GENSCAN 1.0	Date run:  6-Nov-116	Time: 03:34:24

Sequence gi568815592r:53551601_53755272 : 203672 bp : 39.76% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +    591    875  285  2  0   53   42   197 0.750   6.89
 1.02 PlyA +   2616   2621    6                               1.05

 2.07 PlyA -   3489   3484    6                               1.05
 2.06 Term -   5775   5650  126  0  0   41   41    77 0.058  -4.40
 2.05 Intr -  10506  10473   34  2  1   83   86    45 0.266   1.11
 2.04 Intr -  12654  12535  120  2  0   77   75    98 0.725   6.09
 2.03 Intr -  13289  13198   92  2  2   91   59    95 0.861   4.77
 2.02 Intr -  22059  21782  278  1  2   12   41   223 0.391   6.31
 2.01 Init -  28035  27987   49  0  1   76   61    44 0.200   1.68
 2.00 Prom -  35116  35077   40                              -6.75

 3.06 PlyA -  35160  35155    6                               1.05
 3.05 Term -  37608  37491  118  2  1  120   40    87 0.854   4.13
 3.04 Intr -  38524  38398  127  2  1   52   56    97 0.732   1.72
 3.03 Intr -  60892  60857   36  2  0   73   98    42 0.035   1.02
 3.02 Intr -  65153  65005  149  1  2   59   60    46 0.100  -2.14
 3.01 Init -  66851  66697  155  2  2   54   71   189 0.957  13.31
 3.00 Prom -  70622  70583   40                              -4.85

 4.00 Prom +  77283  77322   40                              -3.75
 4.01 Init +  78494  78578   85  1  1   95   36    41 0.283   0.63
 4.02 Intr +  91135  91243  109  2  1  114   63    44 0.648   2.92
 4.03 Intr +  94165  94279  115  1  1   37  103   124 0.660   8.33
 4.04 Term +  94786  94812   27  0  0  120   48    16 0.571  -2.10
 4.05 PlyA +  96453  96458    6                               1.05

 5.03 PlyA -  96498  96493    6                               1.05
 5.02 Term - 100730  99998  733  1  1   89   52   762 0.917  64.65
 5.01 Init - 103672 102501 1172  1  2  110   80   821 0.956  76.54
 5.00 Prom - 106569 106530   40                              -7.85

 6.11 PlyA - 106691 106686    6                               1.05
 6.10 Term - 110209 110122   88  0  1   96   54   101 0.960   3.65
 6.09 Intr - 110765 110674   92  2  2   98   87    76 0.980   6.37
 6.08 Intr - 114072 114001   72  0  0  122   86    43 0.888   6.18
 6.07 Intr - 114330 114129  202  2  1   49   39   104 0.390  -0.03
 6.06 Intr - 139581 139418  164  0  2   67   69   136 0.775   7.45
 6.05 Intr - 140931 140811  121  2  1    0   87    84 0.861  -0.92
 6.04 Intr - 141071 140974   98  2  2  -12   87   152 0.145   2.99
 6.03 Intr - 150279 150231   49  2  1  108   75    12 0.231  -0.34
 6.02 Intr - 150966 150854  113  0  2   74   67   105 0.212   5.26
 6.01 Init - 153915 153595  321  0  0   72   46   165 0.832   8.16
 6.00 Prom - 162131 162092   40                              -5.15

 7.00 Prom + 163120 163159   40                              -8.55
 7.01 Init + 165157 165434  278  0  2   55   75   170 0.698   8.90
 7.02 Intr + 166126 166244  119  1  2  118   92     6 0.303   3.19
 7.03 Intr + 178497 178519   23  1  2  110  116    26 0.375   3.94
 7.04 Intr + 181140 181172   33  2  0   98   83    28 0.231   0.80
 7.05 Term + 192739 192873  135  0  0   55   39   132 0.273   2.04
 7.06 PlyA + 193136 193141    6                               1.05

