GENSCAN 1.0	Date run:  8-Nov-116	Time: 08:15:34

Sequence gi568815587r:123653583_123854518 : 200936 bp : 39.81% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +     47    570  524  0  2   79   98   279 0.495  19.74
 1.02 Intr +    659    897  239  1  2   97   47   146 0.404   6.89
 1.03 Intr +   8679   8751   73  0  1  104   89    35 0.084   3.69
 1.04 Term +   9208   9333  126  0  0   99   39   126 0.093   6.10
 1.05 PlyA +  11439  11444    6                               1.05

 2.06 PlyA -  11456  11451    6                               1.05
 2.05 Term -  11723  11554  170  0  2  100   36    98 0.290   2.86
 2.04 Intr -  16085  16037   49  2  1  108   83    37 0.089   2.53
 2.03 Intr -  18430  18352   79  0  1   70   87    44 0.090   1.13
 2.02 Intr -  24716  24625   92  2  2   53   73   116 0.064   4.47
 2.01 Init -  24840  24769   72  0  0   70   58    51 0.719   1.42
 2.00 Prom -  46080  46041   40                              -3.05

 3.04 PlyA -  46197  46192    6                               1.05
 3.03 Term -  48814  48708  107  2  2   55   49   142 0.953   4.59
 3.02 Intr -  50471  50289  183  0  0   12   89   137 0.755   5.04
 3.01 Init -  59966  59726  241  2  1   71   11   126 0.057   1.28
 3.00 Prom -  60527  60488   40                              -4.05

 4.08 PlyA -  60940  60935    6                               1.05
 4.07 Term -  68168  67992  177  2  0  100   55   167 0.808  11.30
 4.06 Intr -  73409  72538  872  0  2  107   -3   740 0.170  56.92
 4.05 Intr -  74013  73894  120  1  0   41   94   104 0.876   5.85
 4.04 Intr -  74740  74551  190  1  1   30   47   234 0.681  11.74
 4.03 Intr -  75632  75472  161  0  2  108   72   134 0.820  12.59
 4.02 Intr -  76327  76033  295  1  1   54   44   314 0.762  19.26
 4.01 Init -  77306  76905  402  2  0   66   68   435 0.955  35.97
 4.00 Prom -  80160  80121   40                              -5.75

 5.00 Prom +  89200  89239   40                              -4.45
 5.01 Init +  90295  90318   24  0  0   93   67    48 0.043   2.78
 5.02 Term + 100352 100699  348  1  0    3   43   484 0.101  28.90
 5.03 PlyA + 100856 100861    6                               1.05

 6.00 Prom + 116061 116100   40                              -3.25
 6.01 Init + 144330 144410   81  2  0   69  115    38 0.478   5.62
 6.02 Intr + 147190 147241   52  0  1   83  105    37 0.325   2.46
 6.03 Term + 148604 148695   92  0  2   54   42    64 0.240  -4.70
 6.04 PlyA + 148825 148830    6                               1.05

 7.04 PlyA - 149876 149871    6                               1.05
 7.03 Term - 152797 151826  972  1  0  123   47   520 0.468  42.46
 7.02 Intr - 174176 173758  419  0  2   42   20   177 0.013  -0.88
 7.01 Init - 175445 175019  427  2  1   81   53   246 0.759  16.91
 7.00 Prom - 183157 183118   40                              -3.65

