GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:08:43

Sequence gi568815584f:50213021_50422719 : 209699 bp : 41.67% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  17943  18239  297  2  0   74   71   132 0.738   7.37
 1.02 Intr +  18475  18652  178  0  1   78   89    60 0.709   3.67
 1.03 Term +  19453  19610  158  2  2    7   43   150 0.558  -0.49
 1.04 PlyA +  19963  19968    6                               1.05

 2.11 PlyA -  22266  22261    6                               1.05
 2.10 Term -  34233  34038  196  2  1  122   36   236 0.918  17.70
 2.09 Intr -  52469  52338  132  1  0  105   82    60 0.730   5.94
 2.08 Intr -  54890  54733  158  2  2   72   60    98 0.764   3.29
 2.07 Intr -  56310  56143  168  0  0   77   94   116 0.890  10.32
 2.06 Intr -  65534  65500   35  0  2  122   98     9 0.866   2.32
 2.05 Intr -  71013  70851  163  0  1   78  103   180 0.953  17.13
 2.04 Intr -  81226  81095  132  1  0   58  110    79 0.990   7.02
 2.03 Intr -  89148  88997  152  1  2  100   86   110 0.997  10.96
 2.02 Intr -  89997  89882  116  2  2   19   77   137 0.927   4.87
 2.01 Init -  99130  98991  140  1  2   51  109    58 0.750   2.63
 2.00 Prom -  99836  99797   40                              -3.45

 3.00 Prom + 104168 104207   40                              -2.85
 3.01 Init + 106214 106281   68  1  2   66   30    83 0.483   0.90
 3.02 Intr + 109491 109699  209  0  2   84   28   218 0.602  13.20
 3.03 Intr + 110925 111096  172  1  1   89   71   102 0.490   6.68
 3.04 Intr + 112589 112625   37  2  1  100   46    -8 0.010  -6.45
 3.05 Intr + 119002 119216  215  0  2   70   91   174 0.078  12.49
 3.06 Term + 122439 122538  100  0  1   84   41   135 0.560   5.02
 3.07 PlyA + 122902 122907    6                              -0.45

 4.21 PlyA - 122931 122926    6                              -3.74
 4.20 Term - 123200 122973  228  2  0   39   48   177 0.781   4.45
 4.19 Intr - 126009 125927   83  1  2   87  101    84 0.935   8.04
 4.18 Intr - 128212 128012  201  2  0   36  106   360 0.704  30.94
 4.17 Intr - 129202 129112   91  1  1   56   61    52 0.166  -2.05
 4.16 Intr - 130038 129886  153  0  0   28   72    94 0.056   1.15
 4.15 Intr - 145124 145004  121  1  1   38   76    64 0.164  -0.22
 4.14 Intr - 146129 146008  122  2  2   91   96    75 0.505   6.97
 4.13 Intr - 149374 149166  209  2  2   37   52   124 0.593   1.57
 4.12 Intr - 150017 149870  148  2  1   58   73   163 0.965  10.69
 4.11 Intr - 163399 163317   83  2  2  111   57     2 0.060  -2.16
 4.10 Intr - 164709 164521  189  1  0   71   81   155 0.895  11.74
 4.09 Intr - 165412 165157  256  1  1   88  103   102 0.633   7.79
 4.08 Intr - 167212 167085  128  2  2   47   63    64 0.319  -0.72
 4.07 Intr - 177164 177109   56  1  2   81   91    32 0.683   0.50
 4.06 Intr - 177432 177257  176  0  2   -5   36   192 0.116   2.52
 4.05 Intr - 182904 182681  224  1  2    6   86   276 0.772  16.12
 4.04 Intr - 184261 184038  224  0  2   64   37   231 0.648  12.45
 4.03 Intr - 184616 184566   51  1  0   91   37   139 0.567   6.20
 4.02 Intr - 197628 197426  203  0  2   29   49   239 0.003  11.26
 4.01 Init - 203441 203406   36  2  0   63   98    44 0.029   2.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 150221 150201   21  2  0   60  101    13 0.832  -0.81
S.002 Term + 154378 154555  178  1  1   81   47   163 0.867   7.68


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:50213021_50422719|GENSCAN_predicted_peptide_1|210_aa
MKSSFMIITKPSFRDQAKKKNLRNVLQNATGNCEPPIASQRETARPRGLEPCGRDDLLPV
RSSGGHGPPAGRPAPSTDLPQGRDQQSPPFRTVLLAEELRPQRKRGDPQARATPGGDLLS
RRRWPASGAAPPPLSGFAARQGYSWPSPAPTPATAAAGGPSLARAPVRSQNHIVFTKLSR
YFRIVFLIVSSKLCRLQVLQNLDRRLGNTH

