GENSCAN 1.0	Date run:  6-Nov-116	Time: 12:08:51

Sequence gi568815596r:32124476_32352679 : 228204 bp : 41.52% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2483   2547   65  0  2   75   95    40 0.283   0.92
 1.02 Intr +  12088  12163   76  0  1   69   82    64 0.856   2.07
 1.03 Intr +  12402  12493   92  1  2   92   78    46 0.935   2.79
 1.04 Intr +  12634  12713   80  0  2   53   91    88 0.929   3.03
 1.05 Intr +  20462  20532   71  2  2  110   92    83 0.915   8.81
 1.06 Intr +  22743  22783   41  1  2   92   65    51 0.754   0.22
 1.07 Term +  41203  41688  486  0  0   58   38   276 0.686  13.31
 1.08 PlyA +  41717  41722    6                               1.05

 2.00 Prom +  43977  44016   40                              -3.65
 2.01 Init +  44992  45027   36  0  0  125   41    10 0.830   0.06
 2.02 Intr +  46812  46898   87  2  0   58  110    94 0.938   7.85
 2.03 Intr +  69337  69508  172  0  1   41   95    64 0.077   0.99
 2.04 Intr +  72843  72917   75  1  0   61  116    55 0.823   4.17
 2.05 Term +  77080  77240  161  2  2   90   39   180 0.930  10.42
 2.06 PlyA +  77420  77425    6                              -0.45

 3.00 Prom +  77739  77778   40                              -8.35
 3.01 Init +  78385  78762  378  0  0   79   80   320 0.885  27.25
 3.02 Intr +  79079  79413  335  1  2   58   77   230 0.976  12.34
 3.03 Intr +  80115  80217  103  0  1   74  110    57 0.979   5.76
 3.04 Intr +  82411  82458   48  0  0   99   94    35 0.898   3.16
 3.05 Intr +  85018  85086   69  0  0  118   76    35 0.930   3.76
 3.06 Term +  95738  96238  501  1  0   79   44   275 0.991  15.69
 3.07 PlyA +  99325  99330    6                              -0.45

 4.09 PlyA -  99654  99649    6                               1.05
 4.08 Term - 100290  99998  293  1  2   85   36   164 0.438   5.42
 4.07 Intr - 111137 110926  212  1  2  109   82    79 0.579   7.03
 4.06 Intr - 116650 116527  124  2  1   77  101    63 0.655   5.22
 4.05 Intr - 127126 125132 1995  2  0  102   39  1630 0.760 145.87
 4.04 Intr - 128204 127944  261  0  0   81  106   164 0.311  14.04
 4.03 Intr - 133874 133691  184  2  1   15  -13   327 0.019  13.74
 4.02 Intr - 140388 140263  126  0  0  101   84    47 0.125   5.56
 4.01 Init - 140907 140905    3  0  0  113   22     0 0.108  -4.05
 4.00 Prom - 141629 141590   40                              -7.55

 5.00 Prom + 141635 141674   40                              -8.85
 5.01 Init + 142357 142522  166  0  1   51  -17   211 0.012   6.74
 5.02 Intr + 151644 151764  121  1  1   57   67    66 0.404   0.03
 5.03 Intr + 153261 153759  499  0  1  -11  100   259 0.416   9.26
 5.04 Intr + 160517 160655  139  1  1   -2  115   105 0.282   3.32
 5.05 Intr + 166008 166161  154  1  1   74   36   156 0.738   7.21
 5.06 Intr + 167702 167873  172  2  1   28  110    58 0.611   1.02
 5.07 Intr + 168841 168931   91  0  1   45   74    41 0.441  -2.95
 5.08 Term + 169027 169121   95  2  2   84   49   117 0.916   4.41
 5.09 PlyA + 170862 170867    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:32124476_32352679|GENSCAN_predicted_peptide_1|303_aa
XLRAPARGLLLFGPPGNGKTMLVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREG
EHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRMTDGYSGSDLTALAK
DAALGPIRELKPEQVKNMSASEVPTNLSESSEGAALAAFRHGVQGQPGRGRKPEARARTS
SHAFLTANRPLVPHPFRSGKTRAPRTASGGSCAAPYHGELAVGVRVSAVADSVYLIWSRS
DLEIPQPPRGGVIGVEVGPLGRSGCLPKCSPSEFWSLSVPHLFRRRSRSRPRCRQSFQLL
ASF

