted_peptide_3|970_aa
MTHTEWKSIDSICIISMLPPSLLEKEPCRQLGKEMGTVCHISAILEFRKDEARPRASPKT
KKIELRGRLTPYTAGYSSETKLPVERSGSNICCSPISTVLQPLLPIARQTGSGVGLQQTP
TDLQLRDLTVRRKTNKQKGHPHQNPICTSSSSKTKEIQTTIREYYKHLYANKLENLEEMD
KFLNTYTLPTLNQEEVESLNRPITGSEIEAIINSLPIKTVPEQTDSQPNSIRVLEVLATA
IMQKKEINGIQLGNEEVKLSLFADDMIVYLENPIISAQNLLKLISFSKVSGYKIKVQKSQ
AFLYANNRQTESQIMSELPFTIASKRIEYLGIQLIRDVKDLFKENYKPLLKEIKEDTNKW
KNIPCSWVGRLNIVKMAILLKIIYRFNAIPINLPMTFFTELEKITLKFIWNQKRARIAKS
ILSQKNKAGGITLPDFKLYYKATVTKTEWYWYQNRYTDQWNRTEPSEIMPHIYNHLIFDK
SDKNKKWGRDSLFNKWCWENWLAICRKLKQDPFLTPYTKINSRWIKDLNVRPKTIKTLEE
NLGHTIQDIGMGKDFMSKTPKAMATKDKIDKWDLIKLKSFCTAKETTIRVNRQLIEWEKI
FAIYSLDKGLISRIHNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKRHMKKCSSSL
TIREMQIKTTMRYHLIPVRMAIIKKSGNNSLLALGSLGGLNKEESPTRAAVPDHGQTASL
SGTPMHPSSLDSLLALESPGVLDKEGFPSMQHTCSTKKQPDCFFKQVSDPVSPDWVRPPN
RGLQTPPIGVSRPATGQYTPGMELPEEGAGCHLCCFVAFIGDTPEIQTTIRECYKHLYVY
KLENPEEIDKFLDTYTLPSLNQEEMESLKRPITSSEIEAVINSLRPDKFTAEFYQRYKEE
LIPFLLKPFQKIKKEGLLPNSFYEASIILTPKRGRDTTTTITTTTTTKKNFRLISLTNID
AKILNKILAN

>gi568815592f:122897778_123163758|GENSCAN_predicted_CDS_3|2913_bp
atgactcacactgaatggaaatcaatcgactctatctgtataataagcatgctcccccct
tcactcttggagaaggagccatgcagacagctgggaaaagagatgggcactgtgtgtcac
attagtgctatactggagttcaggaaagatgaggccagacccagggcttctccaaagaca
aagaagattgaactaaggggcagactgacaccttacacggccgggtactcctctgagaca
aaacttccagtggaacgatcaggcagcaacatttgctgttcaccaatatccactgttctg
cagcctctgctgccgattgccaggcaaacagggtctggagtgggcctccagcaaactcca
acagacctgcagctgagggacctgactgttagaaggaaaactaacaaacagaaaggacat
ccacaccaaaaccccatctgtacatcatcatcatcaaagaccaaagaaatacaaactacc
atcagagaatactataaacacctctatgcaaataaactagaaaatctagaagaaatggat
aaattcctcaacacatacaccctcccaacactaaaccaggaagaagttgaatccctgaat
aggccaataacaggctctgaaattgaggcaataattaatagcctaccaatcaaaacagtc
ccggaacagacggattcacagccgaattctatcagagtgttggaagttctggccacggca
atcatgcagaagaaggaaataaacggtattcaattaggaaatgaggaagtcaaattgtcc
ctgtttgcagatgacatgattgtatatctagaaaaccccatcatctcagcccaaaatctc
cttaagctgataagcttcagcaaagtctcaggatacaaaatcaaagtgcaaaaatcacaa
gcatttctatacgcaaataacagacaaacagagagccaaatcatgagtgaactcccattc
acaattgcttcaaagagaatagaatacctaggaatccaacttataagggatgtgaaggac
ctcttcaaggagaactacaaaccactgctcaaggaaattaaagaggatacaaacaaatgg
aagaacattccatgctcatgggtaggaagactcaatattgtgaaaatggccatactgctc
aagataatttatagattcaatgccatccccatcaatctaccaatgactttcttcacagaa
ttggaaaaaattactttaaagttcatatggaaccaaaaaagagcccgcattgccaagtca
atcctaagccaaaagaacaaagctggaggcatcacgctacctgacttcaaactatactac
aaggctacagtaaccaaaacagaatggtactggtaccaaaacagatatacagaccaatgg
aacagaacagagccctcagaaataatgccacatatctacaaccatctgatctttgacaaa
tctgacaaaaacaagaaatggggaagggattccttatttaataaatggtgctgggaaaac
tggctagccatatgtagaaagctgaaacaggatcccttccttacaccttatacaaaaatt
aattcaagatggattaaagacttaaatgttagacctaaaaccataaaaaccctagaagaa
aacctaggccacaccattcaggacataggcatgggcaaggacttcatgtctaaaacacca
aaagcaatggcaacaaaagacaaaattgacaaatgggatctaattaaactaaagagcttc
tgcacagcaaaagaaactaccatcagagtgaacaggcagcttatagaatgggagaaaatt
tttgcaatctactcattggacaaagggctaatatccagaatccacaatgaactcaaacaa
atttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaaggatatgaacagacac
ttctcaaaagaagacatttatgcagccaaaagacacatgaaaaaatgctcatcatcactg
accatcagagaaatgcaaatcaaaaccacaatgagataccatctcataccagttagaatg
gcgatcattaaaaagtcaggaaacaacagcctgctggctctggggagtctaggcggtctg
aataaggaggagtccccaacaagagctgctgtgccagatcatggccagactgcttcttta
agtgggaccccaatgcatccctcctcactggacagcctgctggctctggagagtccaggt
gttctggacaaggaagggttcccctcaatgcagcacacctgctctaccaaaaagcaacca
gactgcttctttaagcaggtttctgatcctgtctctcctgactgggtgagacctcccaat
aggggtctccagacacctcctataggagtgtccaggcctgcaacaggtcagtatacccct
gggatggagctcccagaggaaggagcaggctgccatctttgctgttttgtggccttcatt
ggtgatactccagaaatacaaacaactatcagagaatgctataaacacctctatgtatat
aaactagaaaatccagaagaaattgataaattcctggacacatacaccctcccaagtctg
aaccaggaagaaatggaatccctgaaaagaccaataaccagttctgaaattgaggcagta
ataaatagcctacgaccagataaatttacagcagaattctaccagaggtacaaagaagag
ctgataccatttctactgaaaccattccaaaaaattaaaaaggagggactcctccctaac
tcattttatgaggccagcatcattctgacaccaaaacgtggcagagatacaacaacaaca
ataacaacaacaacaacaacaaaaaaaaacttcaggttaatatccctgacgaacatcgat
gcaaaaatcctcaataaaatactggcaaattga