>gi568815584f:50213021_50422719|GENSCAN_predicted_CDS_1|633_bp
atgaaatccagttttatgatcataacaaaaccttccttccgggaccaggcaaaaaaaaaa
aacttgagaaacgtccttcagaatgcaacaggcaattgtgagccccccattgccagccaa
cgagaaacggctcggccccggggactcgagccctgtgggagggacgacctgctccccgtt
agaagctcggggggccacgggccacccgccggccgccccgcccctagcactgaccttccg
cagggccgagaccaacagtccccgccatttcggactgttctcctcgctgaagaactccgc
ccgcagaggaagcgcggcgacccgcaagcccgggcgaccccgggcggcgacctcctttcc
cggcggcgctggcccgcttctggggcggctcctcctcctttgtctgggttcgcggcccgt
caggggtacagctggcccagccccgccccgactcccgctacggccgcggcgggcggtcct
tcacttgcacgggcccctgtgcgttcacaaaatcatatcgtttttacaaaactttcaaga
tattttcgaattgttttcttaatcgtgtcatccaaattgtgtaggcttcaggtcctacaa
aacctggatcggcgtctaggaaacactcattag

>gi568815584f:50213021_50422719|GENSCAN_predicted_peptide_2|463_aa
MVPALRYLVGACGRARGLFAGGSPGACGFASGRPRPLCGGSRSASTSSFDIVIVGGGIVG
LASARALILRHPSLSIGVLEKEKDLAVHQTGHNSGVIHSGIYYKPESLKAKLCVQGAALL
YEYCQQKGISYKQCGKLIVAVEQEEIPRLQALYEKGLQNGVPGLRLIQQEDIKKKEPYCR
GLMAIDCPHTGIVDYRQVALSFAQDFQEAGGSVLTNFEVKGIEMAKESPSRSIDGMQYPI
VIKNTKGEEIRCQYVVTCAGLYSDRISELSGCTPDPRIVPFRGDYLLLKPEKCYLVKGNI
YPVPDSRFPFLGVHFTPRMDGSIWLGPNAVLAFKREGYRPFDFSATDVMDIIINSGLIKL
ASQNFSYGVTEMYKACFLGATVKYLQKFIPEITISDILRGPAGVRAQALDRDGNLVEDFV
FDAGVGDIGNRILHVRNAPSPAATSSIAISGMIADEVQQRFEL

>gi568815584f:50213021_50422719|GENSCAN_predicted_CDS_2|1392_bp
atggtgccagcgctgcgttatttggttggtgcctgcggacgggcccgcgggcttttcgcc
ggtggctcccctggggcgtgcgggttcgcgtctgggaggccaagaccgctgtgtggaggt
agccgcagcgccagcaccagctcatttgatatagtcatcgttggtggcggaattgtgggg
cttgcctctgccagagcactcatcctgcgacatccatcactttctattggtgttctggaa
aaggagaaagatttagctgttcaccagactggacataacagtggtgtcatacatagtgga
atttattataaacctgagtctctgaaagccaaattatgtgtacaaggtgcagccctcctc
tatgagtactgtcagcaaaagggaatttcctacaagcagtgtggcaagcttatagtagct
gttgaacaagaagaaattcccagacttcaggccctatatgagaaaggcctccagaatggt
gtcccgggcctgaggctgatccagcaggaggatataaaaaagaaggagccatattgtagg
ggtctaatggctattgattgtccacatactggcattgtggactatcggcaggtggctttg
tcatttgcccaggatttccaagaagcaggtggctctgtcttgaccaattttgaagtaaaa
ggtattgaaatggctaaagaaagtccttcaagaagtatagatggaatgcaatatccaatt
gttataaagaatacaaagggagaggaaattcgatgtcagtatgttgtgacatgtgcagga
ctttactcagaccgtatttcagagttgagtggctgcactcctgatcctcgaattgtacca
ttccggggagattacctgcttttgaagccagaaaaatgttatcttgtaaaaggaaatatt
tatccggtcccagatagccggtttcctttcctaggagttcacttcacaccaaggatggat
ggcagtatttggctagggcctaatgcagttcttgcctttaaacgagagggttacagaccc
tttgacttcagtgccacagatgttatggatataattatcaatagtggcttgattaaactg
gcatcccagaatttttcctatggagttactgaaatgtataaagcatgttttcttggtgca
acagtgaagtatcttcaaaaattcatccctgaaattactatcagtgatatacttaggggc
ccagctggagtaagagcccaggccctggatagagatggaaatctggtagaagattttgta
tttgatgcaggagttggggatattggaaatcgcattcttcatgtgagaaatgcaccttct
cctgctgctacttcttccattgcaatttctggaatgattgcagatgaagtacaacaaaga
tttgaattataa