>gi568815596r:32124476_32352679|GENSCAN_predicted_CDS_1|912_bp
nggcttagagctcctgccagagggctgttactctttggtccacctgggaatgggaagaca
atgctggtgggagaaggagagaaattggtgagggctctttttgctgtggctcgagaactt
caaccttctataatttttatagatgaagttgatagccttttgtgtgaaagaagagaaggg
gagcacgatgctagtagacgcctaaaaactgaatttctaatagaatttgatggtgtacag
tctgctggagatgacagagtacttgtaatgggtgcaactaataggccacaagagcttgat
gaggctgttctcagaatgactgatggatactcaggaagtgacctaacagctttggcaaaa
gatgcagcactgggtcctatccgagaactaaaaccagaacaggtgaagaatatgtctgcc
agtgaggtcccgaccaatctctcggagagctcagagggagccgctctagccgccttccgc
cacggagtgcagggacagccgggaaggggacggaagccggaggccagagcacgcacttcc
tcccacgctttcctcacagccaatcgcccactggtgccccaccccttccgttctgggaaa
actcgagcacccagaacggcttccggcgggagctgtgcagctccttatcatggtgagttg
gctgttggggtgagggtttcggctgtagctgattcggtttatcttatttggtcccgaagc
gaccttgaaatccctcagccacccagaggaggggtcattggagttgaagtcgggcccctt
ggcaggagcggctgtctcccaaaatgttccccttcagagttctggtccctttcggtccct
cacctgttccgcaggcgctcacgatctaggccccgctgcaggcagagctttcagctcctg
gcgagtttctga

>gi568815596r:32124476_32352679|GENSCAN_predicted_peptide_2|176_aa
MASQEKDIFIGWGTIHLFRKPQRSFFGKLLREFRLVAADRRSLYVLKLHTDNTKNKLKVN
VIVVLFRGRLLVGTFVALCFNLFTMLSIRNKPFAYVSEDNLSIFFLKLLVRAGFKSMLQI
LVEGGCGHCARREAAVASNAWETPLGVHYGTGSTLGGVREPEEGEAEELYGYHSFG

>gi568815596r:32124476_32352679|GENSCAN_predicted_CDS_2|531_bp
atggccagccaagaaaaagatatatttattggctgggggacaattcatctctttcgaaaa
ccacaaagatccttttttggcaagttgttacgggaatttagacttgtagcagctgaccga
aggtccctctacgtattgaaattacatactgataataccaagaacaaattaaaggtgaat
gttatcgttgttctttttaggggaagattattagttggtacttttgtggctctttgtttc
aacctgttcacgatgctttctattcggaataaaccttttgcttatgtctcagaagataat
ttaagtattttcttcttaaagctgctagtacgagctggcttcaagagcatgttgcagatc
ttagtcgaaggtggttgtggccactgtgcccggagggaggcagcagtggccagtaatgcc
tgggaaactcctctgggggtacattatggaactggaagcacccttggaggagtccgagag
ccagaagaaggagaggcagaagagctttatggatatcacagtttcggctaa

>gi568815596r:32124476_32352679|GENSCAN_predicted_peptide_3|477_aa
MTQKAAASVEHLAIRCHWSQRPAVTGDVLQVYSGSEGTAIIFCETQRSVTEIAMNPHIKQ
NAQCLHGDIAQSQREFTLKDFREGSFKVLVATNVAACGLDIPEVDLVIHGSPPQDVESIS
IVLDAQGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNVRVCFDVPTT
KSERLQAEWHDSDWIFSVPAKLPEIEEYYDRNTSSNSRQRSGWSSGQSGRSGGRSGSRNY
FAVDTASAIAIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRN
EHFWTLGFGSLAGSVHVRIRRDANEQMVLAHVTNRLYTLVSTLTVQIFKDDWIRPALLSG
PVAANVLNFSDHHVIPMPLLKGTDDLNPVTSTPAKPSSPPPEFSFNTPGKNVNPVILLNT
QTRPYGFGLNHGHTPYSSMLNQGLGVPGIGATQGLRTGFTNIPSRYGTNNRIGQPRP