 8.02 PlyA - 194137 194132    6                               1.05
 8.01 Term - 203020 202901  120  1  0   67   45   150 0.889   6.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:53551601_53755272|GENSCAN_predicted_peptide_1|94_aa
MWESLELPRDLLNGFAQHADMLTIMTADNNVHAEVVSDGDEKLVGNWSKSDSCYVLAKRL
VASCPCPRDLWNFELEKDDLGYLVEEISKQQSIQ

>gi568815592r:53551601_53755272|GENSCAN_predicted_CDS_1|285_bp
atgtgggaaagtttggagcttcctagagacttgttgaatggctttgcccaacatgctgac
atgttgacaataatgacagctgacaataatgtccatgctgaggtggtctcagatggagat
gagaaacttgttgggaactggagtaaaagtgactcttgttacgttttagcaaagagactg
gtggcatcgtgcccctgccctagagatttgtggaactttgaacttgagaaagatgattta
ggatacctggtggaagaaatttctaagcagcaaagcattcaataa

>gi568815592r:53551601_53755272|GENSCAN_predicted_peptide_2|232_aa
MERIPHEWFSTIPLVMKLLLDEGEQALGTRLKSPRTRLLNSAEGTASGDCMQPDPGMSHV
ILLQATGSAVGVARNRAGELAAGTSRGGAGYKPGVRHAVQDSQKYRTRIQCEESGMNLDF
EGKLTWNQILALLFASVIFGWGLPALKHDSTTPLPKAMEVAADEQAVLYLIQVSAWRGRR
SGTPFRDCADKRVQEKGETAEVNEENRIQPTEKKKSFAQKKRGSPRRKTNKP

>gi568815592r:53551601_53755272|GENSCAN_predicted_CDS_2|699_bp
atggagcggatacctcatgaatggtttagcacgatcccgttggtgatgaagctgctcctg
gacgaaggagagcaagccttggggactagactgaagtcgccgagaacccgactactaaac
agtgctgaggggacagcctctggggactgcatgcagccagaccccgggatgtctcatgtg
atcctccttcaggccaccggaagtgcagtgggcgtggccaggaacagagcgggagagcta
gcagcaggtacctccaggggaggagcgggttataaacctggtgtaaggcacgccgtccag
gactcccagaaataccgaacgagaatccaatgtgaggaaagtggaatgaacttggacttt
gaaggcaaactaacctggaatcaaatactggctctgctgtttgcaagtgtgatctttggc
tggggcctgccagccttgaagcatgactccacaacgcccctacccaaggccatggaggtt
gctgctgatgagcaagctgttttatatttaatccaggtttctgcttggagaggaagaagg
tcaggaacaccgttcagggactgtgcagacaagagggtgcaagagaaaggagagacagca
gaagtaaatgaagaaaacagaattcagccaactgagaagaaaaaatcttttgctcaaaaa
aagagaggaagtcctaggagaaaaacaaacaaaccatga

>gi568815592r:53551601_53755272|GENSCAN_predicted_peptide_3|194_aa
MKEKYENSPLAQGQKESVGGFRESDVFTGGEAEVRWQQVQVEVDDEEMEVERRGCWIHPA
ALWHSGHCAAVKMPLTPPHPSEIIIIDCCSCIPAVTTTSTTGASLLQDITRVEVKAGQKG
WKKGVSNHQRASVIDKQVLEGKDVNQEPEKNEILLWPLQLNRHKIKLIISPLSYSAATLI
SRCLISKSTDYQAV

>gi568815592r:53551601_53755272|GENSCAN_predicted_CDS_3|585_bp
atgaaagagaagtatgaaaacagcccactggctcaaggtcagaaggaaagcgtgggaggc
tttagagaaagtgatgtgttcacaggtggtgaagctgaagtcaggtggcagcaagttcag
gtggaagtggatgatgaggaaatggaggtggaaaggagaggatgctggatccatcctgct
gctctttggcattctgggcactgtgctgctgtgaagatgcctttaacacctccccaccct
agtgagatcatcatcattgattgctgcagttgcatccctgctgtcaccaccacttccacc
acaggggcatccttgctgcaggatatcacaagggtagaagtgaaggcagggcagaaaggc
tggaaaaagggagtttctaaccaccaaagagcatcagttattgataaacaagtacttgaa
ggaaaagatgttaaccaggaaccagagaaaaatgaaattttgctttggcctctccaactt
aacaggcataaaatcaaactcatcatctccccactctcatattctgctgcgactcttatt
tctcgatgtctcatctctaagtccactgactaccaagctgtttaa