>gi568815584f:50213021_50422719|GENSCAN_predicted_peptide_3|266_aa
MIRGSGAEACSNEDGCSEKGMKGVDYDRIRDVGPDRAASEWLLRCGAMVRYHGQERWQKD
YNHLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLEHVEKIRLCKCHYIEDDCLLRLSQL
ENLQKTILEMEIISCGNITDKGIIALRHLRNLKYLLLSDLPGAGNPGPCVASGSSRTRAP
LGFRERGLQETDVPGALVDRSYDLSPSAGMRMLELKATTAILKSRFQLSVPGGSLLFKQS
PVGHSSISFWPYKAILRQSRAGDNQE

>gi568815584f:50213021_50422719|GENSCAN_predicted_CDS_3|801_bp
atgataagaggtagtggagcagaggcttgcagtaatgaagacggctgtagtgaaaaaggg
atgaaaggggtggattatgatcgcatcagggatgttggccctgacagggcggcatccgag
tggttgctgcgctgtggggccatggtgcgctaccatggccaggagaggtggcagaaggac
tacaaccaccttccaacaggccctctggacaaatacaagattcaggcgatcgacgccacc
gactcttgtatcatgagcattggatttgatcacatggagggcctagagcatgttgaaaaa
ataaggctgtgcaagtgtcattatatcgaggatgactgtttgctgagacttagtcaactt
gaaaatttacaaaaaaccatattggaaatggaaataatatcctgtgggaatatcacagac
aaaggcatcattgctttgcgtcatttaagaaacctcaaatatttgttgttaagtgatctt
cctggagctggaaaccctggcccctgtgtggcatcaggaagcagcaggacaagggcacct
ttaggattcagggagagggggcttcaggagacagatgtccctggggccctggttgataga
tcctatgacctgtctcctagtgctggaatgaggatgctggagctgaaagccacaactgcc
atcctcaagtctagattccaactctctgtaccaggtggcagcctgctgtttaaacagtct
cctgtggggcattcgtcaatctccttttggccgtataaggcgattttgcgccagtcacgt
gctggagacaatcaggaataa

>gi568815584f:50213021_50422719|GENSCAN_predicted_peptide_4|993_aa
MELSTDTGWNQKSNFPPCDSRVSKEEAQLPFPTPSSYGADSSNQTYAHKSQSEREQHKEV
RAVLNHCSGLDGGEESGLCGTSTRIDAGTGNGTDDKVTDQHRHRRCLQGTKGNNRGSEVW
GLLLQGNVDRSGGAPSAGVLLRRRGYSCALHGLRKFANLAGLLSRQQDSARGVSHHSRLK
IHFKKIYSSMMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALR
EIRMLKAPSPYAAEPSLCGMKMVRRGKKEFLPAVAEKVDAPSGVGGQGQDSVTVGSLGRR
STYGRKQEKQVRQREGIIYCYVAVLLRIYYFDQGCVAREEEQFQELVFGPFCHIGSYFTG
HRTNVRPYILLLSRPSPFKTAAGTYEAGLVILECSYFLAEQEPYCPTQALQQPHPIIGPW
ALEGGGVESKEDRHPPPKEAPASCEGFLRSAVPKQAYTPFKTSPDKRLSDCVATPPWAPP
TPLIISSGVLVAICSMIDPVPEFHSEGLLAKATSGSAGILVWIFLCNDAFIYGKYILRSG
VLWVRGLPGFKSEAAALCHKCYSSADPKREQQQDLLQRVKEQSFHSVNGAQARHKGSPSP
HQTQEPSWPHPVDPTPGHRWSCLPVPCRAPALLSPWVVDGTGCCGAGGGSDRGGSAAQEP
TQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGICNIFVCTGRRLGEHTEA
LSKKKKKGGGGPFLKLRAASCRITLFKNVGCGLETTGDLSLNSGGGAASRGVAAALRALV
CGTELTSSDSPQRCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYR
SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV
FSTNQYFSGVKIPDPEDMSLCLSVTLTEGGLLASGAVKRSQMGSSVSQATSWPHPDIVAE
TAELDDIAMARQTPVMLRFNRQKEQEKYLSYGA