>gi568815592f:122897778_123163758|GENSCAN_predicted_peptide_4|280_aa
MVKYDLPGRFHQKKEESLRWSRVQLPKHTARAHFPRVRRTLLMRAAHPKRRIMGKRCPAG
PLMTLGTFGLHITFVLVDLESKEGPESSNAANTEFSYANLGQSEAEKVKLLLTLLKEKLS
SKQQQPEPPPQPGGATLTRTARESPRRGQRRAAAAPLRPPPRLLPEGSQRRWPPEWPSPS
RRSRPPPHLLSRRRKWQGQARTWDSGGPSPAILTPPARRGCGLPADDVAAAAPERIFGPG
PRRHPSSLLLPSRPEELMPLSPPPPLLKPRLMDARECRIA

>gi568815592f:122897778_123163758|GENSCAN_predicted_CDS_4|843_bp
atggtgaagtatgatcttccaggtaggttccaccagaaaaaggaagaaagccttagatgg
tcacgtgtacaactccctaaacacactgcacgtgctcacttcccaagggtaaggaggact
ctgctcatgcgggcagcccaccctaagcgaagaatcatgggaaagagatgccctgctggg
cccttaatgacactggggacctttggtttacacatcacttttgttttggttgatctggaa
agcaaagaaggaccagaatcttctaatgcagccaacactgaattcagctatgcaaacctg
ggtcagtcagaggcagagaaagtaaagttgctgctgacactgctaaaggaaaaactgtca
tcgaaacagcagcagccggagccgccgccgcagcccggtggggcaaccctgactcggacc
gctcgggagagccccaggagaggccagcgccgcgcagcagccgccccgctgcgcccacct
ccccggctgctcccggagggctcacaaaggcggtggccgcccgagtggccttctccatcc
aggcgttcgcgtcctcctccccaccttctctcccgaaggcgaaaatggcagggccaggcg
agaacctgggacagcggtggccctagccctgcgatcctcacccctcctgctaggagaggc
tgcgggctgcccgcggacgatgtggccgcggctgctcccgagcgcatcttcggcccgggt
ccccgccgccacccctcttctctgctccttccatcccgcccagaggagttgatgccgctg
tcgccgccgccgccgctgctgaagccgcggctgatggatgccagggagtgccgcattgct
tag

>gi568815592f:122897778_123163758|GENSCAN_predicted_peptide_5|367_aa
MTHLQAGLSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRA
RKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILV
LFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSML
RLAIEGLQEIGIGTAGMKDLVAYAAFSGITQMGMRCLITACSKLDFAVQLTLWYDSDLGS
GYPASTNSFDLTSPTSLSLYLKSSKIFLHGNNLNSLHQLIHPEILPSEFGGMLPPYDMGT
WARTLLDHEYDDDSEYNVDSYSMPVKEVEKELSPKSMKRSQSVVDPTVLKRMDKNEEENM
QPLLSLD

