GENSCAN 1.0	Date run:  6-Nov-116	Time: 12:30:55

Sequence gi568815586f:49652494_49861780 : 209287 bp : 46.60% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.14 Intr -    834    733  102  0  0   60   82   181 0.973  15.07
 1.13 Intr -   1381   1232  150  1  0  107   53   230 0.991  21.76
 1.12 Intr -   1809   1699  111  0  0  129   99   243 0.999  30.08
 1.11 Intr -   2491   2417   75  1  0   36   77   178 0.989  11.21
 1.10 Intr -   4004   3911   94  1  1  104   78    45 0.994   5.07
 1.09 Intr -   4406   4330   77  2  2  104  113    56 0.999   8.01
 1.08 Intr -   4697   4589  109  1  1  123  110    40 0.974   9.99
 1.07 Intr -   6101   5949  153  1  0   78   96   136 0.994  12.59
 1.06 Intr -   9556   9473   84  0  0  119   84    88 0.858  10.44
 1.05 Intr -  13415  13339   77  2  2   85   92    31 0.928   1.51
 1.04 Intr -  13714  13634   81  1  0   90   67    48 0.789   2.73
 1.03 Intr -  16061  15978   84  2  0   71   80   133 0.570  10.82
 1.02 Intr -  18752  18645  108  2  0   89   29    55 0.111   0.18
 1.01 Init -  35073  35059   15  0  0   77  116    23 0.027   3.71
 1.00 Prom -  35349  35310   40                              -5.66

 2.03 PlyA -  35580  35575    6                               1.05
 2.02 Term -  38982  38905   78  0  0   93   44    71 0.014   0.96
 2.01 Init -  54687  54562  126  0  0  104   85   188 0.405  18.49
 2.00 Prom -  58762  58723   40                              -6.16

 3.00 Prom +  61546  61585   40                              -3.26
 3.01 Init +  69021  69030   10  2  1   98  116     8 0.917   5.20
 3.02 Intr +  79070  79224  155  0  2   37  115    20 0.002  -0.61
 3.03 Intr +  99971 100056   86  1  2  133   92   101 0.983  13.62
 3.04 Intr + 100480 100588  109  1  1   80  110   101 0.997  11.79
 3.05 Intr + 103142 103262  121  1  1   81   98     8 0.852   1.17
 3.06 Intr + 105734 105782   49  0  1   94   93    16 0.784   0.44
 3.07 Intr + 105890 105987   98  2  2   86  107    30 0.721   4.35
 3.08 Intr + 106190 106269   80  0  2   94  110   -42 0.841  -2.13
 3.09 Intr + 106728 106828  101  2  2   36  105   106 0.944   6.01
 3.10 Intr + 109211 109286   76  2  1   79   96    66 0.890   6.02
 3.11 Intr + 125485 125547   63  0  0   88   58    56 0.226   1.51
 3.12 Intr + 125746 125869  124  0  1   93   94    48 0.341   6.06
 3.13 Term + 137456 137466   11  0  2  115   37     0 0.007  -4.04
 3.14 PlyA + 137708 137713    6                               1.05

 4.16 PlyA - 138678 138673    6                               1.05
 4.15 Term - 139558 139346  213  1  0   84   55   214 0.974  14.93
 4.14 Intr - 140095 139953  143  2  2  100   81    86 0.996   9.17
 4.13 Intr - 140493 140185  309  1  0  111  101   135 0.862  13.38
 4.12 Intr - 140940 140859   82  0  1   52   76    60 0.815   0.41
 4.11 Intr - 141403 141241  163  0  1   93  115   177 0.997  20.88
 4.10 Intr - 144901 142272 2630  1  2   98   94  1564 0.871 145.36
 4.09 Intr - 149474 149355  120  2  0   27   96   146 0.998   9.99
 4.08 Intr - 150503 150465   39  2  0  110  113    39 0.992   7.02
 4.07 Intr - 150672 150604   69  0  0  103   58    95 0.981   7.38
 4.06 Intr - 151557 151429  129  0  0  101   64   126 0.984  12.39
 4.05 Intr - 153548 153523   26  0  2  144   70    36 0.561   5.14
 4.04 Intr - 156959 156889   71  1  2  100   60    29 0.394   0.13
 4.03 Intr - 162493 162391  103  2  1   44  116    53 0.024   2.93
 4.02 Intr - 173480 173450   31  2  1  128   47    10 0.057  -1.40
 4.01 Init - 175879 175829   51  1  0  107  109    68 0.974   9.98
 4.00 Prom - 182072 182033   40                              -7.76

