GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:24:43

Sequence gi568815596f:138450217_138669077 : 218861 bp : 38.24% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6466   6571  106  0  1   44   53   122 0.085   4.73
 1.02 Intr +  11177  11283  107  0  2   48   82    53 0.146  -0.29
 1.03 Term +  12928  13053  126  0  0   87   42   102 0.387   2.80
 1.04 PlyA +  13382  13387    6                               1.05

 2.08 PlyA -  15337  15332    6                               1.05
 2.07 Term -  19402  19151  252  1  0   29   37   181 0.046   1.75
 2.06 Intr -  44329  44161  169  0  1   61   36    60 0.034  -2.87
 2.05 Intr -  46267  46083  185  1  2  126   71    94 0.067   9.16
 2.04 Intr -  54264  54105  160  2  1   36   75    51 0.001  -2.33
 2.03 Intr -  55841  55628  214  0  1   68   50    91 0.003   0.15
 2.02 Intr -  61653  61558   96  1  0    7  105    76 0.025   0.26
 2.01 Init -  74614  74509  106  1  1   63   98    87 0.570   7.63
 2.00 Prom -  85558  85519   40                              -5.05

 3.04 PlyA -  85750  85745    6                               1.05
 3.03 Term -  86650  86534  117  1  0   71   48    84 0.365   0.26
 3.02 Intr -  90281  90114  168  2  0   18   86   105 0.324   2.52
 3.01 Init -  91285  91106  180  1  0   70   41   134 0.502   6.13
 3.00 Prom -  92227  92188   40                              -6.15

 4.02 PlyA -  92396  92391    6                               1.05
 4.01 Sngl -  93639  93250  390  0  0   88   54   401 0.967  32.67
 4.00 Prom -  99547  99508   40                              -5.55

 5.00 Prom +  99728  99767   40                              -4.35
 5.01 Init + 100330 100388   59  0  2   67   95    13 0.456   0.73
 5.02 Intr + 100687 100838  152  1  2   81  106    71 0.994   7.09
 5.03 Intr + 102338 102465  128  0  2   81   90    41 0.984   3.08
 5.04 Intr + 108806 108983  178  1  1   83   80    91 0.906   6.37
 5.05 Intr + 109066 109121   56  2  2   66   92    46 0.894   0.58
 5.06 Intr + 110589 110711  123  2  0   61  106   115 0.996  10.46
 5.07 Intr + 114492 114634  143  2  2   32   87   137 0.890   6.23
 5.08 Term + 118720 118864  145  1  1   65   44   145 0.980   4.20
 5.09 PlyA + 119948 119953    6                               1.05

 6.02 PlyA - 120193 120188    6                               1.05
 6.01 Sngl - 125814 125161  654  0  0   54   49   260 0.682  14.62
 6.00 Prom - 131757 131718   40                              -2.85

 7.00 Prom + 149311 149350   40                              -4.75
 7.01 Init + 154249 154343   95  0  2   78   89    35 0.224   2.57
 7.02 Intr + 159266 159363   98  2  2   73   96    12 0.189  -0.77
 7.03 Intr + 162551 162715  165  0  0   73   44   184 0.546  11.51
 7.04 Intr + 166121 166257  137  0  2   35   15   151 0.485   1.87
 7.05 Intr + 169396 169481   86  0  2   16   23   154 0.112  -0.60
 7.06 Intr + 171967 172094  128  1  2   50   80    53 0.128   0.10
 7.07 Intr + 187559 187704  146  0  2  104   33    75 0.149   2.68
 7.08 Intr + 200468 200554   87  1  0   79   84    62 0.290   4.15
 7.09 Intr + 212371 212509  139  0  1  148   72    -6 0.056   2.92
 7.10 Term + 215880 216040  161  1  2   77   42    59 0.019  -2.68
 7.11 PlyA + 216141 216146    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:138450217_138669077|GENSCAN_predicted_peptide_1|112_aa
MASKTSTQENQCTKHNYNQGPSQSPRHSLTTSTGAGLHMPWWFAAPINPSSTLGISSDAI
PPLTPIPHQAPVMLMEEVGSHGLTQYLTKELKDLYNKNYKTLLKEIIDDTNK