>gi568815596r:32124476_32352679|GENSCAN_predicted_CDS_3|1434_bp
atgactcaaaaggctgcagcttctgtggaacatttggccatccggtgtcattggtctcag
aggccagcagttactggagatgtccttcaagtctacagtgggtctgaagggacggctatt
attttctgtgagacccagaggagtgtaactgaaatagccatgaatccacacataaaacag
aatgcccagtgtttacatggggacattgcacagtcacaaagagaatttacactaaaagac
ttcagagaaggtagttttaaagttttggtggcaaccaacgtggctgcctgtggtttggac
attcctgaagttgacctggtgattcatggttctcctcctcaggatgttgagtctatatcc
atcgttctggacgcacagggatttgtgaccatgactctggaaagcctagaggaaatacag
gatgtcagctgtgcttggaaagaacttaacagaaagctgagtagtaatgcagtgtctcag
attaccagaatgtgcctcctgaaaggaaatgtgcgtgtttgctttgatgttcctacaact
aagtcagaaaggttacaggcagagtggcatgattccgactggatattctcagtgccagcc
aaattacctgaaattgaagaatattatgatagaaacacatcttctaattccagacagagg
agtggttggtcaagtggccagtcgggccgatcaggtggtcgatctggcagccgtaattat
tttgccgtagacactgcctctgctatagctattgccttgatgacatttggcactatgtat
cccatgagtgtgtacagtgggaaagtcttactccagacaacaccaccccatgttattggt
cagttggacaaactcatcagagaggtatctaccttagatggagttttagaagtccgaaat
gaacatttttggaccctaggttttggctcattggctggatcagtgcatgtaagaattcga
cgagatgccaatgaacaaatggttcttgctcatgtgaccaacaggctgtacactctagtg
tctactctaactgttcaaattttcaaggatgactggattaggcctgccttattgtctggg
cctgttgcagccaatgtcctaaacttttcagatcatcacgtaatcccaatgcctctttta
aagggtactgatgatttgaacccagttacatcaactccagctaaacctagtagtccacct
ccagaattttcatttaacactcctgggaaaaatgtgaacccagttattcttctaaacaca
caaacaaggccttatggttttggtctcaatcatggacacacaccttacagcagcatgctt
aatcaaggacttggagttccaggaattggagcaactcaaggattgaggactggttttaca
aatataccaagtagatatggaactaataatagaattggacaaccaagaccatga

>gi568815596r:32124476_32352679|GENSCAN_predicted_peptide_4|1065_aa
MNKKVSGLQELEASLKRKANTKKLYFKNMSWSPKKRAIGLLSQRPLQADTQAAGRREEHI
GGRTYKQLDVQRTLKGECWRKSTQQTSARQQAIHQRNDSEFGLEVNFIKDNSRALIQRMG
MTVIKQITDDLFVWNVLNREEVNIICCEKVEQDAARGIIHMILKKGSESCNLFLKSLKEW
NYPLFQDLNGQSLFHQTSEGDLDDLAQDLKDLYHTPSFLNFYPLGEDIDIIFNLKSTFTE
PVLWRKDQHHHRVEQLTLNGLLQALQSPCIIEGESGKGKSTLLQRIAMLWGSGKCKALTK
FKFVFFLRLSRAQGGLFETLCDQLLDIPGTIRKQTFMAMLLKLRQRVLFLLDGYNEFKPQ
NCPEIEALIKENHRFKNMVIVTTTTECLRHIRQFGALTAEVGDMTEDSAQALIREVLIKE
LAEGLLLQIQKSRCLRNLMKTPLFVVITCAIQMGESEFHSHTQTTLFHTFYDLLIQKNKH
KHKGVAASDFIRSLDHCGDLALEGVFSHKFDFELQDVSSVNEDVLLTTGLLCKYTAQRFK
PKYKFFHKSFQEYTAGRRLSSLLTSHEPEEVTKGNGYLQKMVSISDITSTYSSLLRYTCG
SSVEATRAVMKHLAAVYQHGCLLGLSIAKRPLWRQESLQSVKNTTEQEILKAININSFVE
CGIHLYQESTSKSALSQEFEAFFQGKSLYINSGNIPDYLFDFFEHLPNCASALDFIKLDF
YGGAMASWEKAAEDTGGIHMEEAPETYIPSRAVSLFFNWKQEFRTLEVTLRDFSKLNKQD
IRYLGKIFSSATSLRLQIKRCAGVAGSLSLVLSTCKNIYSLMVEASPLTIEDERHITSVT
NLKTLSIHDLQNQRLPGGLTDSLGNLKNLTKLIMDNIKMNEEDAIKLGQISVLIFVSIFE
TIQSLNCSLFLPVDRMNVLEQLTALMLPWGCDVQGSLSSLLKHLEEVPQLVKLGLKNWRL
TDTEIRILGAFFGKNPLKNFQQLNLAGNRVSSDGWLAFMGVFENLKQLVFFDFSTKEFLP
DPALVRKLSQVLSKLTFLQEARLVGWQFDDDDLSVITGAFKLVTA

