GENSCAN 1.0	Date run:  6-Nov-116	Time: 11:59:16

Sequence gi568815595r:187135687_187386058 : 250372 bp : 43.22% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   9380   9574  195  1  0  104   48   134 0.614   8.41
 1.02 PlyA +  11660  11665    6                               1.05

 2.00 Prom +  12653  12692   40                              -2.96
 2.01 Init +  19002  19219  218  2  2   77   39   104 0.048   2.56
 2.02 Intr +  28851  28911   61  0  1   23  111    62 0.045   0.74
 2.03 Intr +  51567  51608   42  2  0  116  100    -7 0.092   1.74
 2.04 Intr +  61093  61247  155  0  2   94   18    66 0.171  -0.93
 2.05 Intr +  61904  62101  198  2  0   82  109   230 0.223  22.97
 2.06 Term +  63865  64384  520  1  1  136   44  1064 0.999 100.57
 2.07 PlyA +  65755  65760    6                               1.05

 3.22 PlyA -  66073  66068    6                               1.05
 3.21 Term -  84575  84385  191  0  2   91   38   276 0.838  20.51
 3.20 Intr -  85448  85349  100  2  1   50   98   132 0.999  10.08
 3.19 Intr -  87508  87441   68  2  2  102   57   116 0.849   8.52
 3.18 Intr -  88307  88212   96  0  0   93   72    31 0.475   1.98
 3.17 Intr -  89823  89638  186  1  0   97   75   171 0.999  16.36
 3.16 Intr -  90834  90721  114  1  0   93   92    59 0.992   7.22
 3.15 Intr -  94211  94074  138  0  0   74   63   111 0.993   7.64
 3.14 Intr -  96947  96835  113  1  2   69   96    99 0.999   8.82
 3.13 Intr - 100881 100002  880  1  1  129  101  1011 0.998  96.89
 3.12 Intr - 107929 107798  132  2  0   67  115   133 0.580  14.52
 3.11 Intr - 114643 114565   79  1  1  132   69    72 0.978   8.82
 3.10 Intr - 116066 115948  119  0  2  102   56    97 0.989   8.08
 3.09 Intr - 117629 117482  148  2  1  111   91    93 0.999  11.71
 3.08 Intr - 121174 120978  197  2  2   68  105   235 0.994  22.33
 3.07 Intr - 125186 125055  132  0  0   43   65   352 0.996  29.02
 3.06 Intr - 127034 126857  178  2  1   61  106   212 0.882  19.79
 3.05 Intr - 141081 140907  175  2  1   55   92    86 0.747   5.64
 3.04 Intr - 141359 141319   41  2  2   88  107     3 0.771  -0.78
 3.03 Intr - 143147 143073   75  2  0   17   91    71 0.398   0.01
 3.02 Intr - 150327 150139  189  0  0   84  100   185 0.927  19.08
 3.01 Init - 151015 151001   15  1  0   90   84    -4 0.814  -0.15
 3.00 Prom - 151538 151499   40                             -11.92

 4.00 Prom + 151957 151996   40                              -2.86
 4.01 Init + 153042 153154  113  2  2   61   54    77 0.381   1.28
 4.02 Intr + 163855 163991  137  1  2   44   61   152 0.751   8.31
 4.03 Intr + 177874 177921   48  2  0   99   53    47 0.477   0.95
 4.04 Intr + 182058 182173  116  1  2  118   90    11 0.658   4.47
 4.05 Intr + 185034 185076   43  2  1  123   53    17 0.664  -0.49
 4.06 Term + 185224 185375  152  2  2  134   38    50 0.827   2.67
 4.07 PlyA + 186006 186011    6                               1.05

 5.00 Prom + 205100 205139   40                              -3.76
 5.01 Init + 231999 232127  129  2  0   88   48   150 0.687   9.51
 5.02 Term + 232281 232469  189  2  0   74   54    82 0.350   0.85
 5.03 PlyA + 232479 232484    6                               1.05