>gi568815596f:138450217_138669077|GENSCAN_predicted_CDS_1|339_bp
atggctagcaaaactagcactcaagaaaaccagtgcactaaacacaactacaaccaagga
ccttcacagagtccacgacactcccttactacctccactggagcaggtctacacatgcca
tggtggtttgctgcacccatcaacccgtcatctacattaggtatttcttctgatgctatc
cctcccctaactcccattcctcatcaggccccggtcatgctgatggaagaggtgggctcc
catggccttacacaatacctaaccaaggagttgaaagacctctacaacaaaaactacaaa
acactgctgaaagaaatcatagatgacacaaacaaataa

>gi568815596f:138450217_138669077|GENSCAN_predicted_peptide_2|393_aa
MLNGFDQNANNDMDNEIQAEVVSDGDEECVRNYSKGWLYAPSLYALMPGELWSKADLRLS
RLDFILGGLSTKCLAWILAMVICSSLFPINQPHVLKFSSYWTFQVQKVEIANITWVTTVH
PLGFCLKVISSEKHSLMDCSISFKSLILGELFFFNLPCLYKFMAKNADIDIRKAKKLNVG
RNYVEAVRDENQVTEKEELWLALEPGYRPRGSLKLSTLFSQRPPASAPALIGSRGATDRS
PPLLSLLSHHHVSRCLLTFPCALSVSFSKGAFYESVTCGIPATLLCGFSDQLYRLRTCTR
KPKYPQQLPQSLSQEPLGAFLMATAAWLTTVFKQPGCAPELHWASFHNYGSVSITLISEC
GRHLNKNHESHFTNQDTQDVRLSDLSYQGHKAS

>gi568815596f:138450217_138669077|GENSCAN_predicted_CDS_2|1182_bp
atgttgaatggctttgaccaaaatgctaataatgatatggacaatgaaatccaggctgag
gtggtctcagatggagatgaggaatgtgttaggaactacagcaaagggtggctgtatgct
cctagtctctatgctctgatgcctggagagctctggagtaaagcagacctacgtttgtcc
agacttgacttcattttgggaggattaagtacaaaatgcttagcgtggattttggccatg
gtgatctgctccagtctattccccatcaaccaacctcacgtgctgaagttcagttcttac
tggaccttccaggtccagaaagttgaaattgccaacatcacttgggtcactacagttcat
cctttaggtttctgtctaaaagtcatttcttcagagaagcattccctaatggattgttct
ataagctttaaaagtctgattctaggggagttatttttcttcaacctgccctgtttatat
aaattcatggccaaaaatgcagatatagacattaggaaagccaagaaactaaatgttgga
aggaactatgtggaagcagtgagagatgaaaatcaggtaacagagaaagaggagttgtgg
ttggccctggaacctggatacagacccaggggaagtctaaagctctccactctgttcagc
cagaggccaccagcctctgcaccagccctaattggctctagaggtgcaactgatcggtct
cctcctcttttatctctgctcagtcatcaccatgtctccaggtgcctgcttacatttccc
tgtgctttgagtgtctccttctctaaaggagccttttatgagtcagttacatgtggcatc
cctgctacacttctctgtggcttttctgatcagttatacagattaagaacatgtacaaga
aagccaaaatatccccagcaattaccccagtctttatcacaggaaccactgggtgccttt
ctcatggccacagcagcttggcttacaaccgtcttcaaacagccaggctgtgccccagaa
cttcactgggcttccttccataactatggatctgtgagcatcactttaatttcagagtgt
ggaagacaccttaataagaatcatgaatcacattttacaaatcaggatacacaggatgta
aggttaagtgacctgtcctatcagggccacaaagccagttaa

>gi568815596f:138450217_138669077|GENSCAN_predicted_peptide_3|154_aa
MDEFLNTYTLPRLNQEEVESLNRPITGSEIEALINSLPTKKSAGPDGFTAEFYQRYKEEL
RIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRISIVKMAILPKSLGL
EMFACGKKWTIKQTAFNLFPEKRSSFARKQASMI