>gi568815596r:32124476_32352679|GENSCAN_predicted_CDS_4|3198_bp
atgaacaagaaggtatctggtctacaagaactcgaggcctcactgaaacggaaagcaaat
acaaagaaactttattttaaaaacatgtcttggtctcccaagaagagggcaattggattg
ctcagccagagacccttgcaggcagacacacaagcggctggacgtcgagaggaacacatc
ggcggaagaacatacaagcagctggacgtccagaggacgttgaagggagaatgctggcgg
aagagcacacaacagacatcggcacgccagcaggccatccaccagaggaacgactcggag
tttggcctggaggtgaatttcataaaggacaatagccgagcccttattcaaagaatggga
atgactgttataaagcaaatcacagatgacctatttgtatggaatgttctgaatcgcgaa
gaagtaaacatcatttgctgcgagaaggtggagcaggatgctgctagagggatcattcac
atgattttgaaaaagggttcagagtcctgtaacctctttcttaaatcccttaaggagtgg
aactatcctctatttcaggacttgaatggacaaagtctttttcatcagacatcagaagga
gacttggacgatttggctcaggatttaaaggacttgtaccataccccatcttttctgaac
ttttatccccttggtgaagatattgacattatttttaacttgaaaagcaccttcacagaa
cctgtcctgtggaggaaggaccaacaccatcaccgcgtggagcagctgaccctgaatggc
ctcctgcaggctcttcagagcccctgcatcattgaaggggaatctggcaaaggcaagtcc
actctgctgcagcgaattgccatgctctggggctccggaaagtgcaaggctctgaccaag
ttcaaattcgtcttcttcctccgtctcagcagggcccagggtggactttttgaaaccctc
tgtgatcaactcctggatatacctggcacaatcaggaagcagacattcatggccatgctg
ctgaagctgcggcagagggttcttttccttcttgatggctacaatgaattcaagccccag
aactgcccagaaatcgaagccctgataaaggaaaaccaccgcttcaagaacatggtcatc
gtcaccactaccactgagtgcctgaggcacatacggcagtttggtgccctgactgctgag
gtgggggatatgacagaagacagcgcccaggctctcatccgagaagtgctgatcaaggag
cttgctgaaggcttgttgctccaaattcagaaatccaggtgcttgaggaatctcatgaag
acccctctctttgtggtcatcacttgtgcaatccagatgggtgaaagtgagttccactct
cacacacaaacaacgctgttccataccttctatgatctgttgatacagaaaaacaaacac
aaacataaaggtgtggctgcaagtgacttcattcggagcctggaccactgtggagaccta
gctctggagggtgtgttctcccacaagtttgatttcgaactgcaggatgtgtccagcgtg
aatgaggatgtcctgctgacaactgggctcctctgtaaatatacagctcaaaggttcaag
ccaaagtataaattctttcacaagtcattccaggagtacacagcaggacgaagactcagc
agtttattgacgtctcatgagccagaggaggtgaccaaggggaatggttacttgcagaaa
atggtttccatttcggacattacatccacttatagcagcctgctccggtacacctgtggg
tcatctgtggaagccaccagggctgttatgaagcacctcgcagcagtgtatcaacacggc
tgccttctcggactttccatcgccaagaggcctctctggagacaggaatctttgcaaagt
gtgaaaaacaccactgagcaagaaattctgaaagccataaacatcaattcctttgtagag
tgtggcatccatttatatcaagagagtacatccaaatcagccctgagccaagaatttgaa
gctttctttcaaggtaaaagcttatatatcaactcagggaacatccccgattacttattt
gacttctttgaacatttgcccaattgtgcaagtgccctggacttcattaaactggacttt
tatgggggagctatggcttcatgggaaaaggctgcagaagacacaggtggaatccacatg
gaagaggccccagaaacctacattcccagcagggctgtatctttgttcttcaactggaag
caggaattcaggactctggaggtcacactccgggatttcagcaagttgaataagcaagat
atcagatatctggggaaaatattcagctctgccacaagcctcaggctgcaaataaagaga
tgtgctggtgtggctggaagcctcagtttggtcctcagcacctgtaagaacatttattct
ctcatggtggaagccagtcccctcaccatagaagatgagaggcacatcacatctgtaaca
aacctgaaaaccttgagtattcatgacctacagaatcaacggctgccgggtggtctgact
gacagcttgggtaacttgaagaaccttacaaagctcataatggataacataaagatgaat
gaagaagatgctataaaactaggtcagatttctgttctcatatttgtatcaatttttgag
accatccagtccctgaactgctctttgtttcttccagtcgacaggatgaacgtgctagaa
cagctcaccgcactgatgctgccctggggctgtgacgtgcaaggcagcctgagcagcctg
ttgaaacatttggaggaggtcccacaactcgtcaagcttgggttgaaaaactggagactc
acagatacagagattagaattttaggtgcattttttggaaagaaccctctgaaaaacttc
cagcagttgaatttggcgggaaatcgtgtgagcagtgatggatggcttgccttcatgggt
gtatttgagaatcttaagcaattagtgttttttgactttagtactaaagaatttctacct
gatccagcattagtcagaaaacttagccaagtgttatccaagttaacttttctgcaagaa
gctaggcttgttgggtggcaatttgatgatgatgatctcagtgttattacaggtgctttt
aaactagtaactgcttaa