 6.00 Prom + 234045 234084   40                              -5.46
 6.01 Init + 234433 234576  144  0  0   64   99    53 0.524   4.12
 6.02 Term + 235124 235687  564  1  0   66   45   172 0.270   5.09
 6.03 PlyA + 235802 235807    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:187135687_187386058|GENSCAN_predicted_peptide_1|64_aa
VMLMQNIGSRGLWQLHLCDTAGYSPHGCFHGLVLSVCSYSGHKVQAVDGSIILGSEVALF
SQLH

>gi568815595r:187135687_187386058|GENSCAN_predicted_CDS_1|195_bp
gtcatgctgatgcaaaatataggctcccgaggcctttggcagctccacctctgtgacact
gcaggatacagcccccatggctgctttcacgggctggtgttaagtgtctgcagctattcc
gggcacaaggtgcaagctgtggatggctctatcattctggggtctgaggtggccctcttc
tcacagctgcactag

>gi568815595r:187135687_187386058|GENSCAN_predicted_peptide_2|397_aa
MTILPKAIYKFNALIIKIPSFFTELEKTVLKSIWNQKRARIAKARLSKKRKSGGITLPDF
ILYYKAIVTKIACLGGKRAKSEGSKVRFDMDNLAVSGTNHPATPNHKVAVLAQGHCSMDP
IAQLFSTQSATSTDIELGTCLQTLPTCSDMFEMNELMNRWKLPSLTTDETMCKSVTTDEW
KKVFYEKMEEAKPADSWDLIIDPNLKHNVLSPGWKQYLELHASGRFHCSWCWHTWQSPYV
VILFHMFLDRAQRAGSVRMRVFKQLCYECGTARLDESSMLEENIEGLVDNLITSLREQCY
GERGGQYRIHVASRQDNRRHRGEFCEACQEGIVHWKPSEKLLEEEATTYTFSRAPSPTKS
QDQTGSGWNFCSIPWCLFWATVLLLIIYLQFSFRSSV

>gi568815595r:187135687_187386058|GENSCAN_predicted_CDS_2|1194_bp
atgaccatactgccaaaagcaatctacaaattcaatgcactcatcatcaaaataccatca
ttcttcacagaattagaaaaaacagttctaaaatccatatggaaccaaaaaagagcccgc
atagccaaagcaagactaagcaaaaagaggaaatctggaggcatcacattacctgatttc
atactatactataaggccatagtcaccaaaatagcatgtttgggtggaaaaagagctaag
agtgagggctccaaagtacgttttgacatggacaacttggctgtgtctggcactaaccat
cctgccacccctaaccacaaggtggctgttcttgcacaaggccattgcagcatggatcct
attgcacagttattcagtacacagtcagctacaagcactgacatagagcttggcacatgt
ctgcaaaccctacccacatgctcggatatgtttgaaatgaatgaattaatgaaccggtgg
aaattgccttccctcactactgacgagaccatgtgtaaaagcgtgaccacagatgagtgg
aagaaagtcttctatgagaagatggaggaggcaaagccggctgacagctgggacctcatc
atagaccccaacctcaagcacaatgtgctgagccctggttggaagcagtacctggaattg
catgcttcaggcaggttccactgctcctggtgctggcacacctggcagtcgccctacgtg
gtcatcctcttccacatgttcctggaccgcgcccagcgggcgggctcggtgcgcatgcgc
gtcttcaagcagctgtgctatgagtgcggcacggcgcggctggacgagtccagcatgctg
gaggagaacatcgagggcctggtggacaacctcatcaccagcctgcgcgagcagtgctac
ggcgagcgtggcggccagtaccgcatccacgtggccagccgccaggacaaccggcggcac
cgcggagagttctgcgaggcctgccaggagggcatcgtgcactggaagcccagcgagaag
ctgctggaggaggaggcgaccacctacaccttctcccgggcgcccagccccaccaagtcg
caggaccagacgggctcaggctggaacttctgctctatcccctggtgcttgttttgggcc
acggtcctgctgctgatcatctacctgcagttctctttccgtagctccgtataa

