GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:19:30

Sequence gi568815592r:16206332_16428310 : 221979 bp : 45.31% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   2079   2074    6                               1.05
 1.02 Term -  10719  10423  297  0  0  -38   39   219 0.476  -0.33
 1.01 Init -  11929  11843   87  1  0   66   70    48 0.532   1.49
 1.00 Prom -  17345  17306   40                               0.24

 2.00 Prom +  19477  19516   40                              -4.26
 2.01 Init +  20655  20926  272  2  2   76   -8   210 0.417   4.64
 2.02 Intr +  22379  22485  107  2  2   35   30   138 0.264   2.56
 2.03 Intr +  32346  32449  104  1  2   71   59   166 0.103  11.89
 2.04 Intr +  40511  40630  120  1  0  101   94   218 0.995  24.39
 2.05 Intr +  43953  44036   84  2  0  101   96    91 0.753  11.22
 2.06 Intr +  46226  46357  132  1  0   65   36    75 0.481   0.84
 2.07 Intr +  48231  48404  174  2  0   63  115   136 0.792  13.94
 2.08 Term +  50984  51010   27  1  0   91   41    10 0.050  -5.33
 2.09 PlyA +  53124  53129    6                               1.05

 3.03 PlyA -  53497  53492    6                               1.05
 3.02 Term -  56132  55936  197  0  2   59   44   142 0.504   4.47
 3.01 Init -  58202  58010  193  2  1   72  119   119 0.740  12.54
 3.00 Prom -  58292  58253   40                              -4.66

 4.00 Prom +  63162  63201   40                              -3.46
 4.01 Init +  64398  64487   90  2  0   52   70    26 0.357  -2.31
 4.02 Intr +  68084  68165   82  1  1  101  110    82 0.624  10.91
 4.03 Intr +  72453  72559  107  1  2   72   65   140 0.990  10.03
 4.04 Intr +  79462  79504   43  0  1   60   87    26 0.065  -2.49
 4.05 Intr +  84131  84290  160  0  1   56   94   189 0.321  15.35
 4.06 Term +  88675  88855  181  1  1   53   40   262 0.986  14.98
 4.07 PlyA +  92394  92399    6                               1.05

 5.03 PlyA -  92804  92799    6                               1.05
 5.02 Term - 100528  99998  531  1  0  150   44   479 0.954  43.95
 5.01 Init - 121979 120063 1917  2  0   56   97  2479 0.648 233.13
 5.00 Prom - 127109 127070   40                              -5.46

 6.00 Prom + 133265 133304   40                              -6.66
 6.01 Init + 136059 136089   31  2  1   85   40    49 0.448  -0.25
 6.02 Intr + 137090 137230  141  0  0   31   48   135 0.481   4.12
 6.03 Term + 140855 141003  149  0  2  103   37   121 0.400   6.56
 6.04 PlyA + 141477 141482    6                               1.05

 7.00 Prom + 150597 150636   40                              -2.46
 7.01 Init + 152239 152280   42  0  0   66   13   126 0.031   1.38
 7.02 Intr + 165927 166052  126  2  0   63   75    66 0.533   3.68
 7.03 Term + 168664 168906  243  0  0   84   48   112 0.811   2.70
 7.04 PlyA + 170369 170374    6                               1.05

 8.07 PlyA - 172212 172207    6                               1.05
 8.06 Term - 173849 173658  192  2  0   64   38    66 0.007  -3.38
 8.05 Intr - 183337 183320   18  1  0  100   93    19 0.001   0.41
 8.04 Intr - 200634 200405  230  1  2   83   93    87 0.664   6.29
 8.03 Intr - 202145 202041  105  0  0  108   73    40 0.653   4.69
 8.02 Intr - 217275 217121  155  2  2  130   25    44 0.035   2.02
 8.01 Intr - 219568 219479   90  0  0   51   33   121 0.141   2.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:16206332_16428310|GENSCAN_predicted_peptide_1|127_aa
MQDWQAAPFTAPVCRHTVRDWQAAPPATPLRPGEKSIERSASGPALLGDPAHLPQPLARV
LSPSARGRQGRQAVPSEGPAEPTPNRNSRWPASTPRSPGFRPRLSRHTFPQAEEADSGLG
QPRKGVP

