GENSCAN 1.0	Date run: 16-Jul-119	Time: 16:09:05

Sequence gi568815596r:207666985_207868739 : 201755 bp : 43.80% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12141  12225   85  2  1   61   53    69 0.690   1.68
 1.02 Intr +  13471  13518   48  2  0   70   79    44 0.502   0.35
 1.03 Term +  14717  15111  395  0  2   39   43   557 0.356  41.50
 1.04 PlyA +  17107  17112    6                               1.05

 2.00 Prom +  30768  30807   40                              -5.06
 2.01 Init +  44913  45132  220  2  1   51  116   410 0.990  38.89
 2.02 Intr +  57816  57890   75  1  0  102   95    -4 0.160   1.19
 2.03 Intr +  59858  59892   35  0  2   61  103     7 0.180  -2.56
 2.04 Intr +  70427  70462   36  1  0  108   99   -11 0.004   0.46
 2.05 Intr +  75239  75358  120  1  0  117   91    25 0.982   6.39
 2.06 Intr +  80063  80229  167  1  2   76   84   165 0.980  13.66
 2.07 Intr +  83973  84135  163  0  1  121   94    98 0.972  13.68
 2.08 Term +  86604  86714  111  2  0   66   42    53 0.660  -2.94
 2.09 PlyA +  87463  87468    6                               1.05

 3.02 PlyA -  89110  89105    6                               1.05
 3.01 Sngl - 101755  99998 1758  1  0   94   49  3606 0.993 350.00
 3.00 Prom - 113133 113094   40                              -5.26

 4.00 Prom + 117510 117549   40                              -5.26
 4.01 Init + 143078 143181  104  1  2   56   99    19 0.296  -0.47
 4.02 Intr + 143944 144142  199  1  1   58   82   122 0.841   7.95
 4.03 Term + 150866 150937   72  1  0   70   39    80 0.648  -0.79
 4.04 PlyA + 152463 152468    6                               1.05

 5.03 PlyA - 152658 152653    6                               1.05
 5.02 Term - 161512 161335  178  0  1   94   41   127 0.816   5.76
 5.01 Init - 164410 164304  107  1  2   77   82    89 0.799   4.89
 5.00 Prom - 173532 173493   40                              -1.36

 6.04 PlyA - 174573 174568    6                               1.05
 6.03 Term - 181478 181411   68  0  2   79   39    77 0.243  -0.00
 6.02 Intr - 183429 183359   71  2  2   66   82    22 0.110  -1.77
 6.01 Intr - 194278 194121  158  1  2  128   92    77 0.890  10.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  66963  67063  101  2  2  135  101    33 0.989   8.21
S.002 Intr +  73671  73722   52  0  1   90   98     5 0.982   0.61


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:207666985_207868739|GENSCAN_predicted_peptide_1|175_aa
MCFFMVLEAGKSLIKTPADVVSMESLCSGKLMSREFGVRIFHYPGEGPGGADDEGPVRRQ
VKVTVKYDRKELRKRLNLEEWILEQLTRLYDCQEEEIPELEIDVDELLDMESDDARTARV
KELLVDLLQTHRDLHLWPAGQDPGHAEAEHTPEEVRVPDPGERWLPQDNCCPSTS

>gi568815596r:207666985_207868739|GENSCAN_predicted_CDS_1|528_bp
atgtgtttcttcatggttctggaggctgggaagtctttgatcaagacgccagcagatgtg
gtgtctatggagagcctgtgttctggtaaactcatgtcacgagaatttggtgtacgaata
tttcattacccaggagagggcccgggcggcgcggacgatgagggcccagtgaggcgccaa
gtgaaggtcaccgtcaagtatgaccgcaaggagctacggaagcgccttaacctagaggag
tggatcctggagcagctcacgcgcctctacgactgccaggaagaggagatcccagaactg
gaaattgacgtggatgagctcctggacatggagagtgacgatgcccgtactgccagggtc
aaggagctgctggttgacttgttacaaacccacagagaccttcatctctggcctgctgga
caagatccggggcatgcagaagctgagcacaccccagaagaagtgagggtccccgaccca
ggcgaacggtggctcccacaggacaattgctgcccctcgacctcgtag

>gi568815596r:207666985_207868739|GENSCAN_predicted_peptide_2|308_aa
MGNTLTCCVSPNASPKLGRRAGSAELYCASDIYEAVSGDAVAVAPAVVEPAELDFGEGEG
HHLQHISDREMPEDLALESNPSDHPRASTIFLSKSQTDVREKRKSNHLNHCDLSNILPHK
EQREKVPEEYFKHDPEHKFIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPTN
WKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVPASVY
AKYYFDLRSLADDNNLNFLFAPLSKERAQNLEAISRLCEDKDLCRAAMRRSFSADNFIGI
QRSKAILS

