GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:44:28

Sequence gi568815577f:33973701_34242597 : 268897 bp : 43.04% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  14647  14701   55  0  1   87   56    36 0.010   1.75
 1.02 Intr +  35922  36058  137  1  2   54   81    80 0.108   4.19
 1.03 Intr +  65069  65170  102  1  0   64  115    65 0.868   7.17
 1.04 Intr +  81248  81361  114  1  0   48   97    37 0.497   1.24
 1.05 Intr +  85860  85986  127  2  1   57   77    98 0.923   5.85
 1.06 Intr +  95532  95654  123  1  0  104   17    92 0.809   4.26
 1.07 Intr +  99169  99423  255  2  0   69   27   106 0.430   0.02
 1.08 Intr +  99837 100045  209  1  2   30  114   245 0.990  20.10
 1.09 Term + 108326 108346   21  1  0   94   49     9 0.071  -4.09
 1.10 PlyA + 109082 109087    6                               1.05

 2.00 Prom + 110853 110892   40                              -4.86
 2.01 Sngl + 121499 123655 2157  1  0   56   43  1386 0.906 125.04
 2.02 PlyA + 126487 126492    6                               1.05

 3.00 Prom + 127582 127621   40                              -2.66
 3.01 Init + 151683 151780   98  2  2   68  114    12 0.352   1.67
 3.02 Intr + 152527 152646  120  1  0   74   92    63 0.408   4.91
 3.03 Term + 154221 154320  100  0  1   29   52   126 0.366   0.70
 3.04 PlyA + 154850 154855    6                               1.05

 4.08 PlyA - 160669 160664    6                               1.05
 4.07 Term - 161877 161732  146  1  2   54   34   287 0.984  17.97
 4.06 Intr - 162241 161992  250  1  1   53  -10   404 0.080  24.11
 4.05 Intr - 169911 169755  157  2  1   89   62    42 0.006   1.71
 4.04 Intr - 180205 180138   68  1  2  104   72    64 0.424   4.10
 4.03 Intr - 188115 187972  144  0  0  101   65    38 0.385   3.28
 4.02 Intr - 189037 188938  100  0  1   38   64    45 0.222  -2.79
 4.01 Init - 193816 193677  140  1  2   40   89    99 0.404   4.81
 4.00 Prom - 194973 194934   40                              -5.76

 5.03 PlyA - 195536 195531    6                               1.05
 5.02 Term - 207499 207345  155  2  2   43   48   162 0.610   5.78
 5.01 Init - 208789 208762   28  1  1   84  100    31 0.711   3.66
 5.00 Prom - 210171 210132   40                              -3.86

 6.06 PlyA - 210602 210597    6                               1.05
 6.05 Term - 212872 212623  250  0  1  142   47   138 0.924  10.28
 6.04 Intr - 217206 217053  154  1  1   34   75    82 0.719   0.63
 6.03 Intr - 217553 217463   91  2  1   61   92    42 0.876   1.47
 6.02 Intr - 217969 217857  113  2  2   24   75   100 0.584   2.40
 6.01 Init - 218430 218346   85  0  1   66   64    77 0.611   4.10
 6.00 Prom - 220047 220008   40                              -4.86

 7.00 Prom + 220169 220208   40                              -4.76
 7.01 Init + 220951 221092  142  0  1   86   60    91 0.841   6.40
 7.02 Term + 224788 224852   65  2  2   98   45    59 0.772   0.65
 7.03 PlyA + 225930 225935    6                              -0.45

 8.06 PlyA - 226312 226307    6                               1.05
 8.05 Term - 227880 227743  138  0  0   80   40    78 0.560   0.16
 8.04 Intr - 229441 229383   59  2  2  118   87    21 0.499   3.60
 8.03 Intr - 230653 230497  157  1  1   60  110    41 0.961   3.08
 8.02 Intr - 231007 230893  115  0  1   46   49   151 0.991   7.45
 8.01 Init - 232340 232273   68  2  2   68   94    51 0.691   4.24
 8.00 Prom - 268095 268056   40                              -1.46