>gi568815592r:16206332_16428310|GENSCAN_predicted_CDS_1|384_bp
atgcaggactggcaggcagctccatttacagccccggtgtgcaggcacacggtgcgggac
tggcaggcagctccaccagcaaccccgctaaggcctggcgagaaatcgattgagcgcagc
gccagtgggccggcgctgctgggggacccagcacaccttccgcagccgctggcccgggtg
ctaagcccctctgcccggggccgccagggccgacaggccgttccgagtgaggggcctgcc
gagcccacaccgaaccggaactcgcgctggccggcaagcaccccgcgcagccccggtttc
cgcccgcgcctttcccgccacactttcccgcaagctgaggaagccgactccggccttggc
cagcccaggaagggggtcccttag

>gi568815592r:16206332_16428310|GENSCAN_predicted_peptide_2|339_aa
MVGCRSPAQPSPAPPRPALRGGSKGPARNRAQRRWAGTAGGPSPLSAPAGPGAKPLIAPG
WQPARRSECGARHAHSHPELVLARKHRAQPGGVAISEKLGIQIHRILLPSTSNVTMGSWR
PDEKEPARSRCTMPRIDADLKLDFKDVLLRPKRSSLKSRAEVDLERTFTFRNSKQTYSGI
PIIVANMDTVGTFEMAAVMSQHSMFTAIHKHYSLDDWKLFATNHPECLQGVFGNVLLTGT
VAFITKCDTSTYYTARHQIKGEFKRDNVKNLVANVAVSSGSGQNDLEKMTSILEAVPQVK
FICLDVANGYSEHFVEFVKLVRAKFPEHTIMAVHLYPSS

>gi568815592r:16206332_16428310|GENSCAN_predicted_CDS_2|1020_bp
atggtgggctgcaggtccccagcccagcccagccccgccccgccccgccccgccctgcgg
ggaggcagtaaaggcccggcgagaaatcgagcgcagcgccggtgggccggcactgctggg
ggacccagcccactctccgcacctgctggcccaggtgctaagcccctcattgccccgggc
tggcagccggccaggcgctccgagtgcggggcccgccatgcccacagccacccggaactc
gtgctggcccgcaagcaccgcgcgcagcccggtggcgtagccatcagtgagaaacttgga
atccagatacacagaatcctgctgccttcaacttctaatgtgaccatgggctcctggaga
cctgatgaaaaggagcccgccaggagccgctgcaccatgccccgcatagatgcggacctc
aagctcgacttcaaggatgtcctgctccgacctaagcggagcagcctcaagagccgagcc
gaggtggatcttgaacgcaccttcacgtttcgaaattcaaagcagacctactcagggatt
cccatcatcgtggccaacatggacactgtgggcacgtttgagatggcagccgtgatgtca
cagcactccatgtttacagcaattcataagcattactccctggatgactggaagctcttt
gccacaaatcacccagaatgcctgcagggagtttttggcaatgtattgttaactggaact
gtggctttcattaccaagtgtgatacatcgacttactacacagcccgccaccaaataaaa
ggcgaattcaaaagggataatgttaaaaacttagtagcaaatgtagccgtgagttcaggc
agtgggcagaatgatctggaaaagatgaccagcatcctggaagctgtgccacaggttaag
tttatttgcctggatgtggccaatgggtattcagaacattttgtggaattcgtgaaactt
gtccgtgccaaatttcctgaacacaccattatggctgttcatctgtatccttcatcatag

>gi568815592r:16206332_16428310|GENSCAN_predicted_peptide_3|129_aa
MLLTQSLFGGLFTRTHMKFGAVTQIGGPPLGDQSPVLLLFAKDPPTTSGPRTDQPKKHLT
NFKSGACYKCQKSGHQAKECLQPRIPPKLSPICAGPHWKSDCLTHLAATPSAPGILAQGS
LTASHIFLA

