GENSCAN 1.0	Date run:  6-Nov-116	Time: 11:57:12

Sequence gi568815594r:73998601_74199120 : 200520 bp : 36.90% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    595    762  168  1  0  121  111    26 0.561   6.34
 1.02 Intr +  14964  15041   78  0  0   63  121    63 0.291   4.85
 1.03 Intr +  16610  16731  122  2  2   53   53    63 0.504  -1.48
 1.04 Intr +  16922  17005   84  0  0   55   94    72 0.498   3.37
 1.05 Intr +  20447  20566  120  0  0   78   82    28 0.232   0.75
 1.06 Term +  23675  23832  158  0  2   59   35    99 0.259  -1.19
 1.07 PlyA +  24404  24409    6                               1.05

 2.05 PlyA -  25245  25240    6                               1.05
 2.04 Term -  34456  34277  180  1  0  154   49    27 0.564   2.03
 2.03 Intr -  39576  39493   84  0  0  126   89    99 0.910  12.90
 2.02 Intr -  39813  39731   83  1  2   96   73    92 0.782   6.94
 2.01 Init -  40011  39912  100  0  1   80   94   205 0.999  18.77
 2.00 Prom -  40124  40085   40                              -4.85

 3.05 PlyA -  40319  40314    6                              -5.80
 3.04 Term -  40880  40611  270  2  0   -8   54   276 0.822   9.10
 3.03 Intr -  44617  44551   67  0  1   80   91    32 0.009   0.69
 3.02 Intr -  55810  55675  136  2  1   56   75   107 0.004   4.91
 3.01 Init -  60678  60618   61  0  1   87   99    46 0.332   7.10
 3.00 Prom -  71107  71068   40                              -4.95

 4.06 PlyA -  71730  71725    6                               1.05
 4.05 Term -  75139  75069   71  2  2   75   39    63 0.232  -2.78
 4.04 Intr -  77859  77775   85  0  1  108  121    31 0.367   6.87
 4.03 Intr -  87955  87782  174  1  0   58   49   157 0.019   8.01
 4.02 Intr -  91197  91028  170  1  2   93   45    57 0.355   0.64
 4.01 Init -  96014  95816  199  2  1   96   22   155 0.325   8.81
 4.00 Prom -  96335  96296   40                              -7.15

 5.08 PlyA -  96739  96734    6                               1.05
 5.07 Term -  97227  97089  139  2  1   66   33    95 0.174  -1.75
 5.06 Intr - 100084 100001   84  0  0  134  106    87 0.989  13.12
 5.05 Intr - 100322 100199  124  0  1  107  103    96 0.985  11.72
 5.04 Intr - 100977 100421  557  2  2   49   94   339 0.029  22.16
 5.03 Intr - 113000 112804  197  2  2   84   97   116 0.917   9.39
 5.02 Intr - 113934 113846   89  1  2   47   64    84 0.041   0.67
 5.01 Init - 114993 114972   22  0  1   90   81    14 0.038   0.81
 5.00 Prom - 119408 119369   40                              -4.65

 6.00 Prom + 129010 129049   40                              -5.05
 6.01 Init + 131391 131554  164  2  2   74   72    44 0.235   0.71
 6.02 Intr + 135255 135554  300  0  0   59   69   285 0.562  18.62
 6.03 Term + 139960 140104  145  1  1   21   53   174 0.066   3.60
 6.04 PlyA + 143302 143307    6                               1.05

 7.02 PlyA - 145540 145535    6                               1.05
 7.01 Sngl - 149064 148828  237  0  0   60   43   165 0.477   4.04
 7.00 Prom - 157709 157670   40                              -1.55

 8.03 PlyA - 157936 157931    6                               1.05
 8.02 Term - 159961 159010  952  0  1   52   47   621 0.948  44.95
 8.01 Init - 168788 168637  152  2  2   36   43   154 0.395   3.82
 8.00 Prom - 171954 171915   40                              -7.55

 9.00 Prom + 172844 172883   40                              -7.65
 9.01 Init + 174885 174949   65  2  2   81   80    36 0.932   2.78
 9.02 Intr + 175906 176090  185  1  2   83   80    52 0.424   2.41
 9.03 Intr + 176681 176803  123  0  0  124   88   128 0.859  16.04
 9.04 Intr + 194042 194073   32  0  2   86   91    57 0.088   2.73

