GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:46:57

Sequence gi568815586r:11085996_11286937 : 200942 bp : 37.18% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6298   6455  158  1  2   67   96   145 0.146  11.93
 1.02 Term +  19366  19568  203  2  2   45   44   128 0.270   0.67
 1.03 PlyA +  21382  21387    6                               1.05

 2.00 Prom +  21482  21521   40                              -8.05
 2.01 Sngl +  25625  26830 1206  1  0   62   43   428 0.992  31.27
 2.02 PlyA +  27067  27072    6                               1.05

 3.00 Prom +  28185  28224   40                              -3.45
 3.01 Init +  28312  28515  204  0  0   66   72    99 0.530   5.00
 3.02 Intr +  43579  43677   99  0  0   57   40    98 0.200   1.29
 3.03 Term +  48518  48706  189  1  0  112   38    68 0.361   0.67
 3.04 PlyA +  48977  48982    6                               1.05

 4.03 PlyA -  49064  49059    6                               1.05
 4.02 Term -  62324  61792  533  0  2   67   40   231 0.039   9.62
 4.01 Init -  85604  85427  178  2  1   94   90   350 0.966  35.27
 4.00 Prom -  89855  89816   40                              -4.95

 5.07 PlyA -  90833  90828    6                               1.05
 5.06 Term -  95947  95779  169  0  1   17   43   159 0.180   0.67
 5.05 Intr - 103849 103718  132  0  0   93   26    89 0.116   2.04
 5.04 Intr - 110376 110202  175  1  1   85   19    91 0.175  -0.02
 5.03 Intr - 120636 120485  152  2  2   93   88    12 0.197   0.59
 5.02 Intr - 123423 123256  168  2  0   75   91    65 0.236   3.64
 5.01 Init - 126190 126153   38  1  2   41   81    54 0.220  -0.47
 5.00 Prom - 127096 127057   40                              -3.65

 6.00 Prom + 128403 128442   40                              -6.15
 6.01 Init + 132549 132601   53  2  2   78   82    63 0.667   5.38
 6.02 Term + 135522 136044  523  0  1  -16   48   338 0.978  12.16
 6.03 PlyA + 136375 136380    6                               1.05

 7.00 Prom + 137468 137507   40                              -5.85
 7.01 Init + 156205 156258   54  0  0   72   58    60 0.335   2.73
 7.02 Intr + 166290 166417  128  2  2   20   86   132 0.454   4.76
 7.03 Intr + 170820 171013  194  0  2   84    0   158 0.389   4.81
 7.04 Intr + 171377 171536  160  0  1   24   98   147 0.690   7.42
 7.05 Intr + 171895 172093  199  1  1    1   98   107 0.338   1.43
 7.06 Term + 172327 172470  144  0  0   45   39    98 0.346  -2.47
 7.07 PlyA + 172642 172647    6                               1.05

 8.03 PlyA - 176509 176504    6                               1.05
 8.02 Term - 182153 181198  956  0  2   82   37  1053 0.692  90.83
 8.01 Init - 183674 183611   64  2  1   61  116   125 0.995  12.00
 8.00 Prom - 184133 184094   40                              -1.85

 9.03 PlyA - 184801 184796    6                               1.05
 9.02 Term - 187447 187341  107  2  2   59   42    83 0.249  -1.61
 9.01 Init - 194601 194490  112  0  1   86  115    43 0.831   7.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:11085996_11286937|GENSCAN_predicted_peptide_1|120_aa
XWVRGLADFKREPLTFTVSVAALKDGVDPKSEQQQGLLRREKGQSFHRVKGNPGLDLNIY
VYLIPEFAGMSLFLFKFCDQCQTGKHLNMPVDEINAVFMENMMISKTAQINSYSNTTSLL

>gi568815586r:11085996_11286937|GENSCAN_predicted_CDS_1|363_bp
nngtgggttcgtggtctcgctgacttcaaaagggagccactgaccttcacggtgagtgtt
gctgctcttaaagatggtgtggacccaaagagtgagcaacagcaaggtttattgagaaga
gagaaaggacaaagcttccacagagtgaaaggcaacccaggtcttgaccttaacatctat
gtgtacctgattcctgaatttgcaggaatgtccttgttcctttttaaattctgtgaccaa
tgtcaaacaggaaagcatctcaatatgccagtggatgaaatcaatgctgtctttatggaa
aacatgatgatttccaaaacagctcaaattaactcctattcaaacacaacgtccttgctg
taa

