GENSCAN 1.0	Date run:  6-Nov-116	Time: 02:18:17

Sequence gi568815595f:32291907_32552473 : 260567 bp : 43.00% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   3209   3204    6                               1.05
 1.02 Term -   8110   7998  113  2  2   69   45    59 0.466  -1.58
 1.01 Init -  13828  13759   70  1  1   79  119    49 0.636   8.31
 1.00 Prom -  29207  29168   40                              -3.56

 2.03 PlyA -  30209  30204    6                               1.05
 2.02 Term -  41461  41354  108  1  0   86   41    69 0.873   0.51
 2.01 Init -  43642  43580   63  1  0   98  105    60 0.772   9.85
 2.00 Prom -  46394  46355   40                              -7.16

 3.00 Prom +  53766  53805   40                              -5.96
 3.01 Init +  58774  58781    8  0  2  114   91     0 0.224   3.40
 3.02 Intr +  62859  63024  166  0  1   32   89    25 0.515  -3.04
 3.03 Intr +  65467  65640  174  0  0  107   79   203 0.833  21.44
 3.04 Intr +  75966  76082  117  2  0  134  109    89 0.999  16.26
 3.05 Intr +  89909  90098  190  1  1   76   87    46 0.415   2.46
 3.06 Term +  91387  91505  119  2  2   83   54    83 0.566   3.10
 3.07 PlyA +  92375  92380    6                               1.05

 4.00 Prom +  92758  92797   40                              -6.16
 4.01 Init + 100001 100159  159  1  0   72  115   160 0.481  15.07
 4.02 Term + 119545 119694  150  0  0   78   46    59 0.183  -1.39
 4.03 PlyA + 121165 121170    6                               1.05

 5.06 PlyA - 121407 121402    6                               1.05
 5.05 Term - 122511 122355  157  2  1   28   46   144 0.735   1.61
 5.04 Intr - 127539 127483   57  2  0   84  116    39 0.564   4.30
 5.03 Intr - 128716 128661   56  1  2   99   92    27 0.603   1.98
 5.02 Intr - 132379 132262  118  0  1   78   72    20 0.477  -0.13
 5.01 Init - 137094 136928  167  0  2   70   86   110 0.763   8.11
 5.00 Prom - 147997 147958   40                              -5.96

 6.00 Prom + 148534 148573   40                              -5.86
 6.01 Init + 149139 149141    3  2  0   66   89     0 0.265  -2.10
 6.02 Intr + 149934 150107  174  2  0   93  103   300 0.986  32.14
 6.03 Intr + 157548 157646   99  2  0  127   77   118 0.967  14.91
 6.04 Intr + 160486 160567   82  0  1  116  109    22 0.755   6.31
 6.05 Term + 179049 179353  305  1  2  -18   48   307 0.385  11.43
 6.06 PlyA + 182555 182560    6                               1.05

 7.03 PlyA - 186038 186033    6                               1.05
 7.02 Term - 192191 192054  138  2  0  141   43    59 0.930   4.66
 7.01 Init - 210839 210702  138  2  0   87  105   112 0.969  12.94
 7.00 Prom - 211935 211896   40                             -10.35

 8.00 Prom + 213855 213894   40                              -7.46
 8.01 Sngl + 216049 216426  378  0  0   66   45   342 0.924  23.86
 8.02 PlyA + 216650 216655    6                               1.05

 9.08 PlyA - 218754 218749    6                               1.05
 9.07 Term - 235002 234893  110  1  2   80   49    77 0.950   1.67
 9.06 Intr - 236695 236591  105  2  0  102   75    48 0.620   5.09
 9.05 Intr - 237754 237634  121  1  1   71   83    31 0.922   0.97
 9.04 Intr - 238614 238555   60  0  0   72   80    58 0.701   2.33
 9.03 Intr - 249300 249131  170  1  2   64   96    42 0.633   2.27
 9.02 Intr - 253200 252970  231  1  0   92   84    35 0.662   1.24
 9.01 Intr - 254059 253943  117  2  0   79  101    44 0.943   5.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:32291907_32552473|GENSCAN_predicted_peptide_1|60_aa
MMMLYELKSGISQPSTLTNAYSSEVLAMIFMMEKKGIIPFQHLQWLYPFSYVLPVAAFTL