>gi568815596r:207666985_207868739|GENSCAN_predicted_CDS_2|927_bp
atggggaacacgctgacctgttgcgtgtcccccaatgccagccccaagctgggccggcgc
gcggggtcggcggagctgtactgcgcgtccgacatctacgaggcggtgtccggggacgcg
gtggcggtagcgcccgctgtggtggagcctgccgagttggatttcggagagggcgagggc
caccacctgcagcacatcagcgaccgcgagatgcccgaagatttagctttggagtcaaac
ccttctgaccatccaagggcaagcacaattttcctgagcaaatctcaaacggatgtgcga
gaaaagaggaagagcaaccatttgaaccattgtgaccttagcaatatattaccacataaa
gaacagcgagaaaaagttccagaggaatactttaagcatgatcctgagcacaaatttatt
tacagatttgttcgtactctttttagtgctgcacagctaacagctgaatgtgcaatagta
actttggtttacttagaaaggcttttaacttatgctgaaatcgacatttgtcccaccaac
tggaaaaggattgttctgggagccattcttcttgcctccaaggtttgggacgatcaggct
gtatggaatgtggactactgccagatcctcaaggacattacagttgaggacatgaatgaa
atggaaaggcattttctggagcttcttcagtttaatattaatgttcctgccagtgtttat
gccaaatactactttgaccttcgctccttagcagatgacaacaacctgaattttctattt
gctcctcttagcaaagaaagagcacagaacctagaggctatttctagattgtgtgaagac
aaagacttgtgtagagccgctatgagaaggtctttcagtgctgataacttcattggtatt
cagcgctctaaagccatcctctcttaa

>gi568815596r:207666985_207868739|GENSCAN_predicted_peptide_3|585_aa
MARPDPSAPPSLLLLLLAQLVGRAAAASKAPVCQEITVPMCRGIGYNLTHMPNQFNHDTQ
DEAGLEVHQFWPLVEIQCSPDLRFFLCSMYTPICLPDYHKPLPPCRSVCERAKAGCSPLM
RQYGFAWPERMSCDRLPVLGRDAEVLCMDYNRSEATTAPPRPFPAKPTLPGPPGAPASGG
ECPAGGPFVCKCREPFVPILKESHPLYNKVRTGQVPNCAVPCYQPSFSADERTFATFWIG
LWSVLCFISTSTTVATFLIDMERFRYPERPIIFLSACYLCVSLGFLVRLVVGHASVACSR
EHNHIHYETTGPALCTIVFLLVYFFGMASSIWWVILSLTWFLAAGMKWGNEAIAGYAQYF
HLAAWLIPSVKSITALALSSVDGDPVAGICYVGNQNLNSLRGFVLGPLVLYLLVGTLFLL
AGFVSLFRIRSVIKQGGTKTDKLEKLMIRIGIFTLLYTVPASIVVACYLYEQHYRESWEA
ALTCACPGHDTGQPRAKPEYWVLMLKYFMCLVVGITSGVWIWSGKTVESWRRFTSRCCCR
PRRGHKSGGAMAAGDYPEASAALTGRTGPPGPAATYHKQVSLSHV