>gi568815592r:53551601_53755272|GENSCAN_predicted_peptide_4|111_aa
MEIWKQFSSFLEDDAIDDNKHLGESLQPELLGNVILGFREGEHFHPNHPLLLSKVVLHSS
ETPLRHDSRHRRYICERDKIFTFKDDILKEMAEHKSTGKYPEMEYSSANGD

>gi568815592r:53551601_53755272|GENSCAN_predicted_CDS_4|336_bp
atggagatatggaagcaattttcttctttcctagaagatgatgcaatagatgacaataag
catttgggtgaatctctccagccagagcttcttgggaatgtcattttaggcttccgcgaa
ggtgagcattttcatccaaatcacccattattgctgtctaaagttgttctacattcttct
gagacgcctttaaggcatgactctagacaccggaggtacatctgtgaacgagacaaaatt
ttcacctttaaggatgatattctaaaagagatggcagaacataaatcaacaggaaaatat
ccagagatggaatactcttctgctaatggggattaa

>gi568815592r:53551601_53755272|GENSCAN_predicted_peptide_5|634_aa
MAPKKKIVKKNKGDINEMTIIVEDSPLNKLNALNGLLEGGNGLSCISSELTDASYGPNLL
EGLSKMRQENFLCDLVIGTKTKSFDVHKSVMASCSEYFYNILKKDPSIQRVDLNDISPLG
LATVIAYAYTGKLTLSLYTIGSIISAAVYLQIHTLVKMCSDFLIREMSVENCMYVVNIAE
TYSLKNAKAAAQKFIRDNFLEFAESDQFMKLTFEQINELLIDDDLQLPSEIVAFQIAMKW
LEFDQKRVKYAADLLSNIRFGTISAQDLVNYVQSVPRMMQDADCHRLLVDAMNYHLLPYH
QNTLQSRRTRIRGGCRVLVTVGGRPGLTEKSLSRDILYRDPENGWSKLTEMPAKSFNQCV
AVMDGFLYVAGGEDQNDARNQAKHAVSNFCRYDPRFNTWIHLASMNQKRTHFSLSVFNGL
VYAAGGRNAEGSLASLECYVPSTNQWQPKTPLEVARCCHASAVADGRVLVTGGYIANAYS
RSVCAYDPASDSWQELPNLSTPRGWHCAVTLSDRVYVMGGSQLGPRGERVDVLTVECYSP
ATGQWSYAAPLQVGVSTAGVSALHGRAYLVGGWNEGEKKYKKCIQCFSPELNEWTEDDEL
PEATVGVSCCTLSMPNNVTRESRASSVSSVPVSI