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  56130  56269  140  1  2   62   49   173 0.915   7.94
S.002 Init - 100988 100421  568  2  1   43   94   358 0.834  27.17
S.003 Init - 114993 114908   86  0  2   90   81    89 0.877   8.74


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:73998601_74199120|GENSCAN_predicted_peptide_1|243_aa
XQVILGFLNDFMNLWTSTSFGSQDNMITRDPCLLPLEVSGLKGPLNFVNSPTDHLLWLFQ
ACVVFILPVSAYNVTFSVTIVLRPIRGVNPLSCKSGTGLHPTRALADCLIVLWFTPQLTS
ITGMSDLKIHLLLVNASNIEFYGKPLILNDREKYSLTFLSESNTTMEVGYEIDLESYEQN
FFKREIEWNRKFEKGVMFSLYAWRYPYPVLVLSTLSIPVEAFANFLVRLGIFPRTSMDST
ADT

>gi568815594r:73998601_74199120|GENSCAN_predicted_CDS_1|732_bp
nngcaggtcattctaggtttcttgaatgactttatgaatctctggacttcaaccagcttt
ggaagccaagataacatgataacaagagacccttgtctcttgccacttgaagtcagtggc
ctgaaaggaccactgaattttgttaactcccctacagatcacctactttggctctttcag
gcttgtgtcgtttttatccttccagtgtcagcttacaatgtcaccttctcagtgaccatt
gttctaaggcctatccggggagtgaatcctctcagctgcaagtctgggacgggacttcat
cctactagagccctagctgattgcttgatagttctttggtttacaccacagttgacatcc
ataacaggaatgtctgacttaaagattcatttgttactggtcaatgcatctaacattgag
ttttacggaaaacccctgatacttaatgacagagagaagtattctctgacttttctgagt
gagtcaaataccactatggaagtaggttatgaaatagatttagagagttatgagcagaac
ttttttaaaagggaaatagaatggaatagaaaatttgaaaaaggagttatgttctcactc
tatgcgtggcggtatccatatcctgtcttggtactttctacgctttccattcctgttgaa
gctttcgctaacttccttgtgaggctgggaattttccccaggacttctatggattcaaca
gcagatacataa

>gi568815594r:73998601_74199120|GENSCAN_predicted_peptide_2|148_aa
MAHATLSAAPSNPRLLRVALLLLLLVAASRRAAGASVVTELRCQCLQTLQGIHLKNIQSV
NSHTQEWEESLSQPRIPHGSENHRKDTEQDELHLPESLAASRTSMDFPIFMPLITWLSPT
GAFSIPQCCPIYLENSPSFKTHISNDFL

>gi568815594r:73998601_74199120|GENSCAN_predicted_CDS_2|447_bp
atggcccacgccacgctctccgccgcccccagcaatccccggctcctgcgggtggcgctg
ctgctcctgctcctggtggccgccagccggcgcgcagcaggagcgtccgtggtcactgaa
ctgcgctgccagtgcttgcagacactgcagggaattcacctcaagaacatccaaagtgtg
aatagccacactcaagaatgggaagaaagcttgtctcaaccccgcatcccccatggttca
gaaaatcatcgaaaagatactgaacaagatgaactccatctacctgagtcacttgctgct
tctaggacttccatggactttccaatcttcatgcctttgattacttggttgtctcctact
ggagcgttttccattcctcagtgttgtcccatctacttggaaaactctccatcctttaaa
actcacataagtaacgatttcttgtag

>gi568815594r:73998601_74199120|GENSCAN_predicted_peptide_3|177_aa
MGIQNSPALLLMAVIVFGTFAVSVDSDLYTELRCVYVKSTFVLHPRNIHNLELVSAGPHC
SKDEVMMEQCLSLGSSKMQNLSHEPAMQREEGRYAGYKRRGHVIQPWLPRTLTLNSNFDT
DNLLPPNGKRKQGILSVIREYAKQGTSRTFFSGIRDDGCTFTESMMLDVHEITLNRK