>gi568815592r:16206332_16428310|GENSCAN_predicted_CDS_3|390_bp
atgttgctcacacaaagcctgtttggtggtctcttcacacggacgcacatgaaatttggt
gccgtgactcagatcgggggacctcccttgggagatcaatcccctgtcctcctgctcttt
gcgaaagatccacctacgacctcaggtcctcggaccgaccagcccaagaaacatctcacc
aatttcaaatccggagcttgctacaagtgccagaaatctggccaccaggccaaggaatgc
ctgcagcccaggattcctcctaagctgagtcccatctgtgcgggaccccactggaaatcg
gactgtctaactcacctggcagccactcccagcgcccctggaattctggcccaaggctct
ctgactgcttcccacatcttcttggcttag

>gi568815592r:16206332_16428310|GENSCAN_predicted_peptide_4|220_aa
MVEAFHNHFGFFQTVAVTTFGPWTDSAATQAGNVVTGEMVEELILSGADIIKVGVGPGSV
CTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMF
SGHTECAGEVFERNGRKLKLFYGMSSDTAMNKHAGGVAEYRASEGKTVEVPYKGDVENTI
LDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVFS

>gi568815592r:16206332_16428310|GENSCAN_predicted_CDS_4|663_bp
atggttgaggcatttcataatcactttgggtttttccagacagtagcagtgaccacattt
ggaccatggacagattcagcagccacacaggcagggaacgtggtgacaggagaaatggta
gaagagcttattctttccggagcagatatcatcaaagtgggagttggaccaggttctgtg
tgcaccacccgcaccaagacgggagtggggtacccccagctgagtgccgtcattgagtgt
gccgactctgcccatggcctgaagggccacatcatctctgatggaggctgtacgtgtcca
ggggatgtcgccaaagcctttggagctggagcagattttgtcatgctgggaggaatgttt
tcgggtcatacggagtgtgctggagaagtgtttgagaggaacggacggaagctcaagctc
ttctacgggatgagctctgacaccgccatgaacaagcacgcaggaggagttgctgagtac
agagcctctgagggtaagactgtggaagttccttacaaaggagatgtggaaaacactatc
ctggatattctcgggggactgaggtccacgtgcacctacgtgggggccgccaaactcaag
gagctcagcaggagggcaacattcatccgggtgacccagcagcacaacaccgtgttcagc
taa

>gi568815592r:16206332_16428310|GENSCAN_predicted_peptide_5|815_aa
MKSNQERSNECLPPKKREIPATSRSSEEKAPTLPSDNHRVEGTAWLPGNPGGRGHGGGRH
GPAGTSVELGLQQGIGLHKALSTGLDYSPPSAPRSVPVATTLPAAYATPQPGTPVSPVQY
AHLPHTFQFIGSSQYSGTYASFIPSQLIPPTANPVTSAVASAAGATTPSQRSQLEAYSTL
LANMGSLSQTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQQQQQQQHLSRAPGLITPGSPP
PAQQNQYVHISSSPQNTGRTASPPAIPVHLHPHQTMIPHTLTLGPPSQVVMQYADSGSHF
VPREATKKAESSRLQQAIQAKEVLNGEMEKSRRYGAPSSADLGLGKAGGKSVPHPYESRH
VVVHPSPSDYSSRDPSGVRASVMVLPNSNTPAADLEVQQATHREASPSTLNDKSGLHLGK
PGHRSYALSPHTVIQTTHSASEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGSLPQ
HLVIPGTQPLLIPVGSTDMEASGAAPAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVT
QAAYPAMVQAQIHLPVVQSVASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQ
SAEISNDLKIDSSTVERIEDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSC
CPERTSQLFDLPCSKLSVGDVCISLTLKNLKNGSVKKGQPVDPASVLLKHSKADGLAGSR
HRYAEQENGINQGSAQMLSENGELKFPEKMGLPAAPFLTKIEPSKPAATRKRRWSAPESR
KLEKSEDEPPLTLPKPSLIPQEVKICIEGRSNVGK