 5.05 PlyA - 183571 183566    6                               1.05
 5.04 Term - 186522 185878  645  0  0   61   50   306 0.993  18.23
 5.03 Intr - 190645 190361  285  1  0   -3   84   240 0.194  12.04
 5.02 Intr - 198837 198721  117  0  0  103  116   -33 0.634   1.66
 5.01 Init - 200061 200053    9  0  0  125   91     7 0.852   4.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:49652494_49861780|GENSCAN_predicted_peptide_1|440_aa
MKKKKARTPQGGDFAQFFKPRGPSVSSSVHLVEKYEPQLLTSSMNLPPDKARLLRQYDNE
KKWDLICDQERFQVKNPPHTYIQKLQSFLDPSVTRKKFRRRVQESTKVLRELEISLRTNH
IGWVREFLNDENKGLDVLVDYLSFAQCSVMFDFEGLESGDDGAFDKLRSWSRSIEDLQPP
SALSAPFTNSLARSARQSVLRYSTLPGRRALKNSRLVSQKDDVHVCILCLRAIMNYQYGF
NLVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLVRGGHEIILAAFDNFKEVCKELH
RFEKLMEYFRNEDSNIDFMVACMQFINIVVHSVEDMNFRVHLQYEFTKLGLEEFLQKSRH
TESEKLQVQIQAYLDNVFDVGGLLEDAETKNVALEKVEELEEHVSHLTEKLLDLENENMM
RVAELEKQLLQREKELESIK

>gi568815586f:49652494_49861780|GENSCAN_predicted_CDS_1|1320_bp
atgaagaaaaagaaggccaggactccccaagggggtgactttgcccagtttttcaaaccg
aggggaccaagtgtttcctcatcagttcacctggtggagaagtatgagccacagctgctg
acaagctccatgaacctgcctccagacaaggcccggctcctgcggcagtatgacaatgag
aagaaatgggatctgatctgtgaccaggaacgattccaggtgaagaatcctccccacact
tacattcagaaactccagagcttcttggaccccagtgtaactcggaagaagttcaggagg
agggtgcaggagtcaaccaaagtactaagggagctggagatctctcttcgcaccaaccac
attgggtgggtgcgggaatttctgaatgatgaaaacaaaggcctggatgtactggtggat
tacctgtcctttgcccagtgttctgtcatgtttgactttgagggtctggaaagtggtgac
gatggtgcatttgacaaactccggtcctggagcaggtcaatcgaggacctgcagccaccc
agcgccctgtcggcccccttcaccaacagcctcgctcgctctgcgcgccagtctgtgctc
cggtatagcactctccctgggcgcagggccctgaagaactcccgcctagtgagccagaag
gatgacgtccacgtctgtatcctttgtctcagagccatcatgaactatcagtacggattc
aacctggtcatgtcccacccccatgctgtcaatgagattgcacttagcctcaataacaag
aatccaaggaccaaagcccttgtcttagagcttctggcagctgtgtgtttggtgcgagga
ggtcacgaaatcatccttgctgcctttgacaatttcaaagaggtatgcaaggagctgcac
cgctttgagaagctgatggagtatttccggaatgaggacagcaatattgacttcatggtg
gcctgcatgcagttcatcaacatcgtggtgcactcggtggaggacatgaacttccgggtc
cacctgcagtatgagtttaccaagctggggctagaggagttcctgcagaagtcaaggcac
acagagagcgagaagctgcaggtgcagattcaggcatatctggacaacgtgtttgatgtc
gggggtttgttggaggatgctgagaccaagaatgtagccctggagaaggtggaggagttg
gaggagcatgtgtcccatctcacagagaagcttctggacctagagaatgaaaacatgatg
cgggtggcagaactagagaagcagctgctacagcgggagaaggaactagagagcatcaag