>gi568815594r:73998601_74199120|GENSCAN_predicted_CDS_3|534_bp
atgggtattcagaactcaccagcactcctcctgatggctgtcattgtgtttggcacattt
gctgtaagtgtagacagtgacttgtacactgaactgcgctgcgtgtatgtgaagtcaacc
tttgtacttcatcccagaaacatccacaatttggagttggtctcagcaggaccccattgc
agcaaagacgaagtaatgatggagcagtgcctaagtttaggctcctccaaaatgcagaat
ttgagtcatgagcctgccatgcagagggaggaaggacgttatgcaggatacaaaagaaga
ggtcatgttatacagccctggcttccacggacactaacactgaattcaaattttgacact
gataatctgttgccaccaaatggaaaacgtaaacaaggtattctaagtgtgattagagaa
tatgcaaaacaaggaacaagtagaacattcttctctggaatccgagacgatggctgtact
ttcacagagagcatgatgttagatgtacatgaaataacgctaaaccgaaaatga

>gi568815594r:73998601_74199120|GENSCAN_predicted_peptide_4|232_aa
MVLVIGPQANSMDIVWVSILDQVDVKIVLFTPNCQEVASTTQSPIERVMAGSGTQAYLRW
WSQGEGIYLGSVITRAEGTNMPTSPTGCFNAAALAPASAKEFPLATLESPFGCPLQWIIA
TSLDLETLGFDKTQAETTVSALTTLSNVSPDTTYKETVTQAQQKITVQQLMAHLDSIRKN
MGLEKLRKGSRCNEIIFNIKQNIETVKLKVPQNKTVCGNEVFTEVTRLSGVH

>gi568815594r:73998601_74199120|GENSCAN_predicted_CDS_4|699_bp
atggtccttgtcattggtcctcaggccaactccatggacattgtctgggtctccatctta
gatcaagtagatgtgaaaattgtgcttttcacaccaaattgccaagaagttgcaagtacc
acgcagtctcctatagaacgtgttatggcaggaagtgggacacaagcctatttgaggtgg
tggtcacagggtgaaggaatatatcttggttctgtcattaccagggcagagggcactaac
atgcctacaagtccaactggctgctttaatgcagctgccttagctcctgcatctgcaaag
gagtttcccttagccacactagagtctccttttggatgccctctgcaatggattatagct
acttccttggacttggaaactcttggatttgacaaaacacaagcagaaacaacagtatca
gcattaactactttatcaaatgtcagcccggatactacctataaagagacggtcactcaa
gctcaacagaaaataacagtacaacagctaatggctcatttggactctatcaggaaaaac
atgggactggaaaaactcagaaagggttccagatgtaatgagattatatttaacattaag
caaaatatagaaactgtgaaattaaaagtacctcagaataagactgtatgtggaaatgaa
gtctttacagaggtaaccaggttaagtggagttcattag

>gi568815594r:73998601_74199120|GENSCAN_predicted_peptide_5|403_aa
MTSATASGSFCIGSRSLDEGNAVAPENSEMPATVEPQSPIEHINCQFIRNTTNNNNKKPL
QSGNVKFIRITQQEEQCSDSILVSQKEDVQRIGLKMFKTDLTREVTPPGKDVARSLRGSK
GSDPRRTALGSRSASSQAVISVSLRAAGSRSRSRDSGQKENIPQLAGVTQDSQTRTSLVS
APTPLHPRGGAIAFLPNSGSIWSSGNFPGPGLRAFQPQPCIKGVRRSRRATEPGPQAAPC
QLSSSHSRSNRLLSPMARATLSAAPSNPRLLRVALLLLLLVAASRRAAGAPLATELRCQC
LQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEKMLKNGI
LMGPHIAFALWGTLYSVLPQDDSSTPGFQDRNTIVMSKEERPQ