>gi568815596r:207666985_207868739|GENSCAN_predicted_CDS_3|1758_bp
atggctcggcctgacccatccgcgccgccctcgctgttgctgctgctcctagcgcagctg
gtgggccgggcggccgccgcgtccaaggccccggtgtgccaggaaatcacggtgcccatg
tgccgcggcatcggctacaacctgacgcacatgcccaaccagttcaaccacgacacgcag
gacgaggcgggcctggaggtgcaccagttctggccgctggtggagatccaatgctcgccg
gacctgcgcttcttcctatgctctatgtacacgcccatctgtctgcccgactaccacaag
ccgctgccgccctgccgctcggtgtgcgagcgcgccaaggccggctgctcgccgctgatg
cgccagtacggcttcgcctggcccgagcgcatgagctgcgaccgcctcccggtgctgggc
cgcgacgccgaggtcctctgcatggattacaaccgcagcgaggccaccacggcgcccccc
aggcctttcccagccaagcccacccttccaggcccgccaggggcgccggcctcggggggc
gaatgccccgctgggggcccgttcgtgtgcaagtgtcgcgagcccttcgtgcccattctg
aaggagtcacacccgctctacaacaaggtgcggacgggccaggtgcccaactgcgcggta
ccctgctaccagccgtccttcagtgccgacgagcgcacgttcgccaccttctggataggc
ctgtggtcggtgctgtgcttcatctccacgtccaccacagtggccaccttcctcatcgac
atggaacgcttccgctatcctgagcgccccatcatcttcctgtcagcctgctacctgtgc
gtgtcgctgggcttcctggtgcgtctggtcgtgggccatgccagcgtggcctgcagccgc
gagcacaaccacatccactacgagaccacgggccctgcactgtgcaccatcgtcttcctc
ctggtctacttcttcggcatggccagctccatctggtgggtcatcctgtcgctcacctgg
ttcctggccgccggcatgaagtggggcaacgaggccatcgcgggctacgcgcagtacttc
cacctggctgcgtggctcatccccagcgtcaagtccatcacggcactggcgctgagctcc
gtggacggggacccagtggccggcatctgctacgtgggcaaccagaacctgaactcgctg
cgcggcttcgtgctgggcccgctggtgctctacctgctggtgggcacgctcttcctgctg
gcgggcttcgtgtcgctcttccgcatccgcagcgtcatcaagcagggcggcaccaagacg
gacaagctggagaagctcatgatccgcatcggcatcttcacgctgctctacacggtcccc
gccagcattgtggtggcctgctacctgtacgagcagcactaccgcgagagctgggaggcg
gcgctcacctgcgcctgcccgggccacgacaccggccagccgcgcgccaagcccgagtac
tgggtgctcatgctcaagtacttcatgtgcctggtggtgggcatcacgtcgggcgtctgg
atctggtcgggcaagacggtggagtcgtggcggcgtttcaccagccgctgctgctgccgc
ccgcggcgcggccacaagagcgggggcgccatggccgcaggggactaccccgaggcgagc
gccgcgctcacaggcaggaccgggccgccgggccccgccgccacctaccacaagcaggtg
tccctgtcgcacgtgtag

>gi568815596r:207666985_207868739|GENSCAN_predicted_peptide_4|124_aa
MRMARPATTFAGPVQNANVETLLLKNYSEFQDGDRGHYQKVSLFISWWNQDVPLLRGVVV
VREPVCNEVSAKSTGQFHNTAERGEKEVNVPSSTTRQKGKPTDNPVIAAVAAPDVLSIVG
MEIE

>gi568815596r:207666985_207868739|GENSCAN_predicted_CDS_4|375_bp
atgagaatggcaagaccagccaccacatttgcagggcctgtgcaaaatgcaaacgtggag
acccttttgctcaaaaattattcagaatttcaagatggagacaggggtcattatcagaag
gtttcacttttcatttcctggtggaatcaggacgtgccccttttgcggggagtggtggtg
gtgagggagccggtgtgcaatgaggtgtctgccaagagcacagggcaattccacaacaca
gcagagaggggtgaaaaggaagtgaacgtgccctcctccactaccagacaaaaagggaaa
ccgactgataatccagttattgccgctgtggctgcacctgatgtgctcagcattgtggga
atggagatagaatag

>gi568815596r:207666985_207868739|GENSCAN_predicted_peptide_5|94_aa
MARPQPAAWCSVRALAGLPGALGSSHNSVSNSLRPRCESCGAVFHSECKEKSVPCPRCVR
RELQKKQKSFWQRLNMDESLEEACTMFELSYQNT

>gi568815596r:207666985_207868739|GENSCAN_predicted_CDS_5|285_bp
atggccaggcctcagccggcagcgtggtgctcggtaagagccttggctgggctgccagga
gccctgggttccagtcacaactctgtctccaactcactgcgtccccggtgtgaaagctgt
ggagccgttttccattctgaatgcaaagaaaagtctgtcccctgcccgaggtgtgttcgc
cgagagctgcagaagaagcagaagtctttctggcagagactgaacatggacgagagtcta
gaggaggcttgcaccatgttcgagctgtcctaccagaacacctga

>gi568815596r:207666985_207868739|GENSCAN_predicted_peptide_6|98_aa
VIEGKLAPFLGKVIKFATSHVYSCSLCSQKGFICEICNNGEILYPFEDISTSRFFTMKNI
VLKDFVTFMPLGTVFKYLPLGTVHGEGSMEAECGDDFA

>gi568815596r:207666985_207868739|GENSCAN_predicted_CDS_6|297_bp
gtaatagagggaaagctggctccattcttgggcaaggtcattaaatttgccacctcacac
gtgtacagctgcagtctttgtagccagaaggggttcatctgtgaaatctgtaacaatgga
gagatcctctacccttttgaggatatttcaacaagcaggtttttcactatgaagaacatt
gtacttaaagactttgtgacctttatgccacttggcactgtatttaaatatttgcccctg
ggcacagtgcatggagaaggctccatggaggctgaatgtggagatgattttgcctaa