>gi568815596f:138450217_138669077|GENSCAN_predicted_CDS_3|465_bp
atggatgaattcctcaacacatacaccctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgaggcattaattaatagcttaccaaccaaa
aaaagtgcaggaccagatggattcacagctgaattctaccagaggtacaaggaggagctg
agaataaaatacctaggaatccaacttacaagagatgtgaaggacctcttcaaggagaac
tacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgc
tcatgggtaggaagaatcagtatcgtgaaaatggccatactgccaaagagcctgggcttg
gagatgtttgcctgtggaaagaagtggaccataaagcagactgcttttaatctcttccca
gagaaaagaagttcatttgcaaggaaacaggcaagcatgatctga

>gi568815596f:138450217_138669077|GENSCAN_predicted_peptide_4|129_aa
MGKKQSRKTGNSKNQSASPPPKERSSSLATEQSWMENDFDELREEGFRRSNYSKLKEEVQ
THGKEVKNLEKKLDEWLTRITNAEKSLKDLMELKTKTRELRDECTSLSSQCDQLKERVSV
MEDEMNEVK

>gi568815596f:138450217_138669077|GENSCAN_predicted_CDS_4|390_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaatcagagcgcctctcctcct
ccaaaggaacgcagctcctcactagcaacagaacaaagctggatggagaatgactttgac
gagttgagagaagaaggcttcagacgatcaaactactccaagctaaaggaggaagttcaa
acccatggcaaagaagttaaaaaccttgaaaaaaaattagacgaatggctaactagaata
accaatgcagagaagtccttaaaggacctgatggagctgaaaaccaagacacgagaactc
cgtgatgaatgcacaagcctcagtagccaatgcgaccaactgaaagaaagggtatcagtg
atggaagatgaaatgaatgaagtgaagtga

>gi568815596f:138450217_138669077|GENSCAN_predicted_peptide_5|327_aa
MGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLL
NAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS
VNISGHTNTNTLKVPECRLAEDLGNLWENTRFTDCSFFVRGQEFKAHKSVLAARSPVFNA
MFEHEMEESKKNRVEINDLDPEVFKEMMRFIYTGRAPNLDKMADNLLAAADKYALERLKV
MCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINSQATDIMETSGWKSMIQSHPH
LVAEAFRALASAQCPQFGIPRKRLKQS

>gi568815596f:138450217_138669077|GENSCAN_predicted_CDS_5|984_bp
atgggtgaagtgttaaaaagttcaacattttcatctggcccaagtgacaaaatgaaatgg
tgcctgagggtaaacccaaagggattagatgatgaaagtaaagactacttgtccttatat
ttgcttttagtcagctgccccaaaagtgaagttcgagcaaaattcaaattttcccttctg
aatgctaaaagggaagaaacaaaagcaatggaaagccaaagagcatatcgatttgtgcaa
gggaaggactggggttttaaaaaattcattagaagggactttttgcttgatgaagctaat
ggtcttttaccagatgacaagcttacattattttgtgaggtgagtgtggtccaagattca
gtaaacatatcaggacatactaatacaaatactttgaaggtgcctgagtgtcgtctagca
gaagatttaggtaatctctgggaaaacacaagatttacagactgcagttttttcgtgaga
ggacaagaatttaaagctcataaatctgtgcttgcagctcgatctccagtttttaacgcc
atgtttgaacatgaaatggaagaaagcaaaaagaatcgagtggaaataaatgatttagac
cctgaagtttttaaagaaatgatgagattcatttacacagggagagcaccaaaccttgac
aaaatggctgacaacttgttggcagctgcagacaaatatgcactggaacggctgaaggtc
atgtgcgaagaagctttgtgtagtaacctctcagtagagaatgttgcagatacccttgtc
cttgcagatttgcacagtgcagaacagttgaaagcacaagccatagactttattaatagc
caagcaaccgacataatggaaacatcagggtggaagtccatgattcagtctcaccctcat
ttagtagcagaagcctttcgagcactagcatctgcacagtgtccacagtttggcattcca
cgcaaacggctaaaacagtcctga

>gi568815596f:138450217_138669077|GENSCAN_predicted_peptide_6|217_aa
MTVYLENPIISAPNLLKLISKFSKVSGYIINVQKSQAFLYTNNRQIESQIMSELPFTIAS
KRIKYPGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIVKMAILPKVIY
RFNAIPIKPPMTFFTELEKTTFKFIWNQKRACIAKTILSQKNKAGGIMLPDFKLYYKATV
TKTAWYWYQNRDIDQWNRTEPSEIIPHIYNHLIFESP