>gi568815595r:187135687_187386058|GENSCAN_predicted_peptide_3|1121_aa
MVTCSASAHTVELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSY
LCEYDYVKIGYDYVERSILQESPQASWTAMEEQATLGQSASCCVIERDTRTQTPILAYSE
ELENENELASGKCNESSFYAKSANSTGFRVMENKRKLAVLRKSMWVETEDQVLATFCGRE
TTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKEREDEELSCD
HYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPYPKSSECLY
TIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPKVLGPFCGEKAPEPISTQSHS
VLILFHSDNSGENRGWRLSYRAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYK
VLKDNVEMDTFQIECLKDGTWSNKIPTCKNCRAPGELEHGLITFSTRNNLTTYKSEIKYS
CQEPYYKMLNNNTECGQPSRSLPSLVKRIIGGRNAEPGLFPWQALIVVEDTSRVPNDKWF
GSGALLSASWILTAAHVLRSQRRDTTVIPVSKEHVTVYLGLHDVRDKSGAVNSSAARVVL
HPDFNIQNYNHDIALVQLQEPVPLGPHVMPVCLPRLEPEGPAPHMLGLVAGWGISNPNVT
VDEIISSGTRTLSDVLQYVKLPVVPHAECKTSYESRSGNYSVTENMFCAGYYEGGKDTCL
GDSGGAFVIFDDLSQRWVVQGLVSWGGPEECGSKQVYGVYTKVSNYVDWVWEQMGLPQSV
VEPQVERDLPAAQRLIEHGVEEKGGNKDVIDSDISRHLEKQRGEVCGLPKFSRKLMARIF
NGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPEDPTLRDSDLLS
PSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMP
ICLPEGPQQEGALCSLTYLRTMQALQGGTVASFTNEKTKDQQGAMVIVSGWGKQFLQRFP
ETLMEIEIPIVDHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERG
QWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRVTGVRN

>gi568815595r:187135687_187386058|GENSCAN_predicted_CDS_3|3366_bp
atggtgacgtgctctgcttcagcccacaccgtggagctaaacaatatgtttggccagatc
cagtcgcctggttatccagactcctatcccagtgattcagaggtgacttggaatatcact
gtcccagatgggtttcggatcaagctttacttcatgcacttcaacttggaatcctcctac
ctttgtgaatatgactatgtgaagattggatatgactatgtggagcgtagtatacttcaa
gaaagcccacaggcctcctggacagctatggaagagcaggccacattgggtcagtctgca
tcctgctgtgtaattgagagagacaccaggacccaaacaccaattctagcttattcagaa
gaattagaaaatgaaaatgagcttgcttcaggaaagtgtaatgaaagctcattttatgcc
aaaagtgcaaacagcacaggcttcagggtgatggaaaacaaaaggaagctcgcagtgctg
aggaagagcatgtgggtagaaactgaggaccaggtgctggcaaccttctgtggcagggag
accacagacacagagcagactcccggccaggaggtggtcctctcccctggctccttcatg
tccatcactttccggtcagatttctccaatgaggagcgtttcacaggctttgatgcccac
tacatggctgtggatgtggacgagtgcaaggagagggaggacgaggagctgtcctgtgac
cactactgccacaactacattggcggctactactgctcctgccgcttcggctacatcctc
cacacagacaacaggacctgccgagtggagtgcagtgacaacctcttcactcaaaggact
ggggtgatcaccagccctgacttcccaaacccttaccccaagagctctgaatgcctgtat
accatcgagctggaggagggtttcatggtcaacctgcagtttgaggacatatttgacatt
gaggaccatcctgaggtgccctgcccctatgactacatcaagatcaaagttggtccaaaa
gttttggggcctttctgtggagagaaagccccagaacccatcagcacccagagccacagt
gtcctgatcctgttccatagtgacaactcgggagagaaccggggctggaggctctcatac
agggctgcaggaaatgagtgcccagagctacagcctcctgtccatgggaaaatcgagccc
tcccaagccaagtatttcttcaaagaccaagtgctcgtcagctgtgacacaggctacaaa
gtgctgaaggataatgtggagatggacacattccagattgagtgtctgaaggatgggacg
tggagtaacaagattcccacctgtaaaaactgtagagccccaggagagctggaacacggg
ctgatcaccttctctacaaggaacaacctcaccacatacaagtctgagatcaaatactcc
tgtcaggagccctattacaagatgctcaacaataacacagagtgtggtcagccctcccgc
tccctgccaagcctggtcaagaggatcattgggggccgaaatgctgagcctggcctcttc
ccgtggcaggccctgatagtggtggaggacacttcgagagtgccaaatgacaagtggttt
gggagtggggccctgctctctgcgtcctggatcctcacagcagctcatgtgctgcgctcc
cagcgtagagacaccacggtgataccagtctccaaggagcatgtcaccgtctacctgggc
ttgcatgatgtgcgagacaaatcgggggcagtcaacagctcagctgcccgagtggtgctc
cacccagacttcaacatccaaaactacaaccacgatatagctctggtgcagctgcaggag
cctgtgcccctgggaccccacgttatgcctgtctgcctgccaaggcttgagcctgaaggc
ccggccccccacatgctgggcctggtggccggctggggcatctccaatcccaatgtgaca
gtggatgagatcatcagcagtggcacacggaccttgtcagatgtcctgcagtatgtcaag
ttacccgtggtgcctcacgctgagtgcaaaactagctatgagtcccgctcgggcaattac
agcgtcacggagaacatgttctgtgctggctactacgagggcggcaaagacacgtgcctt
ggagatagcggtggggcctttgtcatctttgatgacttgagccagcgctgggtggtgcaa
ggcctggtgtcctgggggggacctgaagaatgcggcagcaagcaggtctatggagtctac
acaaaggtctccaattacgtggactgggtgtgggagcagatgggcttaccacaaagtgtt
gtggagccccaggtggaacgggatttaccagcagctcagcgactgattgaacatggggtt
gaagaaaagggaggcaacaaggatgtgattgattcagacattagcagacatctggaaaaa
caaaggggagaagtgtgtgggctccccaagttctcccggaagctgatggccaggatcttc
aatggacgcccagcccagaaaggcaccactccctggattgccatgctgtcacacctgaat
gggcagcccttctgcggaggctcccttctaggctccagctggatcgtgaccgccgcacac
tgcctccaccagtcactcgatccggaagatccgaccctacgtgattcagacttgctcagc
ccttctgacttcaaaatcatcctgggcaagcattggaggctccggtcagatgaaaatgaa
cagcatctcggcgtcaaacacaccactctccacccccagtatgatcccaacacattcgag
aatgacgtggctctggtggagctgttggagagcccagtgctgaatgccttcgtgatgccc
atctgtctgcctgagggaccccagcaggaaggtgctttatgttcattaacttatttacga
accatgcaagccttgcaaggtggcactgtagcctcatttacaaacgagaaaactaaggat
cagcagggagccatggtcatcgtcagcggctgggggaagcagttcttgcaaaggttccca
gagaccctgatggagattgaaatcccgattgttgaccacagcacctgccagaaggcttat
gccccgctgaagaagaaagtgaccagggacatgatctgtgctggggagaaggaaggggga
aaggacgcctgtgcgggtgactctggaggccccatggtgaccctgaatagagaaagaggc
cagtggtacctggtgggcactgtgtcctggggtgatgactgtgggaagaaggaccgctac
ggagtatactcttacatccaccacaacaaggactggatccagagggtcaccggagtgagg
aactga

>gi568815595r:187135687_187386058|GENSCAN_predicted_peptide_4|202_aa
MTAFSRPHRGDTEPPEAGSVKDWQQTALCSPEARCHVWCVCEDLSGRNHHLNQRAEYGRS
AVINVVGIIRSIEGFGGTRKQRQGTIHALNRNLWLKASAVTLQVWLWNHLCQKHPRSFLL
TKGVTGVLVQTDCMESLECPEPSRKIDSPKQAGPLAGSGSVSGQGAISGWATDEQQWPSG
SNCSEDFRQENGALSYPKGSEI