 8.04 PlyA - 184313 184308    6                               1.05
 8.03 Term - 188057 187373  685  1  1   77   41   369 0.016  23.21
 8.02 Intr - 197659 197546  114  0  0   46   64    81 0.147   0.14
 8.01 Init - 198975 198911   65  0  2   55   98    80 0.545   6.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  24716  24546  171  2  0   53   44   165 0.841   5.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:123653583_123854518|GENSCAN_predicted_peptide_1|320_aa
XTHRGKPARALFCHQRHQCVIIVSIVTVTCIRHGEVLVLTPVDKHERSQGKQSIEGRHLL
GLAASKATQRDSLGQGLRPLRFFRGNPLGRTAPRGRLSDRRKGRAPVPGEALGAFGAGWG
LWALSDPTGPPQFEGADQPLRARSRRRSAPRTVASPPTPELQLPLAPLPRSFAPRDRLRS
DWNPPSPAAPASSALTASPAGRDPTPEAAGAARLGYRMRSTSVPSTPALGSLGRCSGAGK
EAAAPVRPAMSEVGGCTVQAVSGSTILGSGGWWPCLPGQAQHHVEAAKAWGWHPMKPQPE
LYISPFQPQLEQLEHRTPSP

>gi568815587r:123653583_123854518|GENSCAN_predicted_CDS_1|963_bp
natacgcacagaggcaagccagccagagctcttttctgtcaccaacgacatcaatgtgtt
attattgttagcattgttactgttacctgcatccggcatggcgaggtgctggtacttacc
ccagtagataagcacgagagaagccaggggaaacaatctattgaaggcaggcatcttctg
gggctggcggcttccaaggctacacagagagattccctcggtcaaggactgcgccctctc
agattctttcgaggaaaccctttgggacgaactgcccccagggggcgactttctgaccga
aggaagggccgagcaccggtgcctggggaggccctgggagcttttggagccgggtggggg
ctttgggccctaagcgaccccactggacctccccagttcgagggagccgatcagccgctc
cgcgcccgctctcgccggcgctcagcaccacggacagtcgcctccccgcccaccccggaa
ctccagcttccactcgcgcccctgcctcgctcgtttgcgcccagggatcggttgcgttcc
gactggaatcctcccagccccgcggctcctgcttcgtccgccctaactgcttctccagct
gggcgtgaccccactcccgaagccgccggggccgcccgtctgggctacagaatgcgttcc
acgtcggtcccgtccacgcccgccctcggctccctggggaggtgcagcggggccgggaag
gaagcggcagctcccgttcggccggcgatgtcagaggttggggggtgcacagtgcaagct
gtcagtggatctaccattctggggtctggaggatggtggccttgtcttccaggacaggct
caacaccatgtggaagctgccaaggcttggggctggcaccccatgaagccacagcctgag
ctctacatcagcccctttcagccacagctagagcagctggaacacaggacaccaagtccc
tag

>gi568815587r:123653583_123854518|GENSCAN_predicted_peptide_2|153_aa
MQEIVRDNHVQQLKWGHKRETCGEPGAAVGHRGPQSGGQAECRAEEGQNHLRPTRGSQQA
DKNSNSQIKVKMTPSLWAEGQRTAKHPITFNPVQQNIHSLVKEALLFPLFILGLVYKAFP
GHTAAGKSGFMRVVTERNQRIENEEWVALPHIS

>gi568815587r:123653583_123854518|GENSCAN_predicted_CDS_2|462_bp
atgcaggaaattgtgagagacaatcatgtccagcagctaaagtggggacacaaaagagaa
acttgcggagagcctggagctgctgttggtcatcggggcccacagtctggaggacaagct
gaatgcagagcagaggagggccagaaccacctaagacccacaagagggagccaacaggct
gacaagaacagcaattcccagatcaaggtcaaaatgacaccatcgctgtgggcagaaggg
cagagaactgccaaacatccaataactttcaatccagtccagcaaaacatacatagccta
gttaaagaggcccttctctttcctcttttcatcctggggttggtgtacaaggcctttcct
ggccatacggctgctgggaaatctggtttcatgagagtggtgactgagagaaatcaaaga
atagaaaatgaagaatgggtggctctgccacatataagttaa