>gi568815586r:11085996_11286937|GENSCAN_predicted_peptide_2|401_aa
MYQNLWDTAKAVFRGKFIALNAHRRKWERSKVDTLASQLKELEKQEQTNLKASRRQEITK
VRAQLKEIETPKTLQKINESRSWFFEKFNKIERQLARLVKKKRENNPIDTIKNNKGDITT
DFREIQTIIREYYKHLYANTLENLEEMDKILDTYNIPSLNQEEVKSLNRPITSSETETVI
NSLATKKSPGTDIFTTKFYQRYKEEMVPFFLKLFKTLEKEGLLLNSFYEASIILIPKPDR
DTAKRENFRPISLMNIDAKILNKILASQIQQHIKRLIHQDQVVFNPGMQGWFNICKSINI
IHHINRTNDKNHMIISTDAEKAFDKIQHAFMLKTLKKLGTDGMYLKILSAIYDKPTANIL
NGQKREAFPLKIGTKQGCHLSPLLFNIVLEILARTIRKRKK

>gi568815586r:11085996_11286937|GENSCAN_predicted_CDS_2|1206_bp
atgtaccagaatctctgggacacagctaaagcagtgtttagagggaaatttatagcacta
aatgcccacaggagaaagtgggaaagatctaaagttgacaccctagcatcacaattaaaa
gaactggagaagcaagagcaaacaaatttaaaagctagcagaagacaagagataactaag
gtcagagcacaactgaaggagatagaaacacctaaaacccttcagaaaatcaatgaatcc
aggagctggttttttgaaaagttcaacaaaatagaaagacagctagccagactagtaaag
aagaaaagagagaataatccaatagacacaataaaaaataataaaggagatattaccact
gacttcagagaaatacaaactatcatcagagaatactataaacacctctatgcaaatacg
ctagaaaatttagaagaaatggataaaatactggacacatacaacatcccaagtctaaac
caggaagaagtcaaatccctgaatagaccaataacaagttctgaaactgagacagtaatt
aatagcctagcaaccaaaaaaagtccaggaacagacatattcacaaccaaattctaccag
aggtacaaagaggagatggtaccattctttctgaaactattcaaaacactggaaaaagag
ggactactccttaactcattttatgaggccagcatcatcctgattccaaaacctgataga
gacacagcaaaaagagaaaattttaggccaatatccttgatgaacatcgatgcgaaaatc
ctcaataaaatactggcaagccaaatccagcagcatataaaaaggcttatccaccaagat
caagtcgtcttcaaccctgggatgcaaggctggttcaacatatgcaaatcaataaacata
atccatcacataaacagaaccaatgacaaaaaccacatgattatctcaacagatgcagaa
aaggcctttgataaaattcaacatgccttcatgctaaaaacactcaagaaactaggtact
gatggaatgtatctcaaaatattaagtgctatttatgacaaacccacagccaatatactg
aatgggcaaaaacgggaagcattccctttgaaaatcggcacaaaacaaggatgccatctc
tcaccactcctgttcaacatagtattggaaattctggccaggacaatcaggaagagaaag
aaataa

>gi568815586r:11085996_11286937|GENSCAN_predicted_peptide_3|163_aa
MEYYAAIKKDEFMSFAGTWMKLETIILSKLTQEQKTKHHIITHNWELNNENTWTQGGHRE
RHTTGPFRMGYRMNADYHKLKSTLTNAFQDVLSSLSRAELLAGIIHTEIDMKPEFSFASM
QTRTCSLPVFAIFPCVTSPSFVFSDFSCLGSFITRYVDRIVNV

>gi568815586r:11085996_11286937|GENSCAN_predicted_CDS_3|492_bp
atggaatactatgcagccataaaaaaggatgagttcatgtcctttgcagggacctggatg
aagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatt
atcactcataattgggagctaaacaatgagaacacatggacacagggaggacacagggaa
cgtcacacaactgggccttttaggatgggttatcgaatgaatgcagactaccataaactt
aaatcaacactcacaaatgctttccaggatgtgctatcttcactgagcagagcagagctt
ctggctggaattattcatactgaaattgacatgaaacctgaattctcatttgctagtatg
caaacaaggacatgttcacttccagtgtttgcaatttttccttgtgtaacctctccatca
tttgtctttagcgacttcagttgcttgggaagttttataacccgatatgtagatcgtata
gtaaatgtctaa

>gi568815586r:11085996_11286937|GENSCAN_predicted_peptide_4|236_aa
MLAPEAVSLVMALNMYLQSDVEDHRARDVEVREVHAQLPGQLEEGEQGAGEPLAEDAVRV
LEVVTRAMRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLVKLISNFSKVSGY
KINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGVQLTRDVKDLFKENYKPLLNE
IKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLTMTFFTELENYFKVH

>gi568815586r:11085996_11286937|GENSCAN_predicted_CDS_4|711_bp
atgctggccccggaggccgttagcttagtcatggctctaaatatgtacctgcaatcggat
gttgaggatcaccgagcccgcgacgtagaagtacgggaagttcatgcgcagctgccaggc
cagctcgaagaaggcgagcagggtgcgggagagccccttgcagaagacgccgtacgagtg
ttggaagttgtgaccagggcaatgaggcaggagaaggaaataaagggtattcaattagga
aaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaatccc
attgtctcagcccaaaatctcgttaagctgataagcaacttcagcaaagtctcaggatac
aaaatcaatgtacaaaaatcacaagcattcttatacaccaataacagacaaacagagagc
caaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggagtc
caacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaa
ataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaat
atcgtgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaag
ctaacaatgactttcttcacagaattggaaaactactttaaagttcactga

>gi568815586r:11085996_11286937|GENSCAN_predicted_peptide_5|277_aa
MTKIQNTDNTKRWSEQSKVPADIKIWRHRVEIQFTDSGLPDCAGIGLLDLTQSTMGMWHL
GHRGRLFPSISLFCIPKKNQELACAFTAIGLKSAIFPGIPRSFGIYLECRMLFRKQYLGG
ETLYSCSDRRLAPETQDRGLCESHEHYDCFLLPPSLQFGNFPFIHQLLSMQEENSGTRSS
IAKDTNGNSLGKENAKRVTISVCVCIIVKEKLSCYPSPHMEKLMNNNKKVAYVVVKRVGG
QFASQRQNWLNEKHIVREQGRQNPVLSLQNHRFAAFG

>gi568815586r:11085996_11286937|GENSCAN_predicted_CDS_5|834_bp
atgaccaaaatccagaacactgacaacacaaaacgctggagtgaacaaagcaaagtgcca
gcagacatcaagatctggaggcacagagtagaaatccagttcactgactctggcttgcct
gattgtgcagggattggtctattagatctgacacaaagcacaatgggaatgtggcattta
ggacacagagggcgcctgttccccagtatatccttattttgcatcccaaaaaagaatcaa
gaattagcttgtgcttttactgccataggcctgaaatcagctatttttccagggatccct
agatcctttgggatctatttagagtgcagaatgctatttcgaaaacagtatctgggaggg
gaaacactgtacagctgtagtgataggcgactggctccagagacccaggacagaggccta
tgtgagagccatgaacattatgattgctttcttcttccaccttctctacagtttgggaac
ttccctttcatccatcagctactttctatgcaagaggaaaatagtggcactagatcttcc
atagctaaagatacaaatggaaattcattaggcaaagaaaatgcaaaaagagtaacaata
tcggtctgtgtttgcataatagtgaaggagaaactctcttgttacccatcaccccacatg
gaaaaactaatgaacaacaacaaaaaagtcgcttatgtggttgttaagagagttggtggc
cagtttgccagtcagcgtcaaaattggctgaatgagaaacacattgttagagaacaaggc
aggcaaaatcctgtcctgtccttgcagaatcatagatttgcagcttttgggtag

>gi568815586r:11085996_11286937|GENSCAN_predicted_peptide_6|191_aa
MDPNKKEIRDLPEKEFKRKISIQGSYLNVVKAIYDKPTTKLILNEEKLKAFSLRTGTRQG
YPLSPLLFNIVLEVLARAIRQEKEIKGIQIGKEQHKLSLFADDMIVYLENPKDSSKKLLD
LINEFSKVSGYKINVCKPVAFLYPNSDQTENQIKNSTPFTIAADVYRNIPNQGDKRPLQG
KLQNTAERNHR

>gi568815586r:11085996_11286937|GENSCAN_predicted_CDS_6|576_bp
atggatccaaacaaaaaagaaatccgtgatttacctgaaaaagaattcaaaagaaaaatc
agcatacaaggatcgtacctcaatgtagtaaaagccatctatgacaaacccacaaccaag
ttaatactgaatgaggaaaaattgaaagcattctctctgagaactggaacaagacaagga
tacccactttcaccacttttattcaatatagtactggaagttttagccagagcaattaga
caagagaaagaaataaagggcatccagattggtaaagaacaacacaaactgtcactgttt
gctgatgatatgattgtatacctagaaaaccctaaagactcctccaaaaagctcctagat
ctcataaatgaattcagcaaagtttcaggatacaaaattaatgtgtgcaaaccagtagcc
ttcctataccccaacagcgaccaaactgagaatcaaatcaagaactcaactccttttaca
atagctgcagatgtatataggaatatacctaatcaaggagataaaagacctctacaagga
aaactacaaaacaccgctgaaagaaatcatagatga