>gi568815595f:32291907_32552473|GENSCAN_predicted_CDS_1|183_bp
atgatgatgctgtatgaactgaagagtgggatttctcaaccctccacacttactaatgcc
tactcatctgaggtgctggccatgatttttatgatggagaagaaaggcatcatccctttt
cagcacctacagtggctgtatccattcagttatgtattacccgtggctgctttcacacta
tga

>gi568815595f:32291907_32552473|GENSCAN_predicted_peptide_2|56_aa
MERVDHLAPENKFRNVKPSVENILSSKELDEESHNYNPVAKSGHSVFVWSTSYKGF

>gi568815595f:32291907_32552473|GENSCAN_predicted_CDS_2|171_bp
atggagagagttgaccacctggcccctgaaaacaagtttaggaatgtcaagccctccgtg
gagaacatactgagcagcaaggagctagatgaggaatcacacaattacaacccagtagcc
aaatctggccacagtgtttttgtatggtccacaagctacaaggggttttaa

>gi568815595f:32291907_32552473|GENSCAN_predicted_peptide_3|257_aa
MPRRCHAALHLLPVLLIQQNVKYMCIDYLSESIRAKNLISVRLSTFWNYIPFCVSSLSVL
GLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCF
NGSAFVLYLSAAVVDASSVSPERDSHNFNSWAASSRYIVGRWGNAGTTCAIQHQIISCRL
ELSTSGHSQEIIVSKFYCPPATVHRALFWEPDGISDNAQPSYHVLRSPSRVERLYVGIPV
TALTELPANCQHQLSAM

>gi568815595f:32291907_32552473|GENSCAN_predicted_CDS_3|774_bp
atgcccagacgctgccatgctgcattacatctattaccagtcttactgatccaacagaat
gtcaaatacatgtgtatagattacctgtcagagtcaattcgggccaaaaacctcattagt
gtgaggcttagcactttctggaattatatcccattttgtgtatcttcactttcagttctg
gggctgctggtatggacgcttattgctggaactgagtacttccgggtccccgcatttggc
tgggtcatgtttgtagctgtattttactgggtcctcaccgtcttcttcctcattatctac
ataacaatgacctacaccaggattccccaggtgccctggacaacagtgggcctgtgcttt
aacggcagtgccttcgtcttgtacctctctgccgctgttgtagatgcatcttccgtctcc
cctgagagggacagtcacaacttcaacagctgggcggcctcatcgagatacattgtgggg
agatggggtaatgcagggaccacctgtgcaattcagcaccaaattatctcttgccggctg
gaactaagtacaagtggccacagccaggaaataattgttagcaaattttattgtccaccc
gcaactgtgcacagagctctgttttgggaacctgacgggatatcggacaatgcacaaccc
agctatcatgttctgagaagcccaagccgtgtggagaggctgtatgtgggcattccagtg
acagccctcactgagctcccagccaactgccagcatcagctgtcagccatgtga

>gi568815595f:32291907_32552473|GENSCAN_predicted_peptide_4|102_aa
MSHGAGLVRTTCSSGSALGPGAGAAQPSASPLEGLLDLSYPRTHAALLKVAQMNISTQAI
VLYAIKSVSHAAFLRRIHTKTKSHQCWVCALAFDSHFGNVAK