>gi568815587r:123653583_123854518|GENSCAN_predicted_peptide_3|176_aa
MGKDFMTKTPKAMATKAKIDKWDLIKLKSFCTAKETIIRVNRQPTEWEKIFAIYPSDKGL
ISRIYKEHKHIYKKKTTPSKNNSSSNVAQGSQKFGHPCSRGSKGEADPCLFQLLVAAGVA
FPGCGCIAPNPSFTFTWHPASAERQPEAATAAAPISAFRPPPRGRGQGGHVAGKAT

>gi568815587r:123653583_123854518|GENSCAN_predicted_CDS_3|531_bp
atgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtg
aacagacaacctacagaatgggagaaaatttttgcaatctatccatctgacaaagggcta
atatccagaatctacaaggaacataagcacatttacaagaaaaaaacaaccccatcaaaa
aacaattcttcttccaatgtggcccagggaagccaaaagtttggacacccctgttctagg
ggctcaaagggagaagctgatccttgcctcttccagcttctggtggctgctggtgtggca
ttccccggctgtggctgcatcgctccaaacccttccttcacctttacgtggcatcctgct
tcagctgaacgtcagccagaggcagcaactgcagccgcccccatctcagctttccggcca
cctcccaggggacgtgggcagggaggccacgtggcaggaaaagcgacctag

>gi568815587r:123653583_123854518|GENSCAN_predicted_peptide_4|738_aa
MATAVEPEDQDLWEEEGILMVKLEDDFTCRPESVLQRDDPVLETSHQNFRRFRYQEAASP
REALIRLRELCHQWLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTL
VEGLQKQPRRPRRWASSPKISSRDNQELPPDSMVTGSWNYSQVTVHVHGQEVLSEETVHL
GVEPESPNELQDPVQSSTPEQSPEETTQSPDLGAPAEQRPHQEEELQTLQESEVPVPEDP
DLPAERSSGDSEMVALLTALSQVCPSYLCTTENLFEEPLGISHTKQGQNTRLPVASRFDE
ILMWFQGLVTFKDVAVCFSQDQWSDLDPTQKEFYGEYVLEEDCGIVVSLSFPIPRPDEIS
QVREEEPWVPDIQEPQETQEPEILSFTYTGDRSKDEEECLEQEDLSLEDIHRPVLGEPEI
HQTPDWEIVFEDNPGRLNERRFGTNISQVNSFVNLRETTPVHPLLGRHHDCSVCGKSFTC
NSHLVRHLRTHTGEKPYKCMECGKSYTRSSHLARHQKVHKMNAPYKYPLNRKNLEETSPV
TQAERTPSVEKPYRCDDCGKHFRWTSDLVRHQRTHTGEKPFFCTICGKSFSQKSVLTTHQ
RIHLGGKPYLCGECGEDFSEHRRYLAHRKTHAAEELYLCSECGRCFTHSAAFAKHLRGHA
SVRPCRCNECGKSFSRRDHLLYISPRQVQGTTNEKISGRGLQQLLGAWVHLRNLGNRSTE
KQFHGKRAVGQLNNPSKQ