>gi568815586f:49652494_49861780|GENSCAN_predicted_peptide_2|67_aa
MGNLESAEGVPGEPPSVPLLLPPGKMPMPEPCELEERFALVLASESCISSLGTAIALEVH
KENKPEL

>gi568815586f:49652494_49861780|GENSCAN_predicted_CDS_2|204_bp
atgggcaacctggagagcgccgagggggtcccgggagagcccccctctgtcccgttgttg
ctgccgcccggcaagatgccgatgcctgagccctgtgagctggaggaaaggttcgccctg
gtgctggccagtgaaagctgcatctccagccttggcacagccatagccctagaagtccac
aaagagaataaacctgagctctag

>gi568815586f:49652494_49861780|GENSCAN_predicted_peptide_3|360_aa
MAEANYIGFTFKIYPESTSHHLYHYHFGVNLLTVLLLPLNLHNLFSNSSQCYCKKSGDCC
TDSGTMNIFDRKINFDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQ
AGLLSALGSLILMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCIAVNPSILP
TAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGNVFFGSIWLFQANLY
VGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITVFRKLMMILAMNEKPGPSP
LSPVAIPYLRDFPIHTNSQPYICKTPQLHLLLVFPLPSQAAGSWLPLEDTALPAMPSESF

>gi568815586f:49652494_49861780|GENSCAN_predicted_CDS_3|1083_bp
atggcggaagcaaattatattggttttaccttcaaaatatatccagaatctacttcccac
cacctctaccactaccactttggtgtgaaccttctaactgtactgcttttacccttgaat
ctccacaatttattttcaaacagcagccagtgttactgtaagaagagtggagactgctgc
acggactctggaaccatgaacatatttgatcgaaagatcaactttgatgcgcttttaaaa
ttttctcatataaccccgtcaacgcagcagcacctgaagaaggtctatgcaagttttgcc
ctttgtatgtttgtggcggctgcaggggcctatgtccatatggtcactcatttcattcag
gctggcctgctgtctgccttgggctccctgatattgatgatttggctgatggcaacacct
catagccatgaaactgaacagaaaagactgggacttcttgctggatttgcattccttaca
ggagttggcctgggccctgccctggagttttgtattgctgtcaaccccagcatccttccc
actgctttcatgggcacggcaatgatctttacctgcttcaccctcagtgcactctatgcc
aggcgccgtagctacctctttctgggaggtatcttgatgtcagccctgagcttgttgctt
ttgtcttccctggggaatgttttctttggatccatttggcttttccaggcaaacctgtat
gtgggactggtggtcatgtgtggcttcgtcctttttgatactcaactcattattgaaaag
gccgaacatggagatcaagattatatctggcactgcattgatctcttcttagatttcatt
actgtcttcagaaaactcatgatgatcctggccatgaatgaaaagcccggcccctctccg
ctgtctccagtggccatcccatatcttcgcgacttccccatccacacgaattcgcagccc
tacatctgcaaaactccccaacttcatcttctcctggtgttccctttgccttcgcaggca
gcaggttcctggctccccctggaggacacggccctccctgcaatgccctcagaatcattt
tag