>gi568815592f:122897778_123163758|GENSCAN_predicted_CDS_5|1104_bp
atgactcatttgcaagccggtctctcccctgagaccctggagaaagctcgcctggagctc
aatgaaaacccagacacgctgcaccaggacatccaggaggtgagggatatggtcatcacc
aggccggacattggctttctgcgcacggatgatgccttcatcttacgcttcttgcgggct
aggaagtttcatcactttgaggccttccgcctcctggcgcagtactttgagtaccggcag
cagaacctggacatgttcaaaagctttaaggccaccgaccctggcatcaagcaggcactg
aaggatggcttccctgggggcctggccaatctggaccactatggcaggaagattctagtc
ctttttgctgccaattgggatcagagcaggtacacactggtggatattttgcgtgccatc
ttactttctttagaagccatgattgaagatcctgagcttcaagtgaatgggtttgttttg
atcatagactggagtaacttcactttcaagcaagcctctaaactcacaccaagtatgctg
cgattagctattgaaggcctgcaggaaattggcattggtacagcaggaatgaaggacctg
gttgcctacgcagccttctctggcatcactcagatggggatgagatgccttattacagct
tgctccaaactggactttgcagtccagttaaccctttggtatgactcagatttgggctct
ggttaccctgccagtactaacagctttgacttgacatctccaacttcactttctctctac
ttgaaatcaagtaagatatttttgcatggtaacaacctgaacagtctacaccaactaatt
catcctgagatcctgccctctgagtttggaggaatgctgcctccttatgacatggggaca
tgggcaagaacactgctagaccatgaatatgacgatgacagcgagtacaatgtagactcc
tacagcatgcctgtgaaggaagtagagaaggaactctccccaaagtccatgaagagatct
caatcagtagtggatcctacagtactaaaacgcatggataaaaatgaggaagaaaacatg
caaccattgctttctctggactaa

>gi568815592f:122897778_123163758|GENSCAN_predicted_peptide_6|171_aa
MHGNALMPRQKFAAGAEPSWRTSARAVQKGNVGSEPPQRIPTGALPTGAVRRGPQSSRSH
NGRSTGSLHCMPGKATDTQQQPMKAARIEAIPCKATGTELPKTMGTHLLHQCELDVRPRV
KGDHFGVLKFDIPAGFCTCMGPVTPSFWPFFPIWNFCIYPIPVPPLYLGSN

>gi568815592f:122897778_123163758|GENSCAN_predicted_CDS_6|516_bp
atgcatggaaatgccttgatgcctaggcaaaagtttgctgcaggggcagagccctcatgg
agaacctctgctagggcagtgcagaaaggaaatgtggggtcagagcccccacagagaatc
cctactggggcactgcctactggagctgtgagaagagggccacagtcttccagatcccat
aatggtagatccactggcagcttgcactgcatgcctggaaaagccacagacactcaacag
cagccaatgaaagcagccaggattgaggctataccctgcaaagccacagggacagagctt
cccaagaccatgggaacccatcttttgcatcagtgtgaactggatgtgagacctagagtc
aaaggagatcattttggagttttaaaatttgacatccctgctggattttgcacttgcatg
ggccctgtaaccccttcgttttggccattttttcccatttggaacttctgcatttaccca
atacctgtacccccattgtatctaggaagtaactag

>gi568815592f:122897778_123163758|GENSCAN_predicted_peptide_7|103_aa
MNTSTCFGECGRGVKWTLWESLIVVLFSAQVFLDAGYVNSEVVTWMDSGPLAMGELFFSF
KLWHKLGERLEDNEREEYQKNLQAFSHTWVWQQDTIFNPGLYK

>gi568815592f:122897778_123163758|GENSCAN_predicted_CDS_7|312_bp
atgaataccagcacctgctttggtgaatgtggcagaggagtgaagtggactctgtgggag
tccttgattgtagttttgtttagtgcacaggttttcttggatgctggttatgttaacagt
gaagttgtcacatggatggactcaggacctctggccatgggagaactcttcttttctttc
aagctctggcacaaacttggggagaggcttgaagacaatgagcgggaagaataccagaaa
aatctacaggcattttcccacacctgggtctggcagcaggataccatttttaatccaggt
ttatacaaataa

>gi568815592f:122897778_123163758|GENSCAN_predicted_peptide_8|63_aa
MGKTCLHDSIISHRMSSTTRGGYYNSSTTRSSGHRIDVSSASDESADRMHLALQNSSWEK
GPE

>gi568815592f:122897778_123163758|GENSCAN_predicted_CDS_8|192_bp
atgggaaaaacctgccttcatgattcaattatttcccaccggatgtcttccacgacacgt
gggggttattacaattcaagtaccacaaggagttctggacacagaattgatgtctcctca
gcatcggatgaatctgcagacagaatgcacttggctctccagaattccagctgggaaaaa
ggtcctgaatga