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577f:33973701_34242597|GENSCAN_predicted_peptide_1|380_aa
MVEGQGRVRHFTWLEQEEAKLTWKPGKHHLHGSAPLTSTGEEALDLTGSVVRKEYGRTDS
WLTKTTSVADDMVCSQMLLQSEGTHSPAVRKLTGDGSQEAVRVLRKQKCDLINMLFEKDH
SGSPRVEEGRPGSVRQMRKLNHRVQLLVQGYTVIGHRRSGFGSMLLTTKLYCCQLATFEQ
RIQGQKGKKEPDTGTKETKENPKSTGSWMAKKRPSGLQRGSRPKVTQCQGTESDPSPRAA
AHGLCQRAPRRVGGLVSRVRPESCGWGRELHPPTDPGRECSRTPASSRWPHSPRAGRDPA
LRREAASAFKPGLALSDRAFAAWEPSGAAVSRSPLSPPSRPFASREPAGFRAALADPPGM
PRYELALILKAMQRPEIQIL

>gi568815577f:33973701_34242597|GENSCAN_predicted_CDS_1|1143_bp
atggtggaaggccaagggcgagtgaggcacttcacgtggctggagcaggaggaagccaaa
ctcacctggaagccaggaaaacaccatctgcatgggtcagccccactgaccagcacaggg
gaagaagcactggatctgactggctcagtggtccgtaaggaatacggcaggaccgactcc
tggctgacaaagacaacttctgtagcagatgatatggtgtgctctcagatgctgcttcag
agtgaaggcactcattccccggctgtcaggaagctgactggtgatgggtcacaggaggca
gttagagttttacgtaaacagaaatgtgatctgatcaacatgctgtttgagaaggaccac
tctgggagcccgagagtagaagagggaagacccgggtcagtgaggcagatgaggaaactg
aaccacagagttcagttacttgttcaagggtacacagtcattggacacaggcggtctggc
tttggctccatgctcttgaccaccaagctgtactgctgccaactagccacctttgaacag
cgcattcagggacagaaggggaaaaaggagccagacacagggaccaaggagacaaaggaa
aaccccaagagtacaggatcatggatggccaagaagagaccctcaggactgcagagaggc
agcaggcccaaggtcacgcagtgccaagggactgagtcagacccgagcccgcgcgccgcg
gcccacggcctgtgccagcgcgctcctcgccgggtagggggcctggtcagccgcgtcaga
cctgagagttgtggctgggggcgagagctgcacccccctaccgaccccgggcgggaatgt
tccagaacccctgcgagcagccgttggccgcacagcccccgggccggccgcgaccccgcc
ttgcgccgcgaagctgccagcgcctttaagcccgggctcgcgctctcggaccgtgctttc
gccgcctgggagccgtccggcgcagcagtttctaggtccccactgtccccgccgtcccgc
cccttcgcgtcccgggaaccggctggcttccgagccgcactcgccgatcctccaggcatg
ccccgctacgagctggctttaatcctgaaagccatgcagcggccagaaatccagatttta
tag

>gi568815577f:33973701_34242597|GENSCAN_predicted_peptide_2|718_aa
MRAVLDTADIAIVALYFILVMCIGFFAMWKSNRSTVSGYFLAGRSMTWVAIGASLFVSNI
GSEHFIGLAGSGAASGFAVGAWEFNALLLLQLLGWVFIPIYIRSGVYTMPEYLSKRFGGH
RIQVYFAALSLILYIFTKLSVDLYSGALFIQESLGWNLYVSVILLIGMTALLTVTGGLVA
VIYTDTLQALLMIIGALTLMIISIMEIGGFEEVKRRYMLASPDVTSILLTYNLSNTNSCN
VSPKKEALKMLRNPTDEDVPWPGFILGQTPASVWYWCADQVIVQRVLAAKNIAHAKGSTL
MAGFLKLLPMFIIVVPGMISRILFTDDIACINPEHCMLVCGSRAGCSNIAYPRLVMKLVP
VGLRGLMMAVMIAALMSDLDSIFNSASTIFTLDVYKLIRKSASSRELMIVGRIFVAFMVV
ISIAWVPIIVEMQGGQMYLYIQEVADYLTPPVAALFLLAIFWKRCNEQGAFYGGMAGFVL
GAVRLILAFAYRAPECDQPDNRPGFIKDIHYMYVATGLFWVTGLITVIVSLLTPPPTKEQ
IRTTTFWSKKNLVVKENCSPKEEPYKMQEKSILRCSENNETINHIIPNGKSEDSIKGLQP
EDVNLLVTCREEGNPVASLGHSEAETPVDAYSNGQAALMGEKERKKETDDGGRYWKFIDW
FCGFKSKSLSKRSLRDLMEEEAVCLQMLEETRQVKVILNIGLFAVCSLGIFMFVYFSL