>gi568815586f:49652494_49861780|GENSCAN_predicted_peptide_4|1392_aa
MDLADPACPGPAQHLISGRTSQELGSPAYNLSLISENIKQPKLEDILQNVDQSLQKCYND
ERGLWGEQLVNEGLTRGQEALAKGRGKVTVLDARGQMSEAMDQPAGGPGNPRPGEGDDGS
MEPGTCQELLHRLRELEAENSALAQANENQRETYERCLDEVANHVVQALLNQKDLREECI
KLKKRVFDLERQNQMLSALFQQKLQLTTGSLPQVCWEQQLRPGGPGPPAAPPPALDALSP
FLRKKAQILEVLRALEETDPLLLCSPATPWRPPGQGPGSPEPINGELCGPPQPEPSPWAP
CLLLGPGNLGGLLHWERLLGGLGGEEDTGRPWGPSRGPPQAQGTSSGPNCAPGSSSSSSS
DEAGDPNEAPSPDTLLGALARRQLNLGQLLEDTESYLQAFLAGAAGPLNGDHPGPGQSSS
PDQAPPQLSKSKGLPKSAWGGGTPEAHRPGFGATSEGQGPLPFLSMFMGAGDAPLGSRPG
HPHSSSQVKSKLQIGPPSPGEAQGPLLPSPARGLKFLKLPPTSEKSPSPGGPQLSPQLPR
NSRIPCRNSGSDGSPSPLLARRGLGGGELSPEGAQGLPTSPSPCYTTPDSTQLRPPQSAL
STTLSPGPVVSPCYENILDLSRSTFRGPSPEPPPSPLQVPTYPQLTLEVPQAPEVLRSPG
VPPSPCLPESYPYGSPQEKSLDKAGSESPHPGRRTPGNSSKKPSQGSGRRPGDPGSTPLR
DRLAALGKLKTGPEGALGSEKNGVPARPGTEKTRGPGKSGESAGDMVPSIHRPLEQLEAK
GGIRGAVALGTNSLKQQEPGLMGDPGARVYSSHSMGARVDLEPVSPRSCLTKVELAKSRL
AGALCPQVPRTPAKVPTSAPSLGKPNKSPHSSPTKLPSKSPTKVVPRPGAPLVTKESPKP
DKGKGPPWADCGSTTAQSTPLVPGPTDPSQGPEGLAPHSAIEEKVMKGIEENVLRLQGQE
RAPGAEVKHRNTSSIASWFGLKKSKLPALNRRTEATKNKEGAGGGSPLRREVKMEARKLE
AESLNISKLMAKAEDLRRALEEEKAYLSSRARPRPGGPAPGPNTGLGQVQGQLAGMYQGA
DTFMQQLLNRVDGKELPSKSWREPKPEYGDFQPVSSDPKSPWPACGPRNGLVGPLQGCGK
PPGKPSSEPGRREEMPSEDSLAEPVPTSHFTACGSLTRTLDSGIGTFPPPDHGSSGTPSK
NLPKTKPPRLDPPPGVPPARPPPLTKVPRRAHTLEREVPGIEELLVSGRHPSMPAFPALL
PAAPGHRGHETCPDDPCEDPGPTPPVQLAKNWTFPNTRAAGSSSDPLMCPPRQLEGLPRT
PMALPVDRKRSQEPSRPSPTPQGPPFGGSRTPSTSDMAEEGRVASGGPPGLETSESLSDS
LYDSLSSCGSQG