>gi568815595f:32291907_32552473|GENSCAN_predicted_CDS_4|309_bp
atgtcgcacggagccgggctcgtccgcaccacgtgcagcagcggcagcgcgctcggaccc
ggggccggcgcggcccagcccagcgcgagccccttggaggggctgctggacctcagctac
ccccgcacccacgcggccctgctgaaagtggcgcaaatgaatatttctacacaagctatt
gtcctctatgctatcaagagtgtgagccatgcagcatttctcagaagaatccacacaaaa
actaaaagccatcagtgctgggtttgtgcactggcttttgactcccactttgggaatgtt
gctaagtga

>gi568815595f:32291907_32552473|GENSCAN_predicted_peptide_5|184_aa
MRLYIHKSYQCKYQRRALVGAGLVQSSKPWLVSEWGQVGHRWAAVICGFPRLSGARLLAL
GTLAPCYERLRALERPCVGVTAHKAASQHQLQCETPFQPCPQFKGMIIVTCRPREQGKDV
FSHILILLEVAISNEAIKGALVRNVKDEGTSRDLHQTEAVNAVLKYSGKEGANFQRQWNV
ENEN

>gi568815595f:32291907_32552473|GENSCAN_predicted_CDS_5|555_bp
atgaggctctacattcacaaaagttaccagtgcaaataccagcgcagagccttggtggga
gcaggtctggtgcagtcaagcaaaccctggctggtgtctgagtggggccaggtgggccac
aggtgggcagctgttatctgcggctttccacgactctcaggtgcaaggctgctcgcccta
ggaaccctggcaccatgttatgagaggcttagagcactggagaggccatgtgtaggtgtt
acagcccataaggccgccagccagcatcaactgcaatgtgagacaccttttcaaccgtgt
ccccagttcaaaggcatgatcattgtgacctgcaggcccagggaacaaggaaaagatgtc
ttttctcacattcttatactgctggaagttgcaataagtaatgaggcaataaaaggagcc
ttagtaagaaatgtcaaagatgaggggacgagcagagacttgcaccaaacagaagctgtg
aacgcagtgctgaaatacagcggtaaagaaggtgcaaattttcaacgtcagtggaacgtg
gagaatgaaaactga

>gi568815595f:32291907_32552473|GENSCAN_predicted_peptide_6|220_aa
MVTLLIAFICVRSSLWTNYSAYSYFEVVTICDLIMILAFYLVHLFRFYRVLTCISWPLSE
LLHYLIGTLLLLIASIVAASKSYNQSGLVAGAIFGFMATFLCMASIWLSYKISCVTQSTG
KLCNSHQLQKKKKEEEEEEEEEEEEEEDRRRTRRRGGEEGEGEEEEKRRKKKEEEEEKWP
YSKIGRWMVHPKPKNIPTASIPQVIRHVATFAQEPEQQRT

>gi568815595f:32291907_32552473|GENSCAN_predicted_CDS_6|663_bp
atggtcaccctgctgattgccttcatctgtgtgcggagctccctgtggaccaactacagc
gcctacagctactttgaagtggtcaccatttgcgacttgataatgatcctcgccttttac
ctggtccacctcttccgcttctaccgcgtgctcacctgtatcagctggcccctgtcggaa
cttctgcactatttaatcggtaccctgctcctcctcatcgcctccattgtggcagcttcc
aagagttacaaccagagcggactggtagccggagcgatctttggtttcatggccaccttc
ctctgcatggcaagcatatggctgtcctataagatctcgtgtgtaacccagtccacagga
aaactttgtaatagccaccaactacaaaagaagaagaaggaggaggaggaggaagaggaa
gaggaagaagaagaagaagaagatagaagaaggacaaggaggagaggaggagaggagggg
gagggggaggaggaggagaaaagaagaaaaaagaaagaagaagaagaagaaaagtggccc
tacagcaaaattggccgctggatggtacatcccaaacctaagaatattcctacagcttcc
atcccccaagtcatcagacatgtggccacatttgcccaagagcctgaacaacaaagaacc
taa

>gi568815595f:32291907_32552473|GENSCAN_predicted_peptide_7|91_aa
MENGAVYSPTTEEDPGPARGPRSGLAAYFFMGRLPLLRRVLKGLQLVFGFIASFMFLLDF
ITMLYEKRQESQLRKPENTTRAEALTEPLNA