>gi568815592r:16206332_16428310|GENSCAN_predicted_CDS_5|2448_bp
atgaaatccaaccaagagcggagcaacgaatgcctgcctcccaagaagcgcgagatcccc
gccaccagccggtcctccgaggagaaggcccctaccctgcccagcgacaaccaccgggtg
gagggcacagcatggctcccgggcaaccctggtggccggggccacgggggcgggaggcat
gggccggcagggacctcggtggagcttggtttacaacagggaataggtttacacaaagca
ttgtccacagggctggactactccccgcccagcgctcccaggtctgtccccgtggccacc
acgctgcctgccgcgtacgccaccccgcagccagggaccccggtgtcccccgtgcagtac
gctcacctgccgcacaccttccagttcattgggtcctcccaatacagtggaacctatgcc
agcttcatcccatcacagctgatccccccaaccgccaaccccgtcaccagtgcagtggcc
tcggccgcaggggccaccactccatcccagcgctcccagctggaggcctattccactctg
ctggccaacatgggcagtctgagccagacgccgggacacaaggctgagcagcagcagcag
cagcagcagcagcagcagcagcagcatcagcatcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcacctcagcagggctccggggctcatcaccccggggtccccccca
ccagcccagcagaaccagtacgtccacatttccagttctccgcagaacaccggccgcacc
gcctctcctccggccatccccgtccacctccacccccaccagacgatgatcccacacacg
ctcaccctggggcccccctcccaggtcgtcatgcaatacgccgactccggcagccacttt
gtccctcgggaggccaccaagaaagctgagagcagccggctgcagcaggccatccaggcc
aaggaggtcctgaacggtgagatggagaagagccggcggtacggggccccgtcctcagcc
gacctgggcctgggcaaggcaggcggcaagtcggttcctcacccgtacgagtccaggcac
gtggtggtccacccgagcccctcagactacagcagtcgtgatccttcgggggtccgggcc
tctgtgatggtcctgcccaacagcaacacgcccgcagctgacctggaggtgcaacaggcc
actcatcgtgaagcctccccttctaccctcaacgacaaaagtggcctgcatttagggaag
cctggccaccggtcctacgcgctctcaccccacacggtcattcagaccacacacagtgct
tcagagccactcccggtgggactgccagccacggccttctacgcagggactcaaccccct
gtcatcggctacctgagcggccagcagcaagcaatcacctacgccggcagcctgccccag
cacctggtgatccccggcacacagcccctgctcatcccggtcggcagcactgacatggaa
gcgtcgggggcagccccggccatagtcacgtcatccccccagtttgctgcagtgcctcac
acgttcgtcaccaccgcccttcccaagagcgagaacttcaaccctgaggccctggtcacc
caggccgcctacccagccatggtgcaggcccagatccacctgcctgtggtgcagtccgtg
gcctccccggcggcggctccccctacgctgcctccctacttcatgaaaggctccatcatc
cagttggccaacggggagctaaagaaggtggaagacttaaaaacagaagatttcatccag
agtgcagagataagcaacgacctgaagatcgactccagcaccgtagagaggattgaagac
agccatagcccgggcgtggccgtgatacagttcgccgtcggggagcaccgagcccaggtc
agcgttgaagttttggtagagtatcctttttttgtgtttggacagggctggtcatcctgc
tgtccggagagaaccagccagctctttgatttgccgtgttccaaactctcagttggggat
gtctgcatctcgcttaccctcaagaacctgaagaacggctctgttaaaaagggccagccc
gtggatcccgccagcgtcctgctgaagcactcaaaggccgacggcctggcgggcagcaga
cacaggtatgccgagcaggaaaacggaatcaaccaggggagtgcccagatgctctctgag
aatggcgaactgaagtttccagagaaaatgggattgcctgcagcgcccttcctcaccaaa
atagaacccagcaagcccgcggcaacgaggaagaggaggtggtcggcgccagagagccgc
aaactggagaagtcagaagacgaaccacctttgactcttcctaagccttctctaattcct
caggaggttaagatttgcattgaaggccggtctaatgtaggcaagtag

>gi568815592r:16206332_16428310|GENSCAN_predicted_peptide_6|106_aa
MGKREPMCIVAPRSLICLELQGSLRYLLALACIPGLDVRASFKPLKLYALSHIRKGDSPS
PIDHPRTEECGRTALAGSSTYCLCEDPLGEASWAPESGGALENLYV