>gi568815586f:49652494_49861780|GENSCAN_predicted_CDS_4|4179_bp
atggacctggcggatccggcctgccctggcccagctcaacacctgatttcgggtaggact
tctcaggagttgggctctccagcatataacctcagtctaattagtgagaacatcaaacaa
cccaaattggaggacattctccaaaatgttgaccagtcccttcagaagtgttacaatgat
gaaagaggactctggggggaacagctggtgaatgaggggctcaccaggggccaggaggcc
ttggctaagggccggggcaaggtgaccgttctggatgctagaggccagatgtcagaggcc
atggaccagccagctgggggtcctggaaacccaaggccaggagagggtgatgatggcagc
atggagccaggcacctgccaggagcttctgcaccgactgcgggagctggaggcagagaac
tcggcacttgcccaggccaacgaaaaccagcgggagacttatgagcgctgtctggacgag
gttgccaaccatgtggtacaggcgttgctgaaccagaaggacctgcgagaggagtgcatc
aagctgaagaagagagtgtttgacctggaacggcagaaccagatgctgagtgccctgttt
cagcagaaactccagctcacgacaggctcgctccctcaggtatgttgggagcagcagctg
aggccaggaggcccaggccccccagccgccccacccccagcgctggatgccctatccccg
ttccttcggaagaaggcccagattctggaggtgctgagagccctggaagagactgacccc
ttgcttctctgctcacctgccaccccctggcggcctccaggccaggggcctggctcccca
gagcccatcaacggcgagctgtgtggcccgcctcagcctgaaccctcaccctgggcgccc
tgcctgctgctaggccctggcaacctgggaggcctgctgcactgggagcgcctcttgggg
ggtctgggaggggaagaggacactgggcggccctggggtcctagcaggggacctcctcag
gcccagggcaccagctctggcccaaactgtgccccaggcagcagctcctcctcctcttct
gatgaggcaggtgaccccaatgaggcacccagccccgacaccctgctcggtgccctggcc
cgcagacagttgaacctgggccagctccttgaggacacagagtcttacctacaggccttc
ctggccggggctgcaggcccactcaatggggaccacccaggtcctgggcagtcatcctcc
ccagaccaggcgcccccacagctgtctaagtccaaaggcctccccaagtcagcttggggt
gggggtaccccagaggcccacaggccaggcttcggtgctacctcagagggccaggggccc
ctccccttccttagcatgttcatgggtgctggggatgccccactgggctctcggcctggc
cacccccattcctcatctcaggtgaaaagcaagctccaaattggccccccttctcctggg
gaagctcagggaccccttctgccctctccagctaggggtctcaagtttctaaagctgcct
ccaacctcggagaagagccccagcccaggaggcccgcagctcagtccccagctcccccgg
aactcgcgaatcccctgtcggaacagtggctcagacggcagcccctccccactgttggcc
cgaaggggtctgggtggaggagagctgtccccagagggggcgcaaggcctgcccaccagc
ccttcaccctgctacacaaccccagactccacacagctcagacccccgcagtcagccttg
tccaccacgctgtccccaggcccagtggtgtctccctgctatgagaacattctggacctt
tctcggagcacctttagggggccttccccagagccacctccatccccactgcaggtgccc
acctacccacagctaactctggaggtaccacaggcccctgaggtcctcagaagccctgga
gtaccccccagtccttgcctcccagaatcgtacccctatgggagcccccaagagaagagt
ttggacaaggcaggctcggagtctccccatcccggccgcaggaccccaggcaactcatcc
aagaagcccagccaggggtcaggacggcgacctggggatcctggcagcacacctctgcgg
gacagactggcggccctggggaagctgaagacaggccccgagggggccctgggctcagag
aagaatggggtgccagccaggcctggcaccgaaaagacccggggacctgggaagtcaggg
gagagtgctggagacatggtgccctccatccacaggccactggagcagctagaagccaag
ggggggatacggggggcagtggccttgggcacaaacagcctgaagcagcaggaacctgga
cttatgggggatcccggggcccgagtctactcctctcactccatgggggcccgggtggac
ctggagcctgtctcaccaaggagctgcctcaccaaagtggagctggccaagagccggctg
gcaggggccctgtgcccccaggtaccccgtacccctgccaaagtgccaacctcagcccca
agcctgggcaagcccaataagagccctcacagcagccccaccaagctcccttccaagtca
ccaaccaaggtggtgcctcgacctggggctccgctagtcaccaaggagtcccccaagcct
gacaaagggaagggccctccctgggcagactgtggtagtaccacggcccagtccacaccc
ctagtacctggccccactgacccaagtcagggccctgaggggctggccccacactcagcc
atcgaggagaaggtgatgaagggcattgaggagaacgtgctgcggctccagggccaggag
cgagcccctggcgccgaggtcaagcaccgcaacaccagcagcatcgccagctggttcggc
cttaagaagagcaagctgccagcgctgaaccgccgcacagaggccaccaagaacaaggag
ggggctggcgggggctccccgctccggagggaagtcaagatggaagcccggaagctggag
gccgagagcctcaacatctccaagctgatggccaaggcggaagacctgcgtcgggcactg
gaagaggagaaggcctacctaagcagccgggcccggccacggcctggtggcccagcccca
gggcccaacacggggctggggcaggtgcagggccagctggctggcatgtaccaaggtgca
gacaccttcatgcagcagctgctaaacagggtggatggcaaggagctgccatccaagagc
tggcgggagcccaagcctgagtacggggatttccagccggtgtcttctgaccccaagagc
ccctggccagcctgtgggccccggaatggcctggtgggccctcttcagggctgcggaaaa
cctcctggaaagccgagcagcgagccagggaggcgggaagagatgccctcggaggacagc
ctggccgagccagtgcccacctcacacttcacagcctgtggctccttgactcgaaccttg
gacagtggcattgggaccttcccacccccagaccatggtagcagtgggacccccagcaag
aatcttcctaagaccaagccaccgcggctggatcccccacctggggtacccccagctcgg
cccccaccccttaccaaagtcccccgccgcgcccacacactggagcgggaggtgccaggc
atagaggagctgctggtgagtgggcggcaccccagcatgccagccttccctgcactgcta
cccgctgctccgggccaccggggccatgagacctgtcctgatgatccctgtgaagaccca
ggccccacccctcctgtccagctggccaagaactggaccttccccaatactagggcagcc
ggcagctcctcggaccctctcatgtgcccaccccgacaactggaggggctgcccaggacc
cccatggccctgcccgtggaccggaagcgaagccaggagcccagccgcccgtcccctacg
ccccagggcccacctttcgggggtagccgcacccccagcacttcggacatggccgaggaa
ggcagagtggccagcgggggccccccagggctggagacctcggagtctctcagtgactca
ctctacgactcgctgtcctcttgtgggagtcagggctga