>gi568815595f:32291907_32552473|GENSCAN_predicted_CDS_7|276_bp
atggagaacggagcggtgtacagccccactacggaggaggacccgggccccgccagaggc
ccccggagcggcctcgctgcctactttttcatgggccggctcccattgctccggcgcgtt
ctcaagggcttgcagctggtgtttggatttatagcaagttttatgttcctacttgacttt
atcactatgctgtatgaaaaacgacaggagtcccagctgagaaaacctgaaaataccact
agggctgaagccctcactgagccacttaatgcctaa

>gi568815595f:32291907_32552473|GENSCAN_predicted_peptide_8|125_aa
MASAKKGGQKKKGRSAINEVVTQEYTINIHKRTHGVRFKKCAPWALKEIRKFAMKEMVAP
DMCVATRLNKAVWAKGIRNVSYRIRVRLSRIRMKIHQISSILWLPMYRLPLSKIYRQSMW
MRTNC

>gi568815595f:32291907_32552473|GENSCAN_predicted_CDS_8|378_bp
atggcttccgcaaagaagggtggccaaaagaaaaagggccgttctgctatcaacgaggtg
gtgacccaagaatacaccatcaacattcacaagcgcacccatggagtgcgcttcaagaag
tgtgccccttgggcactcaaagagattcggaaatttgccatgaaggagatggtagctcca
gacatgtgcgttgctaccaggctcaacaaagctgtctgggccaaaggaataaggaatgtc
tcataccgaatccgtgtgcgattatccagaataaggatgaagattcaccaaataagctct
atactttggttacctatgtaccggttaccactttcaaaaatctacagacagtcaatgtgg
atgagaactaattgctga

>gi568815595f:32291907_32552473|GENSCAN_predicted_peptide_9|304_aa
XEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLK
FSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRD
FQEYVEPGEDFPASPQRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKFVHEKEI
MAEDDQVFLMKLQDASPRVPGGSPRTPNRSVSSNVASVSPIPAGSKKIDPNMKAGATSEG
VLANFFNSLLSKKTGSPGGPGVSGGSPAGQKPVLDVHAELDRITRKPVTVSPTTPTSPTE
GEAS

>gi568815595f:32291907_32552473|GENSCAN_predicted_CDS_9|915_bp
ngtgaagatggagctggaaaaacaagcttaataagaaaaattcagggaatagaggagtat
aagaaaggaagaggattggaatatttgtacttaaatgtgcatgatgaagacagggatgat
caaacaagatgtaatgtttggatcttagatggagacctatatcacaaaggcctccttaaa
ttttcactggatgccgtatctctgaaggatactctagttatgctggttgttgacatgtca
aagccttggactgctttggattctttacagaaatgggcaagtgttgttagagaacatgtt
gacaaactgaaaatccctcctgaagaaatgaaacaaatggaacaaaagttgattagagac
ttccaagaatatgtagagccaggagaagacttcccggcttctccccagagaagaaatact
gcgtcacaagaagacaaagatgacagtgtagttttacctctgggtgcggatacacttaca
cataacttgggcattccagtactagtagtttgcacaaagtttgtacatgagaaggaaatt
atggcagaagatgatcaggtgtttcttatgaagctacaggatgcctcaccaagagtccca
ggaggctccccacgaacaccaaatagatctgtatcatctaatgttgccagcgtgtcaccc
attcctgctgggtcaaaaaaaattgatccaaacatgaaagctggagctacaagtgaaggc
gttctggcaaatttcttcaacagtttgttgagtaaaaagactggctctccaggaggccct
ggtgtgagtggtggtagccctgcaggccagaagcctgtcttagatgttcatgcagaacta
gacagaattacacgaaaaccagttacagtttctcccacaacacctacatctcctacggaa
ggagaagcttcttga