>gi568815584f:50213021_50422719|GENSCAN_predicted_CDS_4|2982_bp
atggagctgtccactgatactggctggaatcagaagagtaatttcccgccttgtgactct
cgtgtctccaaagaagaagcccaactccctttcccaacacctagcagctacggtgcagac
tcctccaaccagacttacgcacacaagtctcagtctgaaagagagcagcacaaggaagta
cgtgctgtcctgaaccattgttctggcttggatggtggagaggagtctggcctttgtggg
acaagtacccgcattgatgctggcactgggaacgggacggatgataaagtcactgatcag
cacagacacagaagatgcctccaagggaccaaagggaataaccgcggttctgaggtgtgg
ggactgctgttgcagggaaatgtggaccgctcaggaggggctcctagcgcaggcgtcttg
ctccgcagacgcggttacagctgcgctttgcacggcctgcggaagtttgcaaatctagca
ggtctgctctcccggcagcaggactcggcccgcggcgtgagccaccattctcggctgaag
atccattttaagaagatttattcctctatgatggagaagtatgaaaaaattgggaaaatt
ggagaaggatcctatggagttgttttcaaatgtagaaacagggacacgggtcagattgtg
gccatcaagaagtttctggaatcagaagatgaccctgtcataaagaaaattgcccttcgg
gaaatccgaatgctcaaggccccaagcccctatgctgctgaaccttctctctgtggaatg
aaaatggtaagaagaggaaagaaagaatttctgccagcagtggcagaaaaagtagatgct
cctagcggagttggaggtcaaggacaggacagtgtcactgtgggatccctgggcagacgt
tctacctatggcagaaaacaagaaaaacaagtgagacaaagagaaggaatcatctactgc
tatgtggcagttttgcttcggatttactattttgaccagggttgtgttgccagggaggaa
gagcagtttcaggagcttgtgtttggccctttctgccatattggctcttacttcacaggt
catagaaccaatgtgaggccttacattttactactatcacggcccagccccttcaagacg
gctgctggtacctatgaggcaggtcttgtcattcttgagtgcagttatttcctcgcagag
caagaaccttattgccctactcaggcactgcaacaacctcatcctattataggtccgtgg
gccctagaaggaggtggggtagaatctaaggaggacaggcatccccctcctaaggaggca
cctgcatcatgtgagggatttttaaggtctgcagtgccgaagcaagcttacaccccattc
aaaaccagccctgacaaaaggcttagtgactgtgttgctacacctccctgggctcctccc
accccacttatcatcagcagtggggtccttgttgccatctgctccatgattgatccagtt
ccagaattccattctgaaggcctgctagctaaggccacttcaggaagtgctggaatcctg
gtatggatatttttatgcaatgatgcttttatttatggaaagtatattctcagaagtgga
gtgctatgggttcgtggtctccctggcttcaagagtgaagctgcagccctttgccataag
tgttacagcagtgcggacccaaagcgtgagcagcagcaagatttattgcaaagagtgaaa
gaacaaagcttccacagtgtgaatggtgcccaggctagacataaaggttctccaagtccc
caccagactcaggagcccagctggcctcacccagtggatcccacaccaggccacaggtgg
agctgcctgccagtcccatgccgtgcgcccgcactcctcagtccttgggtggtcgatggg
accgggtgctgcggagcagggggcggttctgatcgtggaggctcggccgcgcaggagccc
acgcaactcaagcatcccaaccttgttaacctcctggaagtcttcaggaggaaacggagg
cttcacctggtgtttgaatattgtgaccacacagttctccatgagttggacagataccaa
agaggcatatgcaacatctttgtgtgcactggaagaagacttggtgagcacacagaggcc
ttgtccaagaaaaagaaaaaaggaggagggggtcccttcctgaagttgagggcagcctct
tgcaggatcaccctgtttaagaatgttggctgtgggctggaaaccacaggtgatttgagt
ctaaattctggagggggggccgcatctcgaggggtggctgcagctctcagagcacttgtg
tgtgggacagagctgacatctagcgactctccccagaggtgcatacatagagacgtgaag
ccagaaaatatcctcatcacgaaacattccgtgattaagctttgtgactttggatttgct
cggcttttgactggaccgagtgactactatacagactacgtggctaccaggtggtaccgc
tcccctgagctgctggtgggggacacgcagtacggccccccggtggatgtttgggcaatt
ggctgtgtctttgctgagctgctgtcaggagtgcctctgtggccaggaaaatcggatgtg
gatcagctgtatctgattaggaagaccttgggggatctcattcctaggcaccagcaagtg
tttagcacgaatcagtacttcagtggagtgaaaattccagaccctgaagatatgtccctc
tgcctgtcagtaaccctgacagagggaggcctgcttgcttctggggctgtgaaacgctca
cagatgggctccagcgtatcacaggcaaccagttggcctcatccagacattgttgctgag
acagcagagctcgatgatatagcaatggcacgtcaaaccccagtgatgctcagattcaac
cgacagaaagaacaagagaaatatttaagctatggagcatga