>gi568815596f:138450217_138669077|GENSCAN_predicted_CDS_6|654_bp
atgactgtatatttagaaaaccccatcatctcagccccaaatctccttaagctgataagc
aagttcagcaaagtctcaggatacataatcaatgtgcagaaatcacaagcattcttatac
accaataacagacaaatagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacccaggaatccaacttacaagggatgtgaaggaccttttcaaggag
aactacaaaccactgctcaacgaaataaaagaggacacaaacaaatggaagaacattcca
tgctcatggataggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttat
agattcaatgccatccccatcaagccaccaatgactttcttcacagaattggaaaaaact
actttcaaattcatatggaaccaaaaaagagcctgcattgccaagacaatcctaagccaa
aagaacaaagctggaggcatcatgctacctgacttcaaactatactacaaggctacagta
accaaaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaacagag
ccctcagaaataataccacacatctacaaccatctgatctttgaatcaccatag

>gi568815596f:138450217_138669077|GENSCAN_predicted_peptide_7|413_aa
MKTSANLLGVCSGAIFALLMKTKAVDPLNPPSVLSLIPLVTNVGKAVVFLKHPSCFLTFF
STCTAAAAALSEFTQEQHDGAQPSPKCLAEELGDAWTIQIEASWKYRAVNTNQRGKLLAR
VTQIHANEDSGESRHQRWLDGIVRFPICQTPVLALHLMITFGTKQTDDRCCFAVQGGIIS
NAGLLPEENLPLTGNYNSTRDVAGDTQPNHINGCGISEVVVWVCDQWESMKECSNVDQMA
ASGKYDHYYHLVNCDYEASHSTISALPALESSGLIINMQIPGAPRKFNPSHGEAVMESGN
NRPRFSHPSAANPRDSFTCFSYLDFGKHYVQHLVSVMFQDELSVGLHSKFTEKASDWPSM
GHLSQSAEGKRTQRSMGILLGESTPKNAHTLSSHTPLAVAQQQGHTILHEMQG

>gi568815596f:138450217_138669077|GENSCAN_predicted_CDS_7|1242_bp
atgaaaacaagtgcaaatctgttaggagtatgttctggggcaatttttgctctcctgatg
aagacaaaggctgttgatccactgaacccacccagtgttctttccttgatacccttagtg
actaatgtgggaaaggcagtggtgttcctcaaacatcccagttgcttcctcacgtttttc
agcacctgcacagcggctgctgcagctctgtctgaattcacacaggagcaacatgatggt
gctcagccctcgccgaagtgtcttgctgaagagttgggagatgcttggactattcagata
gaagccagctggaagtacagggcagtcaacacaaaccagagaggcaaacttttggccaga
gtaacccagattcatgctaatgaggacagtggggaaagccgtcatcaaaggtggctcgat
gggattgttcgctttccaatctgtcagaccccagttctggctctgcatttgatgattaca
tttggtaccaaacagactgacgaccgctgctgtttcgctgtacaaggtggcatcatcagc
aatgcaggactgctcccggaggaaaatctgcctctgacggggaattataactcaacacga
gatgtggctggggacacacagccaaaccatatcaatgggtgtggcatcagtgaggtagtg
gtgtgggtttgtgatcagtgggaaagcatgaaagaatgctcaaatgtggaccaaatggct
gcctctggcaaatatgatcattattatcatctagtgaattgtgactatgaagcttctcac
agcacaatctcggcactaccagcattagaatcatcagggttaataattaatatgcagatt
cctggggccccacggaaattcaatccttctcatggtgaagcagtcatggaatctgggaat
aacagaccccgcttctcccatccctcagctgccaacccgagggacagtttcacttgcttc
tcttacttagattttggaaaacattatgtccaacatctcgtaagtgtaatgttccaagat
gaactgtctgttggtcttcattctaaattcacagagaaggcttctgactggcccagtatg
gggcatctatcccagtcagccgaagggaaaagaacacagagaagtatgggaatactcttg
ggtgagtctactcctaaaaatgcacacaccctttcctctcacactccactagctgtggct
cagcaacaaggccacaccatactacatgagatgcagggctag