>gi568815587r:123653583_123854518|GENSCAN_predicted_CDS_4|2217_bp
atggctacagccgtggaaccagaggaccaggatctttgggaagaagagggaattctgatg
gtgaaactggaagatgatttcacctgtcggccagagtctgtcttacagagggatgacccg
gtgctggaaacctcccaccagaacttccgacgcttccgctaccaggaggcagcaagccct
agagaagctctcatcagactccgagaactttgtcaccagtggctgagaccagagaggcgg
acaaaggagcagatcctagagctgcttgtgctggaacaatttcttaccgtcctacctgga
gaactacagagctgggtgcggggccaacggccagaaagtggcgaggaggcagtgacgctg
gtggagggtttgcagaaacaacccaggagaccaaggcggtgggcatcttctcctaaaata
agctcccgtgacaaccaagaacttcctcctgactccatggtgactggaagttggaattat
tcccaggtgactgtccatgttcacggccaggaagtcctgtcagaggagacggtgcattta
ggagtggagcctgagtcacctaatgagctgcaggatcctgtgcaaagctcgacccccgag
cagtctcctgaggaaaccacacagagcccagatctgggggcaccggcagagcagcgtcca
caccaggaagaggagctccagaccctgcaggagagcgaggtcccagtgcccgaggaccca
gaccttcctgcagagaggagctctggagactcagagatggttgctcttcttactgctctg
tcacaggtgtgccctagttacctctgtaccacagagaatttgtttgaagaaccactgggc
ataagccatactaaacagggacaaaatacgaggctacccgtagcatcacgttttgatgaa
atccttatgtggtttcagggactggtaacgttcaaggatgtggccgtatgcttttcccag
gaccagtggagtgatctggacccaacacagaaagagttctatggagaatatgtcttggaa
gaagactgtggaattgttgtctctctgtcatttccaatccccagacctgatgagatctcc
caggttagagaggaagagccttgggtcccagatatccaagagcctcaggagactcaagag
ccagaaatcctgagttttacctacacaggagataggagtaaagatgaggaagagtgtctg
gagcaggaagatctgagtttggaggatatacacaggcctgttttgggagaaccagaaatt
caccagactccagattgggaaatagtctttgaggacaatccaggtagacttaatgaaaga
agatttggtactaatatttctcaagtgaatagttttgtgaaccttcgggaaactacaccc
gtccaccccctgttagggaggcatcatgactgttctgtgtgtggaaagagcttcacttgt
aactcccaccttgttagacacctgaggactcacacaggagagaaaccctataaatgtatg
gaatgtggaaaaagttacacacgaagctcacatcttgccaggcaccaaaaggttcacaag
atgaacgcgccttacaaatatcccctaaaccggaagaatttggaagagacctcccctgtg
acacaggctgagagaactccatcagtggagaaaccctatagatgtgatgattgcggaaag
cacttccgctggacttcagaccttgtcagacatcagaggacacatactggagaaaaaccc
ttcttttgtactatttgtggcaaaagcttcagccagaaatctgtgttaacaacacaccaa
agaatccacctgggaggcaaaccctacttgtgtggagagtgtggtgaggacttcagtgaa
cacaggcggtacctggcgcaccggaagacgcacgctgctgaggaactctacctctgcagc
gagtgcgggcgctgcttcacccacagcgcagcgttcgccaagcacttgagaggacacgcc
tcagtgaggccctgccgatgcaacgaatgtgggaagagcttcagtcgcagggaccacctc
ttgtacatctctcctagacaagtccaaggaactactaacgagaagatttcaggaagaggc
ctacagcaattgcttggtgcttgggttcatttgcggaatcttggcaacaggtctacagag
aagcagttccacggcaaaagagctgtggggcagttgaataatccatccaaacaatga

>gi568815587r:123653583_123854518|GENSCAN_predicted_peptide_5|123_aa
MEDEDTDQEFQNAGVYAGGFQTGPNITVEMTDNIIATEWQLDEQHRLTKDNGEAHHPGAQ
GQLQAEFAGHDGGVVKGIADGEVAVKRHDSEDQELGGAHEEVEEGLQQAAGHADYCSCHY
KGS

>gi568815587r:123653583_123854518|GENSCAN_predicted_CDS_5|372_bp
atggaggatgaggacactgaccaggagttccaaaatgctggtgtctatgcaggcggcttt
caaactgggcccaacatcacagtagaaatgactgataacattattgccacagaatggcaa
ctggatgagcagcatcgtctgacaaaagacaatggtgaagcccaccacccaggagctcag
ggccagctgcaggcagagtttgctggtcatgatggtggggtggtgaaggggattgcagat
ggtgaggtagcggtcaaaagacatgatagtgaggatcaagaactcggtggtgcccacgaa
gaagtggaagaaggcctgcagcaggcagcaggacatgcagattactgttcttgccactac
aaaggttcctag