>gi568815577f:33973701_34242597|GENSCAN_predicted_CDS_2|2157_bp
atgagagctgtactggacacagcagacattgccatagtggccctgtattttatcctggtc
atgtgcattggtttttttgccatgtggaaatctaatagaagcaccgtgagtggatacttc
ctggcggggcgctctatgacctgggtagcaattggtgcctctctgtttgtgagcaatatt
gggagtgagcacttcattgggctggcaggatctggagctgcaagtggatttgcagtgggc
gcatgggaattcaatgccttactgcttttacaacttctgggatgggttttcatcccaatt
tacatccggtcaggggtatataccatgcctgaatacttgtccaagcgatttggtggccat
aggattcaggtctattttgcagccttgtctctgattctctatattttcaccaagctctcg
gtggatctgtattcgggtgccctttttatccaggagtctttgggttggaatctttatgtg
tctgtcatcctgctcattggcatgactgctttgctgactgtcaccggaggccttgttgca
gtgatctacacagacactctgcaggctctgctcatgatcattggggcacttacacttatg
attattagcataatggagattggcgggtttgaggaagttaagagaaggtacatgttggcc
tcacccgatgtcacttccatcttattgacatacaacctttccaacacaaattcttgtaat
gtctcccctaagaaagaagccctgaaaatgctgcggaatccaacagatgaagatgttcct
tggcctggattcattcttgggcagaccccagcttcagtatggtactggtgtgctgaccaa
gtcatcgtgcagagggtccttgcagccaaaaacattgctcatgccaaaggctctactctt
atggctggcttcttaaagctcctgccaatgtttatcatagttgtcccaggaatgatttcc
aggatactgtttactgatgatatagcttgcatcaacccagagcactgcatgctggtgtgt
ggaagcagagctggttgctccaatattgcttacccacgcctggtgatgaagctggttcct
gtgggccttcggggtttaatgatggcagtgatgattgcagctctgatgagtgacttagac
tctatctttaacagtgccagtaccatattcaccctcgatgtgtacaaacttatccgcaag
agcgcaagctcccgggagttaatgattgtggggaggatatttgtggcatttatggtggtg
atcagcatagcatgggtgccaatcatcgtggagatgcaaggaggccagatgtacctttac
attcaggaggtagcagattacctgacacccccagtggcagccttgttcctgctggcaatt
ttctggaagcgctgcaatgaacaaggggctttctatggtggaatggctggctttgttctt
ggagcagtccgtttgatactggcctttgcctaccgtgccccagaatgtgaccaacctgat
aataggccgggcttcatcaaagacatccattatatgtatgtggccacaggattgttttgg
gtcacgggactcattactgtaattgtgagccttctcacaccacctcccacaaaggaacag
attcgaaccaccaccttttggtctaagaagaacctggtggtgaaggagaactgctcccca
aaagaggaaccatacaaaatgcaagaaaagagcattctgagatgcagtgagaataatgag
accatcaaccacatcattcccaacgggaaatctgaagacagcattaagggccttcagcct
gaagatgttaatctgttggtaacctgcagagaggagggcaacccagtggcatccttaggt
cattcagaggcagaaacaccagttgacgcttactccaatgggcaagcagctctcatgggt
gagaaagagagaaagaaagaaacggatgatggaggtcggtactggaagttcatagactgg
ttttgtggctttaaaagtaagagcctcagcaagaggagtctcagagacctgatggaagag
gaggctgtttgtttacagatgctagaagagactcggcaagttaaagtaatactaaatatt
ggactttttgctgtgtgttcacttggaattttcatgtttgtttatttctccttatga