>gi568815592r:53551601_53755272|GENSCAN_predicted_CDS_5|1905_bp
atggcacccaaaaagaagattgtcaaaaagaacaaaggagatatcaatgagatgactata
atcgtagaagatagccccctaaacaaactgaatgctttgaatgggctcctagagggaggc
aatggccttagctgcatttcttctgaactaacagatgcttcttatggccccaacctcttg
gaaggtttaagtaaaatgcggcaggagaacttcctatgtgacttagtcattggtaccaaa
accaaatcctttgatgttcataagtcagtcatggcttcatgcagtgagtatttttacaac
atcctaaaaaaagacccgtcaattcagagggtggatctcaatgatatctcaccactaggc
ctggccactgtcattgcatatgcctacactggaaagctcactctctccttgtatacaata
ggaagcattatttctgctgctgtttatcttcagatccatactcttgtaaagatgtgcagt
gattttctgatacgggagatgagtgttgagaattgcatgtatgttgttaatattgctgaa
acatactccctaaaaaatgcaaaagcagcagcccagaaatttattcgggataacttcctt
gaatttgcagaatcggatcagtttatgaaacttacatttgaacaaattaatgaacttctt
atagatgatgacttacagttgccttctgagatagtagcattccagattgcaatgaaatgg
ttagaatttgaccaaaagagagtaaaatacgctgcagatcttttgagcaatattcgcttt
ggtaccatctctgcacaagacctggtcaattatgttcaatccgtaccaagaatgatgcaa
gatgctgattgtcacagacttctcgtagatgctatgaactaccacttgcttccatatcat
caaaacacattgcaatctaggcgaacaagaatccgaggtggctgccgagtcctcgtcact
gttgggggacgcccaggccttactgagaagtcccttagcagagacatcttgtatagagac
cctgaaaatggatggagcaagcttacggaaatgccagccaaaagttttaatcagtgtgtg
gctgtgatggatggatttctttatgtagccggtggtgaagaccagaatgatgcaagaaat
caagccaagcatgcagtcagcaatttctgcagatacgatccccgcttcaacacctggata
cacctggccagcatgaaccagaagcgcacgcacttcagcctgagcgtgttcaacgggctc
gtgtacgccgcgggcggccgcaacgcagaaggaagcctggcctcgctggagtgctacgtg
ccctccaccaatcagtggcagccgaagacgcccctggaggtggcgcgctgctgccacgct
agcgcggtcgccgacggccgcgtgctggtgaccggaggctacatagccaacgcctactcg
cgctctgtgtgcgcctacgacccggccagcgactcgtggcaggagctgccgaacctcagc
acaccccggggctggcactgcgcggtcacgctgagcgacagagtgtacgtgatgggcggc
agccagctggggccgcgcggggagcgcgtggacgtgctcaccgtggagtgctacagcccc
gcgaccggccagtggagctacgcggcgccgctgcaggtgggagtgagcactgcgggcgtc
tcggcgctgcatggccgcgcctacctggtggggggctggaacgagggcgagaagaagtac
aagaagtgcatccagtgcttcagccccgagctcaacgagtggacggaggacgacgagcta
cccgaggccactgtcggcgtgtcctgctgcaccctctcgatgcccaacaacgtgactcgg
gaatcccgggccagttcggtatcttctgtgccagtcagtatctga

>gi568815592r:53551601_53755272|GENSCAN_predicted_peptide_6|439_aa
MIHFPSLPPGTGAWSQRPWRLCKHSPLSSSEHLVNPTGVECGRDSQRVPPKKRNRDQGPE
ERAWGLMHLLVWPQCSPPRSLCQPINQTPKDDLEDFRGNHQSLGSYEQQPQQAACASEVY
PQDPRLFWALPPNGHNQQCQFEFTRACHLFWNINIHAGLPLTRQEKAQKEVSKGGRDRIM
KGYADPDNRTTGGSACEWQQGVWGSGVGENRQICYILEVDLAGLAERLLGWGKKRILLRL
KEVEKRHYYTLHLAAEASHRSDRVTPIEEPVFVPQPTHPNPNHYTKTISWSVQETQPLST
NRSPAPCPRLAGELKAKDGEEGARCSAPGPKRRLGLPYPVGRQRVTLKIAAAGSCQIPSQ
EESPAKTSSSQVDLPLHPRRNSYWQEQCEKCKPPTVLAEACKVLPSFDPKSHILTVTVTI
IDDDLEVHSEHLYHRRIKQ