>gi568815586r:11085996_11286937|GENSCAN_predicted_peptide_7|292_aa
MLSETLMGIVAQNIGSLQQLQWSTEVQVGGIRCHQLQGRYQGPIVIRKHEVRDDLLDVFG
SASLKERPQTHSGPYRSKSHLPGTEYLGEGAAVGTASADLNVPAWQPISQLSARALQKDR
LPPQVDKSTMMGRNQCKKPENCKNQNASSPPNDHNSLTAREQNWTENEFDKLTEVGFRSD
GENGTKLENTLQDIIQEKFPNQARQANIQIQEIQRTPQRYSSRRATPKHIIIRFTKAEMK
EKMLRACLTRAPEGSTKHEKEKLVPTTTKTYQIVKTTDIMKKPHQLMGKIIS

>gi568815586r:11085996_11286937|GENSCAN_predicted_CDS_7|879_bp
atgctttctgaaacactgatggggatagtggcccaaaacattggcagtttacaacagtta
caatggtccactgaggttcaagtgggaggaatccgatgtcaccagttgcagggaagatat
caaggtcccattgtcatcagaaagcatgaggtgagagatgatcttttggacgtttttgga
agtgcatctctgaaagaaaggccgcagacccactcggggccttacagatcaaagtcccat
ctccctgggacagagtacctgggggaaggggcagctgtgggcacagcttcagcagactta
aatgttcctgcctggcagccgatctcccagctcagtgctcgagctctgcagaaggacaga
ctgcctcctcaagtagataaatccacgatgatggggagaaaccagtgcaaaaagcctgaa
aattgcaaaaaccagaatgcctcttctcctccaaatgatcataactccttgacagcaagg
gaacaaaactggacagagaatgagtttgacaaattgacagaagtaggcttcagaagtgac
ggggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaaattcccc
aaccaagcaagacaggccaacattcaaattcaagaaatacagagaacacctcaaagatac
tcctcgagaagagcaaccccaaaacatataatcatcagattcaccaaggctgaaatgaag
gaaaaaatgttaagggcctgccttacaagagctcctgaaggaagcactaaacatgaaaag
gaaaaactggtaccaacaactacaaaaacataccaaattgtaaagaccaccgacataatg
aagaaaccccatcagctaatgggcaaaataatcagctag

>gi568815586r:11085996_11286937|GENSCAN_predicted_peptide_8|339_aa
MLLILLSVALLALSSAQSLNEGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPP
PRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQ
GPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGN
QSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNKPQGPPPRPGKPEGPPPQ
GGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPP
PPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPPQ

>gi568815586r:11085996_11286937|GENSCAN_predicted_CDS_8|1020_bp
atgctactgattctgctgtcggtggccctgctggccctgagctcagctcagagcttaaat
gaaggaaagccagaaggacgacgcccacaaggaggaaaccagccccaacgtaccccacct
cctccaggaaagccagaaggacgacccccacaaggaggcaaccagtcccaaggtccccca
cctcgtccaggaaagccagaaggaccacccccacaaggaggaaaccagtcccaaggtccc
ccacctcgtccgggaaagccagaaggacaacccccacaaggaggaaaccagtcccaaggt
cccccacctcgtccgggaaagccagaaggaccacccccacaaggaggaaaccagtcccaa
ggtcccccgcctcgtccgggaaagccagaaggaccacccccacaaggaggaaaccagtcc
caaggtcccccgcctcgtccgggaaagccagaaggaccacccccacaaggaggaaaccag
tcccaaggtcccccgcctcatccgggaaagccagaaggaccacccccacaaggaggaaac
cagtcccaaggtcccccacctcgtccgggaaagccagaaggaccacccccacaaggagga
aaccagtcccaaggtcccccacctcgtccgggaaagccagaaggaccacccccacaagga
ggcaacaaacctcaaggtcccccacctcgtccaggaaagccagaaggaccacccccacaa
ggaggaaaccagtcccaaggtcccccacctcgtccaggaaagccagaaggaccaccttca
caaggaggcaacaaacctcaaggtcccccacctcatccaggaaagccacaaggaccaccc
ccacaagaaggtaacaaacctcaacgtccccctcctccaggaaggccacaaggaccaccc
ccaccaggaggcaatccccagcagcctctgccacctcccgctggaaagccccagggacca
cctccacctcctcaagggggcagaccacacagacctccccagggacagcctccccagtaa

>gi568815586r:11085996_11286937|GENSCAN_predicted_peptide_9|72_aa
MNSSKSKVSKNIKFMVKLGWKKMKSLMVSKKLSYLAHAPTTQDGTPALGPGHRRHLHAEY
ESCVSGVQFILS

>gi568815586r:11085996_11286937|GENSCAN_predicted_CDS_9|219_bp
atgaattcttctaaaagtaaagtgagtaaaaacatcaaatttatggtgaagcttgggtgg
aagaagatgaaatcattgatggtgtccaaaaagttgtcctacttggcacatgccccaacc
actcaggatggtacaccagctctggggccaggacacaggcgacatcttcatgcagaatat
gaaagctgtgtaagcggtgtacaatttatcctttcttag