>gi568815592r:16206332_16428310|GENSCAN_predicted_CDS_6|321_bp
atggggaaacgagaacctatgtgcatcgttgcgccccgctccctcatctgcttggagcta
caaggatctctgagatacctgctggcattagcctgtattccaggactggacgtcagggca
tcctttaagcccttaaagctgtatgccctttctcacatccgcaaaggggactcgcccagt
cccatcgaccacccaaggactgaggagtgcgggcgcacggcactggcaggcagctccacc
tactgcctctgtgaagatccactaggtgaagccagctgggctcctgagtctggtggggcc
ttggagaacctttatgtctag

>gi568815592r:16206332_16428310|GENSCAN_predicted_peptide_7|136_aa
MMAVAAAIKLAARLTQGQTNKKEGKREIKRSQRYGQKQEEGENGKEVEREQKRSTQNSAW
ASKEKTPTHPPTPAALQKCCRVKTMKKGKAEESRGILPSPSKDSLDVFRPYRRIKRRTPR
RKESQKLWHDQEGTWI

>gi568815592r:16206332_16428310|GENSCAN_predicted_CDS_7|411_bp
atgatggcagtggctgctgccatcaagctggctgcgcggctgacccagggccagaccaat
aagaaagaagggaaaagggaaattaaaagaagccagagatatggacagaaacaagaggaa
ggagagaatggaaaagaagttgagagggaacagaaaagaagtacacagaactcagcttgg
gctagcaaagaaaagacgcccactcacccacctaccccagcagctttgcagaagtgctgc
agggtgaagacaatgaagaaaggcaaggctgaagaaagccgaggcattctgccctctccc
agcaaagacagcctggacgtgttcagaccctatcgccgcatcaaaagaagaacaccaagg
agaaaggagtcacaaaagctctggcatgatcaggaaggcacctggatttga

>gi568815592r:16206332_16428310|GENSCAN_predicted_peptide_8|263_aa
XVHTLFVLEQRVICYGMWNTDPDIAAVFVVEPPPHWGASLQPVARSCKILSSVKRAPKTP
NPGPVEETIAALISHVTSLRAHGFSLDEGKYLRQYFFNILNNGMDIEMGEISVKAGFERV
HLPAVLPQEYTEQRRQGHYNLTRPPYCYVQFPLAGMGPHILYLSRMASSLELFKSSKSRR
EQRKEEVTCEMLRKKENEQKRESDALFLRICDLGRLQMSQASDVHLDCILTKIREVPAGM
LRTSFEENPVAKPIHCPWERNIL

>gi568815592r:16206332_16428310|GENSCAN_predicted_CDS_8|792_bp
nnggtgcacactttgtttgttctggaacagagggtcatctgctacgggatgtggaacact
gaccctgatattgcagccgtgtttgtggttgagcctccacctcactggggagcgtcattg
cagccagtggcaagaagctgcaaaattctctcatctgtgaagagagcccctaaaacccca
aatcccggaccagtagaggaaaccattgctgccctaatatcacatgttacaagtcttcga
gcccatgggttctcacttgatgaaggaaagtatttaagacaatacttctttaacatactt
aataatggaatggatatagaaatgggagaaatcagtgtgaaagcaggctttgaaagggta
cacttgccagcagttttgccacaagagtacacggaacaaaggagacagggtcattataac
ctgacgcgtccaccctactgctatgtccagtttccattggctggaatgggacctcacatt
ctgtatttgtcccgaatggctagcagcttagaactttttaaaagcagcaaaagcagaaga
gaacaaaggaaggaggaagtaacttgtgaaatgctgagaaagaaggaaaatgagcagaag
agggaatctgatgccttgtttctgcgcatctgtgatctgggcagattacagatgtcacaa
gccagtgatgtacacctggattgcatcctgaccaaaatcagggaagtacccgctggcatg
ttgaggacctcctttgaagaaaatcctgtggctaaaccaattcattgcccttgggagaga
aacattctatag