>gi568815587r:123653583_123854518|GENSCAN_predicted_peptide_6|74_aa
MRKFLKGTKQGHSGSSCFRPALPDGLQLCNTVNLLIASPLIGKGDWCGQEEIRSHLLPVI
LCAKERRMNENYLL

>gi568815587r:123653583_123854518|GENSCAN_predicted_CDS_6|225_bp
atgaggaaatttttgaagggcaccaagcaaggacattcaggcagctcatgcttcaggcct
gcactccctgatggcttacagttgtgcaacacagtgaacttgctaattgcttctcctctg
attggaaaaggagattggtgtggccaagaagaaattcggtcacatctcctacctgttatc
ctgtgcgcaaaggaaagaagaatgaatgaaaactatcttttatag

>gi568815587r:123653583_123854518|GENSCAN_predicted_peptide_7|605_aa
MARELRDACTSFNSRCNQVEEKVSVIEHQINEIKQEDKVREKRVKRNEQSLQEIWDCVKR
PNLCLIGVPESDGENGTKLENTLQDIIQENFPNLARQANIQIQEIQRTPQRYSSRREIPR
HITVRFTKVEIKEKMLRAAREKDRSMRQKVNKDIQDLNSALHQADLIDIYRTLHPKSSEY
TFFSAPHCTYSKIGHIIGSEALLSKCKRTEITTNRLSDHSAIILELRTKKLTQNRTTTWK
LNNLLLNDYWVNNEMKAGIKIFFETNENKDTTYQNLWDTFKAGNPAHHIVVVMGNWSTVT
EITLIAFPALLEIRISLFVVLVVTYTLTATGNITIISLIWIDHRLQTPMYFFLSNLSFLD
ILYTTVITPKLLACLLGEEKTISFAGCMIQTYFYFFLGTVEFILLAVMSFDRYMAICDPL
HYTVIMNSRACLLLVLGCWVGAFLSVLFPTIVVTRLPYCRKEINHFFCDIAPLLQVACIN
THLIEKINFLLSALVILSSLAFTTGSYVYIISTILRIPSTQGRQKAFSTCASHITVVSIA
HGSNIFVYVRPNQNSSLDYDKVAAVLITVVTPLLNPFIYSLRNEKVQEVLRETVNRIMTL
IQRKT