>gi568815586f:49652494_49861780|GENSCAN_predicted_peptide_5|351_aa
MAQIDVYQLIANLVLLIHLPLSHSFEALYHFTSKCLNDYLEKQVPGFRFRHGPEAVLRLM
AVPTELDGGSVKETAAEEESRVLAPGAAPFGNFPHYSRFHPPEQRLRLLPPELLRQLFPE
SPENGPILGLDVGCNSGDLSVALYKHFLSLPDGETCSDASREFRLLCCDIDPVLVKRAEK
ECPFPDALTFITLDFMNQRTRKVLLSSFLSQFGRSVFDIGFCMSITMWIHLNHGDHGLWE
FLAHLSSLCHYLLVEPQPWKCYRAAARRLRKLGLHDFDHFHSLAIRGDMPNQIVQILTQD
HGMELICCFGNTSWDRSLLLFRAKQTIETHPIPESLIEKGKEKNRLSFQKQ

>gi568815586f:49652494_49861780|GENSCAN_predicted_CDS_5|1056_bp
atggcccagattgatgtttatcaactcatagccaatcttgttttacttatacatcttcct
ctctcccattcttttgaagcattatatcattttaccagtaaatgtttaaacgactattta
gagaagcaggttcccggcttccggttccgccacggcccagaggctgtgttgaggctaatg
gcggtgcccacggaactggatggagggagtgttaaggagaccgcagcggaagaggaatcg
cgagttctggcacctggcgccgccccgttcggaaattttcctcattattctcgcttccac
cctccggagcaacggctccgcctcctgcccccggagctgcttcgacagctctttcctgag
agtcccgagaacgggccgattctggggctcgacgtggggtgtaactccggggatctgagt
gtggctctatacaaacacttcctctccctacctgacggggaaacctgctcagatgcctca
agagaattccgtctcctctgctgcgacatagatccagtcctggtgaagcgagccgaaaaa
gaatgtccttttcctgatgccttgacttttatcaccctggacttcatgaatcaaaggacc
cggaaggttctcttgagctctttcttaagccaatttggacgttcagtttttgacattggc
ttctgcatgtcaataaccatgtggattcatctgaatcatggagaccatggcctatgggag
ttcctggcccatctttcctccctctgccactacctccttgtggagccccaaccctggaag
tgttaccgggcagctgcaaggcgtctccgaaagctgggactccatgattttgaccacttc
cactcccttgccatccgaggtgacatgcccaatcagattgtgcagatcttgacccaggat
catggcatggaattaatatgttgctttggcaacaccagttgggacagaagccttctgctc
ttcagggcaaaacaaaccatagagactcatccaatccctgaatcactgatagaaaaaggg
aaagaaaagaacagattaagtttccagaagcagtga