>gi568815595r:187135687_187386058|GENSCAN_predicted_CDS_4|609_bp
atgactgctttttccagaccacatcgaggagacactgagcctcctgaggccggttctgtc
aaggactggcagcagacagccctgtgtagcccagaagcccggtgccatgtgtggtgtgtc
tgtgaggacctttctggaagaaatcatcatttgaaccagcgggctgagtatggaagatct
gctgtcatcaatgtggtgggcatcattcgatccattgagggctttggtggaacaagaaag
cagaggcaggggaccatccatgccctcaacagaaacctctggctgaaagcttctgcagtg
actcttcaagtgtggctctggaatcatttgtgtcagaaacacccaaggagctttctgctt
actaaaggtgtgactggagttctagtccagaccgactgtatggagtctctggagtgccct
gagccttccaggaaaattgattcacccaaacaagcaggtccactggctgggtcaggctct
gtgtctgggcaaggagccatcagtggatgggctacagatgagcagcagtggcccagtggt
tctaactgctcagaggacttcaggcaagaaaatggggctctttcttatcccaagggctca
gaaatataa

>gi568815595r:187135687_187386058|GENSCAN_predicted_peptide_5|105_aa
MAGCRSRALPHREAAKAQREIELSAGGPALLGDLAHPPQLLAQQAEGAGSGFGLPRKGLP
QCSGWLKGSSSAARVGTEAEEAPRASEGCEGYQHAVTSHFAYYKK

>gi568815595r:187135687_187386058|GENSCAN_predicted_CDS_5|318_bp
atggcgggctgcaggtcccgagccctgccccacagagaggcagctaaggcccagcgagaa
atcgagctcagtgccggtgggccggcactgctgggggacctggcgcaccctccgcagctg
ctggcccagcaggctgagggagccggttctggctttggcctacccaggaaggggctccca
cagtgcagtggctggctgaagggctcctccagcgcggccagagtgggcaccgaggccgag
gaggctccgagagcgagcgagggctgcgagggctaccagcatgctgtcacctctcacttt
gcctattataaaaaatga

>gi568815595r:187135687_187386058|GENSCAN_predicted_peptide_6|235_aa
MRVIEGKGFAQGLPDVNWIFNPGMRDAVCFSRCERLATLLTRGNVLQQRSWASAQVQILC
HTYWEHWTSQGQVRMRLFGQRCQKCSWSQYEMPEFSSDSTMRILSNLVQHILKKYYGNGT
RKSPEMPVILEVSLEGSHDTANCEACTLGICGQGLKSCMTKPSKSLLPHLKTGNSSPGIG
AVYLANQAKNQSAEAKEAKGSGYEKLGPSRDPDPLNICVFILLLVFIVVKCFTSE

>gi568815595r:187135687_187386058|GENSCAN_predicted_CDS_6|708_bp
atgagggttatagaagggaagggctttgcccaaggtcttcctgatgtaaactggatcttc
aacccaggtatgagggatgcagtctgtttctccaggtgtgagagattagctacactactc
accagaggcaacgtgttacagcagcgaagttgggcttccgcccaagtgcagattctgtgc
cacacgtactgggagcactggacatcccagggtcaggtgcgtatgaggctctttggccaa
aggtgccagaagtgctcctggtcccaatatgagatgcctgagttctcctcggatagcacc
atgaggattctgagcaacctggtgcagcatatactgaagaaatactatggaaatggcacg
aggaagtctccagaaatgccagtaatcctggaagtgtccctggaaggatcccatgacaca
gccaattgtgaggcatgcactttgggcatctgtggacagggcttaaaaagctgcatgaca
aagccgtccaaatccctactcccccacctaaagactgggaattcctcacctggaattggt
gctgtgtacctcgcaaaccaagccaagaaccagtcagctgaggcaaaagaggctaagggg
agtgggtatgagaaattagggcccagtcgagacccagatccactgaacatctgtgtcttt
attttgctgcttgtatttattgtagtcaaatgctttacatcagaatga