>gi568815594r:73998601_74199120|GENSCAN_predicted_CDS_5|1212_bp
atgacttcagcaactgcttctggcagcttttgcattgggagccggagtctagatgagggg
aatgcagtggcacctgaaaactcagagatgccagcaactgtggagccccagtctccaata
gaacatatcaactgccaattcatcagaaatactaccaacaacaacaacaaaaaacccctt
caatcaggaaacgttaaatttattagaattactcaacaggaggaacaatgctctgacagc
attttagtgtctcagaaggaggatgttcagagaattggactcaaaatgtttaaaactgat
ctgacaagagaagtaactccccccggtaaggatgtagcgcggtccctacgtgggtctaag
ggatctgacccacgacgcactgcactgggttcacgaagcgcctcctcgcaggcggttatc
tcggtatctctgagagcggcgggctctcgctcccgctccagggattcggggcagaaagag
aacatcccacagttggcgggagttacgcaagacagtcagacccggacgtcactcgtgagt
gccccgacccccctccaccccagaggcggggccatcgccttccttccgaactcgggatcg
atctggagctccgggaatttccctggcccgggactccgggctttccagccccaaccatgc
ataaaaggggttcgccgttctcggagagccacagagcccgggccacaggcagctccttgc
cagctctcctcctcgcacagccgctcgaaccgcctgctgagccccatggcccgcgccacg
ctctccgccgcccccagcaatccccggctcctgcgggtggcgctgctgctcctgctcctg
gtggccgccagccggcgcgcagcaggagcgcccctggccactgaactgcgctgccagtgc
ttgcagaccctgcagggaattcacctcaagaacatccaaagtgtgaaggtgaagtccccc
ggaccccactgcgcccaaaccgaagtcatagccacactcaagaatgggcagaaagcttgt
ctcaaccccgcatcgcccatggttaagaaaatcatcgaaaagatgctgaaaaatggaatt
ttgatgggacctcatatagcgtttgccctctggggaactttgtattcagtgctgccccag
gatgacagcagcacaccaggttttcaggacagaaacacaattgtcatgtcaaaggaagaa
agacctcaataa

>gi568815594r:73998601_74199120|GENSCAN_predicted_peptide_6|202_aa
MDKFLDTYTLPRLNQEEVESLNRPITSSEIEAVINSLPTKKSPGPDKFTAEFYQRNQKEI
HSSKIFTSSNPEILYEDETVPVGTEKWKHSEQMVGEPDSTSMRPLPCITPGISSMKNLPS
THGFCTEKREIEIVNQLSHLLRFPARRPAFALNHRNNGEPLARSRAAMGTSLDQERSRHP
AGSGGVEVNGGSGRAANSSGGW

>gi568815594r:73998601_74199120|GENSCAN_predicted_CDS_6|609_bp
atggacaaattcctggacacatacaccctcccaagactaaaccaggaagaagtcgaatcc
ctgaatagaccaataacaagttctgaaattgaggcagtaattaatagcctaccaaccaag
aaaagcccaggaccagacaaattcacagccgaattctaccagagaaaccaaaaagaaata
cacagcagcaagatcttcaccagcagcaacccagagatcctgtatgaggatgagacagtt
cctgtaggtacagagaagtggaaacattctgagcagatggtaggagaaccagattctaca
tccatgaggcctcttccctgcattacaccaggcatcagcagtatgaaaaatctgccctca
actcatggtttctgcactgaaaaacgtgaaattgagattgtcaaccagctttcccatctt
cttcggtttcctgccaggagacctgcctttgccttaaaccacaggaacaatggcgagcct
ttagcccgatccagagcggcaatgggaacctcgctggatcaggagcgcagcagacaccct
gctggatccggaggagtggaagtcaatggagggtctgggagggcagcaaacagcagtggt
ggatggtga

>gi568815594r:73998601_74199120|GENSCAN_predicted_peptide_7|78_aa
MWRNWKDEIEVDNQIFLHLGFPGRTHVPDLTCRKHYECLNGEISLRTAKDKRGEVETLLC
NSPKGDAKLEWLFSTTKL

>gi568815594r:73998601_74199120|GENSCAN_predicted_CDS_7|237_bp
atgtggagaaattggaaagatgagattgaggtagacaaccagatttttctccatcttgga
ttccctggcaggacacatgtccctgacttaacctgcaggaagcattatgaatgcctgaat
ggagaaatatccctgaggacagccaaagacaaaaggggagaagtagaaactctgctctgt
aactcgcccaaaggagatgccaaattagagtggctgttcagcaccaccaagctgtag

