GENSCAN 1.0	Date run:  8-Nov-116	Time: 01:34:46

Sequence gi568815587f:117994816_118217455 : 222640 bp : 48.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    774    895  122  1  2   64  105   230 0.773  22.51
 1.02 Term +   3900   4826  927  2  0  132   41   624 0.591  54.26
 1.03 PlyA +   6645   6650    6                               1.05

 2.05 PlyA -   8838   8833    6                               1.05
 2.04 Term -  19065  18966  100  2  1   76   44   176 0.958   9.60
 2.03 Intr -  19926  19893   34  1  1  105  117    -2 0.965   1.68
 2.02 Intr -  20994  20878  117  1  0   68   96   173 0.969  16.54
 2.01 Init -  22933  22924   10  1  1   85   74    16 0.711  -0.37
 2.00 Prom -  24276  24237   40                              -3.86

 3.03 PlyA -  25651  25646    6                               1.05
 3.02 Term -  42522  42286  237  0  0   90   54   201 0.940  13.07
 3.01 Init -  56933  56889   45  2  0   79   91    33 0.113   1.43
 3.00 Prom -  59908  59869   40                              -3.76

 4.00 Prom +  74701  74740   40                              -2.66
 4.01 Init +  80181  80242   62  2  2   93  103    45 0.249   5.74
 4.02 Intr +  90698  90725   28  2  1   71   87    27 0.023  -0.98
 4.03 Intr + 100007 100040   34  1  1  142  123    16 0.967   8.30
 4.04 Intr + 104170 104283  114  2  0  113   89   115 0.997  14.52
 4.05 Intr + 104888 104943   56  0  2  107   42    96 0.887   5.60
 4.06 Intr + 105366 105435   70  2  1   97   17    47 0.324  -2.75
 4.07 Intr + 108286 108438  153  2  0  100  109   148 0.517  18.14
 4.08 Intr + 109876 110005  130  2  1   82   91   102 0.996   9.65
 4.09 Intr + 112926 113060  135  0  0   78  106   135 0.729  13.98
 4.10 Intr + 114041 114081   41  2  2   79   97    -8 0.799  -2.93
 4.11 Intr + 116926 117085  160  2  1   89  110   146 0.965  15.95
 4.12 Intr + 118454 118620  167  2  2  104   94   263 0.999  28.10
 4.13 Intr + 120014 120112   99  0  0   85  107    36 0.971   5.28
 4.14 Intr + 120323 120465  143  0  2   49   75   232 0.999  18.07
 4.15 Intr + 122490 122639  150  2  0  111  116   102 0.987  15.66
 4.16 Intr + 130480 130562   83  0  2  102   61    51 0.223   2.24
 4.17 Term + 134639 134693   55  2  1  113   43    18 0.113  -3.17
 4.18 PlyA + 138505 138510    6                               1.05

 5.14 PlyA - 138582 138577    6                               1.05
 5.13 Term - 142305 142212   94  2  1  144   52   107 0.645  10.00
 5.12 Intr - 146521 146392  130  2  1   39   81   317 0.996  25.85
 5.11 Intr - 149246 149018  229  2  1   94   26   331 0.987  24.94
 5.10 Intr - 150414 150242  173  1  2   42   87   333 0.977  28.26
 5.09 Intr - 151103 150866  238  2  1   87   31   120 0.777   3.39
 5.08 Intr - 160066 160029   38  2  2  104   82    36 0.262   2.58
 5.07 Intr - 161598 161493  106  0  1  101   47    26 0.197  -0.41
 5.06 Intr - 171391 171355   37  0  1   91   91    41 0.234   2.96
 5.05 Intr - 172271 172076  196  0  1  105   11   346 0.051  27.07
 5.04 Intr - 173480 173270  211  2  1   70   67   378 0.978  32.39
 5.03 Intr - 173936 173770  167  0  2   90  101   247 0.830  25.88
 5.02 Intr - 174773 174733   41  1  2   97   97    -6 0.229  -0.93
 5.01 Init - 179683 179595   89  1  2   89   80    22 0.106   1.64
 5.00 Prom - 182987 182948   40                              -5.36