>gi568815592r:53551601_53755272|GENSCAN_predicted_CDS_6|1320_bp
atgatccactttccaagcctccctcctggaactggggcctggtcccagcgaccctggaga
ctctgtaagcacagtcctctgagctcctcagagcatctagtcaaccccacaggtgtagag
tgtgggagagacagtcagagagtgcccccaaagaagagaaacagagaccagggcccagag
gaaagagcctggggcctcatgcacctcctggtctggcctcagtgcagcccacccagaagt
ctctgccaacccatcaatcagacaccaaaggatgacttggaagattttcgaggaaatcac
caaagcttgggctcctatgagcagcagccacagcaggccgcctgtgcctctgaagtctat
ccacaagatccacgactcttctgggcacttcccccaaatggccacaaccagcagtgccag
tttgagtttacaagagcctgccatctgttctggaatatcaacattcatgcagggttaccc
ctaacaagacaggagaaggcacaaaaggaggtgagcaaaggaggcagagatcggatcatg
aagggctatgcggaccctgacaataggaccactggaggaagtgcgtgtgaatggcagcag
ggagtctggggcagtggagttggagaaaataggcaaatttgttatattttggaggtagac
ctggcaggacttgctgaaagattgttgggttgggggaagaaaagaattttgctaaggctc
aaagaggtggaaaaaaggcactactacaccctacatctagcagctgaagccagccacaga
tctgatagagtaacaccaattgaagaaccagtttttgtgccccaacccacccaccccaat
cccaatcattatacgaagacaatcagctggtcagttcaagaaacccaacccctctccacc
aaccggagccccgccccctgcccccggctggctggagagttgaaggccaaagacggagag
gagggcgctcgctgctctgctcccgggccaaagcgcaggctcggcctgccttatccagtg
ggacggcaaagggtcactctaaaaattgctgcagccgggtcttgtcagatcccttcccaa
gaggagtctcctgctaaaacttcatcatctcaagttgacctgccacttcacccaaggagg
aattcctactggcaggaacagtgtgaaaagtgcaagccaccaacagtcctggcggaagct
tgtaaagttcttccttcctttgatcccaaaagccacattttgactgtcactgtgactatc
attgatgatgacctagaagtgcacagtgaacatttgtatcatcgtagaataaaacagtga

>gi568815592r:53551601_53755272|GENSCAN_predicted_peptide_7|195_aa
MTQSRFGTESTEAKRKDGEFRFSEFNASVRKCPKMRWTVGHQPMRRTWGIGDTNLEVINA
QEIGPGKRHLENYFRHKKIKESLQRSLGRGGQRSEGGVKSSNPLITWLASLVTNPHLEAK
GLVMSHLFSINSDRGYVMRKIVSKDGTNLEENQKIIDDQNWKTGTKFLVKIAPLKRHNGD
GGIVPKPKYRKRHVL

>gi568815592r:53551601_53755272|GENSCAN_predicted_CDS_7|588_bp
atgacccaaagcaggtttggaacagagagcacagaagcaaagcgaaaagatggagagttt
cgttttagtgagttcaatgcatctgtgaggaaatgtccaaaaatgcgttggactgttggt
catcagcctatgagaaggacttgggggattggggatacaaatttagaagtcatcaatgca
caggagattggacctgggaaaagacacctggagaactattttaggcacaaaaagataaag
gagagcctgcaaaggagcctgggaagaggtggtcagaggtcagagggtggagttaaaagt
tctaaccctctaatcacatggctggcttctctggtgaccaacccccatctggaagctaag
ggccttgtcatgagtcacctctttagcataaactcagataggggctatgtgatgcggaag
attgtgtcaaaggatggaacaaacctggaagagaaccagaaaatcatcgatgatcaaaac
tggaaaacaggtacaaaattcttagtgaaaattgctccactgaaacgtcataatggtgat
ggagggattgtcccaaaaccaaaataccggaaaagacatgtactctaa

>gi568815592r:53551601_53755272|GENSCAN_predicted_peptide_8|39_aa
CCAIWPFGGSPEADSIALKCGRSSKPRVEWGEVGWSGVE

>gi568815592r:53551601_53755272|GENSCAN_predicted_CDS_8|120_bp
tgttgtgccatctggccctttggaggctccccagaagctgactccattgccctgaaatgt
ggtcgttcatccaaacccagagtggagtggggtgaagtggggtggagtggagtggagtga