>gi568815577f:33973701_34242597|GENSCAN_predicted_peptide_3|105_aa
MDRGAIVRDLENLGERALPYRISAHSQQHNRGGTQVMGLPSALPQGPSKTVSADVLCDEN
AACSYVSRAVLCSPRGYDTYPKLRQGADLKPDSGVREPAFGWLME

>gi568815577f:33973701_34242597|GENSCAN_predicted_CDS_3|318_bp
atggacagaggagcaatagtgagggacttggaaaacctgggtgaacgagcgcttccttat
aggatctctgcccacagtcagcagcacaacagaggcggaactcaggttatgggtctccca
tctgcattgccacaaggacccagcaagacagtctctgcagatgtgctctgcgacgagaat
gctgcttgtagttatgtgagtcgagctgtcttgtgcagccctagaggctatgacacgtat
ccgaaattacggcaaggcgctgatttgaaacctgacagtggtgtgcgagagccagctttt
ggctggctaatggagtga

>gi568815577f:33973701_34242597|GENSCAN_predicted_peptide_4|334_aa
MFVGKHRNHTAADSCHHYRTLLCYPTSSAFCRKQHPSENATVAPATCNLQLQLRKNKRDG
KCKNLDQYSSSEQLSCKSCQVIVSLYYGTLPSDASSKLERVNFPNLKLVGLGLGSGEGNP
EAQHAGKREKSSFLLVGMTIKLHDHFDDAAGDSQNRHFPQHFMCRSSVICDGDRHLVQGT
PWEGGRASQVFPISPEETEEEMQDSIAVKEKYAKYLPHNAGPYAAKRFCKAQCPIVESLT
NSMIMHGHNNSKKLMTVRIIKYAFHFIHLLTGENPHLQVLVNTIINGTLEGALREIMTIA
ECLADELITATKGSSNSFAIKKKDELACVAKSNR

>gi568815577f:33973701_34242597|GENSCAN_predicted_CDS_4|1005_bp
atgtttgttggaaaacatcgaaaccacactgcagctgattcttgtcaccattaccgcacc
ctgctgtgctacccgacgtcaagtgcattctgcaggaagcagcacccctctgaaaatgcc
actgtggcaccagctacatgcaatctccagctgcagctcagaaagaacaagagggatggg
aaatgtaaaaatctggatcaatattctagttctgagcagttatcctgcaaatcctgccag
gtaattgtgtctctgtactatgggaccctcccctcagatgcatcctccaaactggaaaga
gttaatttcccaaaccttaaactggttggcttaggactgggttcaggggaaggaaaccca
gaagcccaacatgccggcaaaagggaaaaatcaagttttttgctggtgggaatgaccatc
aaactgcatgaccattttgatgatgcagcaggagattcccagaaccggcacttcccccaa
cattttatgtgcagaagttccgtcatctgtgatggtgacagacaccttgtgcagggcacc
ccctgggaagggggaagggctagtcaagtctttccaatcagccccgaggagaccgaggaa
gagatgcaggattccattgcagtgaaggagaagtatgccaagtacctgcctcacaatgca
gggccttatgctgccaaacgcttctgcaaagctcagtgccccattgtggagtccctcact
aactccatgataatgcatggccacaacaacagcaagaagctcatgactgtgcgcatcatc
aagtatgccttccatttcatccacctgctcacaggcgagaaccctcacctccaggtcctg
gtgaacaccatcatcaatggcactcttgagggtgccctccgggagatcatgaccattgct
gagtgcctggcagatgagctcatcactgccaccaagggctcctccaactcctttgccatc
aagaagaaggatgagctggcatgtgtggccaagtccaaccgctga

>gi568815577f:33973701_34242597|GENSCAN_predicted_peptide_5|60_aa
MAGVEDGSEATVTYNPSVKGRNFPMQKQQKVNRGNIAMSKGSSTQYLRLCYKATQRVDEK

>gi568815577f:33973701_34242597|GENSCAN_predicted_CDS_5|183_bp
atggctggtgtggaagatgggtcagaagcaacggtgacatataatcccagtgttaaagga
cggaattttccaatgcagaagcagcagaaagtgaacagaggaaacattgccatgagcaaa
ggctcctcaacacagtatctccgactgtgctacaaagccacccagcgtgtggatgaaaag
tga