 6.12 PlyA - 183364 183359    6                               1.05
 6.11 Term - 185845 185725  121  0  1   39   47   171 0.923   6.05
 6.10 Intr - 197273 197173  101  2  2   55   73    58 0.361  -0.09
 6.09 Intr - 198788 198579  210  2  0   44   59    86 0.306   0.41
 6.08 Intr - 202006 201920   87  1  0   86   81   133 0.951  12.57
 6.07 Intr - 203276 203183   94  1  1   95   51    68 0.937   3.77
 6.06 Intr - 205797 205659  139  1  1   65   77    94 0.887   5.52
 6.05 Intr - 208850 208613  238  2  1   99   -6   261 0.779  14.99
 6.04 Intr - 211176 211067  110  1  2   95   87   -11 0.508  -0.50
 6.03 Intr - 215897 215672  226  2  1  103  107   230 0.869  23.96
 6.02 Intr - 217746 217592  155  1  2   73   92    21 0.796   0.79
 6.01 Init - 220051 220009   43  1  1   56  106    70 0.500   4.32

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:117994816_118217455|GENSCAN_predicted_peptide_1|349_aa
XFTVTNVIIFFAFVLLLSGALAYCLALQLYVRRRKKLPSVLLFKKPSPFIFISQRPSPET
QDTIHPLDEEAFLKVSPELKNLDLHGSTDSGFGSTKPSLQTEEPQFLLPDPHPQADRTLG
NREPPVLGDSCSSGSSNSTDSGICLQEPSLSPSTGPTWEQQVGSNSRGQDDSGIDLVQNS
EGRAGDTQGGSALGHHSPPEPEVPGEEDPAAVAFQGYLRQTRCAEEKATKTGCLEEESPL
TDGLGPKFGRCLVDEAGLHPPALAKGYLKQDPLEMTLASSGAPTGQWNQPTEEWSLLALS
SCSDLGISDWSFAHDLAPLGCVAAPGGLLGSFNSDLVTLPLISSLQSSE

>gi568815587f:117994816_118217455|GENSCAN_predicted_CDS_1|1050_bp
natttcaccgtgaccaacgtcatcatcttctttgcctttgtcctgctgctctccggagcc
ctcgcctactgcctggccctccagctgtatgtgcggcgccgaaagaagctacccagtgtc
ctgctcttcaagaagcccagccccttcatcttcatcagccagcgtccctccccagagacc
caagacaccatccacccgcttgatgaggaggcctttttgaaggtgtccccagagctgaag
aacttggacctgcacggcagcacagacagtggctttggcagcaccaagccatccctgcag
actgaagagccccagttcctcctccctgaccctcacccccaggctgacagaacgctggga
aacagggagccccctgtgctgggggacagctgcagtagtggcagcagcaatagcacagac
agcgggatctgcctgcaggagcccagcctgagccccagcacagggcccacctgggagcaa
caggtggggagcaacagcaggggccaggatgacagtggcattgacttagttcaaaactct
gagggccgggctggggacacacagggtggctcggccttgggccaccacagtcccccggag
cctgaggtgcctggggaagaagacccagctgctgtggcattccagggttacctgaggcag
accagatgtgctgaagagaaggcaaccaagacaggctgcctggaggaagaatcgcccttg
acagatggccttggccccaaattcgggagatgcctggttgatgaggcaggcttgcatcca
ccagccctggccaagggctatttgaaacaggatcctctagaaatgactctggcttcctca
ggggccccaacgggacagtggaaccagcccactgaggaatggtcactcctggccttgagc
agctgcagtgacctgggaatatctgactggagctttgcccatgaccttgcccctctaggc
tgtgtggcagccccaggtggtctcctgggcagctttaactcagacctggtcaccctgccc
ctcatctctagcctgcagtcaagtgagtga

>gi568815587f:117994816_118217455|GENSCAN_predicted_peptide_2|86_aa
MLNCEDSISTLGLILGVGLLLLLVSILGYSLAKWYQRGYCWEGPNFVFNLYQIRNLKDLE
MGPPFTISGHISSTDGGYMKFSNGLV