>gi568815587r:123653583_123854518|GENSCAN_predicted_CDS_7|1818_bp
atggcacgagaacttcgtgacgcatgcacaagcttcaatagccgatgcaatcaagtggaa
gaaaaggtatcagtgattgaacatcaaattaatgaaataaagcaagaagataaagttaga
gaaaaaagagtaaaaagaaatgaacaaagcctccaagaaatatgggactgtgtgaaaaga
ccaaatctatgtttgattggtgtacctgaaagtgatggggagaatggaaccaagttggaa
aacactcttcaggatattatccaggagaacttccccaacctagcaaggcaggccaacatt
caaattcaggaaatacagagaacaccacaaagatactcctcgagaagagaaatcccaaga
cacataactgtcagattcaccaaggttgaaatcaaggaaaaaatgttaagggcagccaga
gagaaagacagatcgatgagacagaaggttaataaggatatccaggacttgaactcagct
ctgcaccaagcagacctaatagacatctatagaactctccaccccaaatcatcagaatat
acattcttctcagcaccacattgcacctattctaaaattggccacataattggaagtgaa
gcactcctcagcaaatgtaaaagaacagaaatcacaacaaaccgtctctcagaccacagt
gcaatcatattagaactcaggactaagaaactcactcaaaaccgcacaactacatggaaa
ctgaacaacctgctcctgaatgactactgggtgaataatgaaatgaaggcaggaataaag
attttctttgaaaccaatgaaaacaaagacacaacataccagaatctctgggacacattt
aaagcaggaaaccctgcccaccatatagtagttgtcatgggaaactggagcactgtgact
gaaatcaccctaattgccttcccagctctcctggagattcgaatatctctcttcgtggtt
cttgtggtaacttacacattaacagcaacaggaaacatcaccatcatctccctgatatgg
attgatcatcgcctgcaaactccaatgtacttcttcctcagtaatttgtcctttctggat
atcttatacaccactgtcattaccccaaagttgttggcctgcctcctaggagaagagaaa
accatatcttttgctggttgcatgatccaaacatatttctacttctttctggggacggtg
gagtttatcctcttggcggtgatgtcctttgaccgctacatggctatctgcgacccactg
cactacacggtcatcatgaacagcagggcctgccttctgctggttctgggatgctgggtg
ggagccttcctgtctgtgttgtttccaaccattgtagtgacaaggctaccttactgtagg
aaagaaattaatcatttcttctgtgacattgcccctcttcttcaggtggcctgtataaat
actcacctcattgagaagataaactttctcctctctgcccttgtcatcctgagctccctg
gcattcactactgggtcctacgtgtacataatttctaccatcctgcgtatcccctccacc
cagggccgtcagaaagctttttctacctgtgcttctcacatcactgttgtctccattgcc
cacgggagcaacatctttgtgtatgtgagacccaatcagaactcctcactggattatgac
aaggtggccgctgtcctcatcacagtggtgacccctctcctgaacccttttatctacagc
ttgaggaatgagaaggtacaggaagtgttgagagagacagtgaacagaatcatgaccttg
atacaaaggaaaacttga

>gi568815587r:123653583_123854518|GENSCAN_predicted_peptide_8|287_aa
MAEGEEEASTSHGESRSKMEEGHRGWQPCVQQQPAPTTGIANVTMNRNATAPLPLVPYHR
TRRPYLLLGASPKLISFVFLGTVEFILLAVMSFDCYVAICDPLHYTIIMNSRACLLLVLG
CWVGAFLSVLCPTIVVSRLPFCYKEISHFFCDITPLLHVSCIDTHFIEMINFLLSSLILL
TSLVLTTVSYIYIISTILHIPSAQGRRKAFSTCASHITVISIAYISNIFRYVRPSQSHSM
GFDKVTAVPTMVTPLLNPFTYSLRNEKVKAVLKEAVSKIMSSWHRRT

>gi568815587r:123653583_123854518|GENSCAN_predicted_CDS_8|864_bp
atggcagaaggtgaagaggaagccagcacatcacatggtgagagcagaagcaagatggag
gaggggcacagaggctggcagccctgtgtgcaacagcagcctgcccccaccacgggcatt
gccaatgtgaccatgaataggaatgccacagctccactcccactggtaccctaccacagg
acaagaagaccatatcttttgctgggtgcatcacccaaacttatttcctttgttttcttg
gggacagtggagtttatcctcttggcagtgatgtcctttgactgctacgtggccatctgt
gaccccctgcactacaccattatcatgaacagcagggcctgcctcctactagttctgggc
tgctgggttggagccttcctgtctgtgttgtgcccaaccattgtggtgtccagattgcct
ttctgttacaaggaaattagtcacttcttctgtgacatcacccctctgctacatgtgtcc
tgtatagacactcatttcatcgagatgataaacttcctcttatcttccctcatcctcctg
acctcactggtgctcaccactgtgtcctacatctacatcatttctaccatcctgcacatc
ccctcagcccaaggacgtcggaaggccttttccacgtgcgcttcccacatcaccgtcatt
tccatcgcttatataagcaacatcttcaggtatgtgaggcccagccagagtcattcaatg
ggttttgacaaggtgacagctgtccccacaatggtgacccctcttctgaatcccttcact
tatagtctaagaaatgaaaaggtaaaggcagtcttgaaagaagcagtcagcaaaattatg
tcctcatggcacaggagaacttaa