>gi568815596r:32124476_32352679|GENSCAN_predicted_peptide_5|478_aa
MVPYYREPEGDLKLTGEVSKTMNAEIRVIRLRAKRCQQPPAAGRGINGFSPKAPRTQTLY
GCRVGGRSGLSLPTRPYFRLSHGEKPWTTPGFPRQRNKSTQGGKRGLRFPRITSELPVLG
KLPESTTGRPNQNLPPGANGRAHYKEPIPAPLSLLWSCQGAGVVVLGWSPPRRLWWGSLG
AAQRPAVPVSGLARSLHVETRRPHRRASVRVAAAAASGSGPSRSLFYRGRLGVAARCSLR
ARPRPMPPLTGTSPLSPQQTRKKESPGYSEEYGLEGDKNDWGEGSLYTIIIMQTGVDGLH
ELATGGRNDLSGSIASPDVKLNLGGDFIKESTATTFLRQRGYGWLLEVEDDDPEDNKPLL
EELDIDLKDIYYKIRCVLMPMPSLGFNRQVVRDNPDFWGPLAVVLFFSMISLYGQFRHLF
NKAHLAPPLTHLTLSGHSTCFREHRFGDTATIRFLNLFPTFPPFLFHKTAIVIVARSQ

>gi568815596r:32124476_32352679|GENSCAN_predicted_CDS_5|1437_bp
atggtcccttattacagagagccagagggagatttgaaactgacaggagaagtcagtaag
accatgaatgcagagattcgagtaatacggctacgagccaaaagatgccagcagccacct
gcagctggaagaggcataaatggattctcccctaaagctcccaggacacagaccctttac
gggtgtcgggttggaggacggtcaggtctttcccttcctacgaggccatatttcagacta
tcacatggggagaaaccttggacaacacctggctttcctaggcagaggaacaaaagcacc
caaggaggaaaaagaggcctgagatttccacgaattacaagtgaacttcctgtcctgggt
aaacttccggaatcaacaacaggaagacccaatcagaatcttcctccgggagccaatggg
agagcacattacaaagagccaatcccagcgccgctgtcactgttatggtcctgtcagggt
gccggcgtcgtggtgcttgggtggtcgccaccaagaagactttggtggggtagtctcggg
gcagctcagcggcccgctgtgcccgtttctggcctcgctcgcagcttgcacgtcgagact
cgtaggccgcaccgtagggcgagcgtgcgggtcgccgccgcggccgcctcggggtctggg
cccagccgcagcctcttctaccgcggccggttgggagtcgccgcgagatgcagcctccgg
gcccgcccccggcctatgcccccactaacggggacttcacctttgtctcctcagcagacg
cggaagaaagagtctccggggtacagtgaagagtatggattggaaggagacaagaatgac
tggggggagggcagtttgtacaccattataatcatgcagacaggagttgatggtttgcat
gagcttgctactggtggtagaaatgatctcagtggttcaatagcatccccagatgtcaaa
ttaaatcttggtggagattttatcaaagaatctacagctactacatttctgagacaaaga
ggttatggctggcttctggaagttgaagatgatgatcctgaagataacaagccactcttg
gaagaattggacattgatctaaaggatatttactacaaaatccgatgtgttttgatgcca
atgccatcacttggttttaatagacaagtggtgagagacaatcctgacttttggggtcct
ctggctgttgttcttttcttttccatgatatcattatatggacagtttaggcatctgttt
aacaaagcacatcttgcaccgcccttaacccatttaaccctgagtggacacagcacatgt
ttcagagagcacaggtttggggacacggcaaccatccgatttctcaatcttttccccacc
tttcccccctttctgttccacaaaaccgccattgtcatcgtggcccgttctcaatga