>gi568815587f:117994816_118217455|GENSCAN_predicted_CDS_2|261_bp
atgctgaactgtgaggactccatcagcaccttgggcctgatccttggcgtggggctcttg
ctgctgctcgtgtccatcctcggctacagcctggccaagtggtaccagcgcgggtactgc
tgggaggggcctaattttgtcttcaacttatatcaaatccggaacctgaaggatctggag
atgggtccacccttcaccatcagtggtcacatcagcagcacagatggtggctacatgaag
ttctccaacgggctagtctga

>gi568815587f:117994816_118217455|GENSCAN_predicted_peptide_3|93_aa
MAGFVILPFLWCVLMNQSCKATNGSSNGAPDAVHGPLDRPASLCSDVNDIEGILLRKSQL
HNRYYTPVQQEAVRVVAGQPPQQHLGFPVERGD

>gi568815587f:117994816_118217455|GENSCAN_predicted_CDS_3|282_bp
atggctggctttgttattctccccttcctgtggtgtgttttgatgaatcaaagctgtaaa
gctacaaatggttcttcaaatggagccccagatgcagtccatggacccctggaccggcct
gctagcctatgctctgatgttaatgacatcgaaggcatcctcctgagaaaatctcaactg
cacaaccgctactacaccccagttcagcaggaagcagttagagtggtcgctggccaacct
ccccaacagcacttgggttttcctgttgagaggggggactga

>gi568815587f:117994816_118217455|GENSCAN_predicted_peptide_4|559_aa
MPSSLHAQTAASFLVHHLSTSLKDNSGQAKDPDSDQPLNSLDVKPLRKPRIPMETFRKVG
IPIIIALLSLASIIIVVVLNCKLSGSEQRLEEQGEFLLSDIMSTSEITHVKDQAKNQVLQ
KIKVILDKYYFLCGQPLHFIPRKQLCDGELDCPLGEDEEHCVKSFPEGPAVAVRLSKDRS
TLQVLDSATGNWFSACFDNFTEALAETACRQMGYSSSQLSLPLDVSSKPTFRAVEIGPDQ
DLDVVEITENSQELRMRNSSGPCLSGSLVSLHCLACGKSLKTPRVVGVEEASVDSWPWQV
SIQYDKQHVCGGSILDPHWVLTAAHCFRKHTDVFNWKVRAGSDKLGSFPSLAVAKIIIIE
FNPMYPKDNDIALMKLQFPLTFSGTVRPICLPFFDEELTPATPLWIIGWGFTKQNGGKMS
DILLQASVQVIDSTRCNADDAYQGEVTEKMMCAGIPEGGVDTCQGDSGGPLMYQSDQWHV
VGIVSWGYGCGGPSTPGVYTKVSAYLNWIYNVWKDRTIQRSCNSPGTGLVIQQPAVPLME
LRNDNSLLPIVQGLKTIVS