>gi568815577f:33973701_34242597|GENSCAN_predicted_peptide_6|230_aa
MANGTRAGWLLRTTHGVECDQTMSARIKETKSSAFRSMKTTHYPIREMPVTEMPVEIGSF
WLQAELAQVPICCHIFAVSAQPFLFWHEFTGSCRTREQLKMYKHCFSHLPLTFNEILLKY
NQDDTSSIFNSSTMALACQSGYREDQSRCVYIDTYSCLANEVQGHLHRLPAHRTAGPLRP
GTRAISVTLFPELGTEEVGNWYWSSNQLCSLTLRPAFAIKTAQFCEPYKP

>gi568815577f:33973701_34242597|GENSCAN_predicted_CDS_6|693_bp
atggccaatggcaccagggctggctggctgctgaggacaactcatggagtggaatgtgac
cagacaatgtcagcacgcatcaaagagacaaaaagcagtgcttttcgaagtatgaaaact
acccattatcccattagagagatgccggttacagagatgccggtggaaatcggaagcttc
tggcttcaggcagaactagcacaagttcccatctgctgccacatctttgcagtatcagct
cagcctttcctcttctggcacgagttcacaggctcctgtagaaccagagagcagttgaag
atgtataaacattgcttctcccatcttccactcactttcaatgaaatactacttaaatac
aatcaggacgacacatcttcaatatttaacagctcgactatggccctggcctgccagagt
ggatatcgtgaagaccagagcaggtgtgtgtacatagatacatactcgtgtttagctaat
gaagtacaaggtcacctgcacaggctgcctgcccaccggactgctggccccttgaggcca
ggaaccagggccatctctgtcaccctcttcccagagcttggcaccgaggaggtgggaaat
tggtactggtcctctaatcagctctgctccctaaccctgcgaccagccttcgccatcaag
acggctcagttctgtgaaccgtacaaaccatga

>gi568815577f:33973701_34242597|GENSCAN_predicted_peptide_7|68_aa
MERLGTPYPKCGLWASSTCVIWELVRNGILSRSQTLLHQNLHFNEIPGLSLAAKRLSVFA
DLQKGARS

>gi568815577f:33973701_34242597|GENSCAN_predicted_CDS_7|207_bp
atggagcgtctaggaactccctacccaaagtgtggtctgtgggccagcagcacctgcgtc
atctgggaacttgtaagaaatgggattcttagcagatcccagaccctgctgcatcagaac
ctgcattttaatgagatcccaggcctttctttagctgctaaaaggctgtcggtctttgct
gatttgcagaaaggtgcacgctcatga

>gi568815577f:33973701_34242597|GENSCAN_predicted_peptide_8|178_aa
MRKWFMYYDEKISKMHCQLKTVRRPFITLWLEDHLQQPLLCAGNTEQHVRGCQGLLATWA
WQVCGLPKAKDPCYISGYSQSSQRSREHTASPAINACWLPARIQAKNGVALRPDSLGPTV
PHPCPMQMAEETIGRTRNAEGGRKLELRGVDLIVQAEMPTFKLKDAARQDAWLSSVFK

>gi568815577f:33973701_34242597|GENSCAN_predicted_CDS_8|537_bp
atgaggaaatggtttatgtactatgatgaaaagatctctaagatgcactgtcaactgaaa
acagtgaggaggccttttatcaccctgtggctggaggaccatctgcagcagcccctgctg
tgcgctggcaacactgagcagcatgtgcgcggctgccaggggctgctggccacctgggcc
tggcaagtctgtggcctccccaaagctaaggatccctgttatatctccggatattcacag
agctcccagcgcagccgagaacacacagccagccctgcaataaatgcttgttggttgcct
gccaggatccaagctaaaaatggagttgccttacggccagatagcttggggcccacagtt
ccccacccctgcccgatgcagatggcagaagaaaccattggtcgaacaagaaatgcagaa
ggtggcaggaaattagaactaaggggagtggaccttattgtgcaggctgaaatgcccacc
ttcaagttaaaagatgcagcaagacaagacgcctggctcagcagcgtgttcaaatag