>gi568815594r:73998601_74199120|GENSCAN_predicted_peptide_8|367_aa
MVHKPVAFHCCLSLEEVGAYSSLSKLASAGKALHQSVDLEILDGPSGMAHGASNVFLNQV
HLLQRWNILVREPRAEHVFVPQAEATATRPRDRQGHLTDKAVLDPARRRAAAHEPWAPRA
RAPPAPPPTSHRQRLRTRRPQPSYLTPLLRKPRNALPGSPGALTEGAVLLPNAGARPRRP
RSSEKPRTGTVMAADPRLPDWGSTSRDSSPRGWRPGSALTRAGRAASSASQPGSGRHAEW
GKERFPGPGTELTECRVRRGRGQDPSPGPSEDVEACSVAWRLGPAPSQHIAGIPIATAQR
RPPNYHFRQHAPLSTKPEILPNSLRDYVELDLKQERSNRFIVSHFLCEIPWKLEKRTKVC
GEGAKPG

>gi568815594r:73998601_74199120|GENSCAN_predicted_CDS_8|1104_bp
atggttcacaagcctgtggcctttcattgctgtctatcgcttgaagaagtaggcgcctat
tccagtctttctaaactggcttcagcagggaaagcccttcaccagtcagtggatctagag
attcttgatgggccatccggcatggcccatggtgcctcaaatgtcttcctaaatcaagtg
cacctgctgcaaagatggaacattctggtgcgagagcccagagcagagcacgttttcgtt
ccccaagctgaggcaactgcgactcgcccgcgcgaccggcaaggccacctcacagacaag
gctgtcctcgacccagcccgccgccgcgcggccgcccacgagccttgggccccacgcgcg
cgagcgccgcccgcgcccccgccgacctcccaccgccagcggctccgcacccggcgcccg
cagccctcgtacctcacaccgctgctccgaaagccccggaacgcactcccgggctctccc
ggtgcccttacggagggtgctgtgcttctgcccaacgccggcgctcggccaaggcggccg
cggagcagcgagaagccgcggaccggcaccgtcatggccgcggatccccggcttccggac
tggggctccacctcccgcgactccagtcctcgcggctggaggcctggctccgccctcacc
cgggctggcagggcagcaagtagcgcttcccagccaggttccggcagacacgcagagtgg
ggtaaagagcggttcccaggaccggggacggaactgacagagtgccgggtccgcaggggg
cggggccaggacccaagtcccgggccctctgaggatgtggaagcgtgcagtgtggcctgg
cgactgggccccgcacccagccaacatatagctggcattcccatagcgacggcacagaga
aggcctccaaactatcactttaggcagcacgccccactttccaccaagccagagatcctg
cccaacagtctccgtgactacgtggaattggatttaaagcaggaaagaagtaataggttc
attgtttcccacttcctttgtgagattccttggaagttggagaaaagaacaaaggtgtgt
ggagaaggagcaaaacctggctga

>gi568815594r:73998601_74199120|GENSCAN_predicted_peptide_9|135_aa
MARLTAVVRGHAWGHGITFFFEHEAIIISGTEMAKHIQKEIQRGVESWVSLGNRRPHLSI
ILVGDNPASHTYVRNKIRAASAVGICSELILKPKDVSQEELLDVTDQLNMDPRVSGILVQ
LPLPDSRYLFHPHTQ

>gi568815594r:73998601_74199120|GENSCAN_predicted_CDS_9|405_bp
atggcaagactcacagctgttgtccggggccatgcctggggccatggaataacatttttc
tttgaacatgaagccattattatatcaggaaccgaaatggccaagcatatccagaaagaa
atacagcgaggtgtggaatcatgggtttcccttggaaacagaagacctcacctcagtata
attttagtgggagataacccagcaagccatacatatgtcaggaataagataagagctgcc
tctgctgtaggtatttgtagtgagctcattctaaaacctaaggatgtttctcaggaagaa
cttttggacgtaactgatcaattgaatatggacccaagagtcagcggtatattagttcag
ttaccactaccagacagtcgctatctctttcatcctcacactcag