>gi568815587f:117994816_118217455|GENSCAN_predicted_CDS_4|1680_bp
atgcccagcagccttcatgcccagacagctgcctctttcctggttcatcacctgagcacc
agtttaaaggacaactcaggacaagcaaaagatcctgacagtgatcaacctctgaacagc
ctcgatgtcaaacccctgcgcaaaccccgtatccccatggagaccttcagaaaggtgggg
atccccatcatcatagcactactgagcctggcgagtatcatcattgtggttgtcctcaat
tgcaagctgagtggctctgagcagcggctggaagaacagggcgagtttctgcttagcgat
atcatgagcaccagtgagataacacatgtaaaggaccaagctaaaaaccaagttttgcaa
aagatcaaggtgattctggataaatactacttcctctgcgggcagcctctccacttcatc
ccgaggaagcagctgtgtgacggagagctggactgtcccttgggggaggacgaggagcac
tgtgtcaagagcttccccgaagggcctgcagtggcagtccgcctctccaaggaccgatcc
acactgcaggtgctggactcggccacagggaactggttctctgcctgtttcgacaacttc
acagaagctctcgctgagacagcctgtaggcagatgggctacagcagctcacaactctct
ctccctcttgatgtgagcagcaaacccactttcagagctgtggagattggcccagaccag
gatctggatgttgttgaaatcacagaaaacagccaggagcttcgcatgcggaactcaagt
gggccctgtctctcaggctccctggtctccctgcactgtcttgcctgtgggaagagcctg
aagaccccccgtgtggtgggtgtggaggaggcctctgtggattcttggccttggcaggtc
agcatccagtacgacaaacagcacgtctgtggagggagcatcctggacccccactgggtc
ctcacggcagcccactgcttcaggaaacataccgatgtgttcaactggaaggtgcgggca
ggctcagacaaactgggcagcttcccatccctggctgtggccaagatcatcatcattgaa
ttcaaccccatgtaccccaaagacaatgacatcgccctcatgaagctgcagttcccactc
actttctcaggcacagtcaggcccatctgtctgcccttctttgatgaggagctcactcca
gccaccccactctggatcattggatggggctttacgaagcagaatggagggaagatgtct
gacatactgctgcaggcgtcagtccaggtcattgacagcacacggtgcaatgcagacgat
gcgtaccagggggaagtcaccgagaagatgatgtgtgcaggcatcccggaagggggtgtg
gacacctgccagggtgacagtggtgggcccctgatgtaccaatctgaccagtggcatgtg
gtgggcatcgttagttggggctatggctgcgggggcccgagcaccccaggagtatacacc
aaggtctcagcctatctcaactggatctacaatgtctggaaggatagaactattcagaga
agctgtaactccccagggacaggtcttgtgattcagcaaccagctgtaccgctgatggag
ctacggaatgacaattctctgctgcctattgtccagggtctgaaaaccattgtatcatag

>gi568815587f:117994816_118217455|GENSCAN_predicted_peptide_5|582_aa
MEDATSDEGGDSVGAGLVGMTMEVAKRKGSLSALFLVCCKPEEVPPGRSMEVTVPATLNV
LNGSDARLPCTFNSCYTVNHKQFSLNWTYQECNNCSEEMFLQFRMKIINLKLERFQDRVE
FSGNPSKYDVSVMLRNVQPEDEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPERDSTVAV
IVGASVGGFLAVVILVLMVVKCVRRKKEQKLSTDDLKTEEEGKTDGEGNPDDGAKTVDEA
RLEEQLQGLDAFLRTDRGGSIPCTHSDHLYKVILLQGVNAFQSRSTFDVASPGAKAVFLR
FPGSRLAARGRRTRLAQRGPARTCPSASLPLGTREEPPGRGNERLLDGGPGLRRPRFSSS
PYGTRLFPLLDRPARLFLLPVTLSLEVSVGKATDIYAVNGTEILLPCTFSSCFGFEDLHF
RWTYNSSDAFKILIEGTVKNEKSDPKVTLKDDDRITLVGSTKEKMNNISIVLRDLEFSDT
GKYTCHVKNPKENNLQHHATIFLQVVDRLEEVDNTVTLIILAVVGGVIGLLILILLIKKL
IIFILKKTREKKKECLVSSSGNDNTENGLPGSKAEEKPPSKV

>gi568815587f:117994816_118217455|GENSCAN_predicted_CDS_5|1749_bp
atggaggatgccacaagtgacgagggaggggactctgtcggggctgggcttgtggggatg
actatggaggtggcaaagagaaagggcagcttgtctgccctctttcttgtctgttgcaag
cctgaggaagtgccaccaggacggagcatggaggtcacagtacctgccaccctcaacgtc
ctcaatggctctgacgcccgcctgccctgcaccttcaactcctgctacacagtgaaccac
aaacagttctccctgaactggacttaccaggagtgcaacaactgctctgaggagatgttc
ctccagttccgcatgaagatcattaacctgaagctggagcggtttcaagaccgcgtggag
ttctcagggaaccccagcaagtacgatgtgtcggtgatgctgagaaacgtgcagccggag
gatgaggggatttacaactgctacatcatgaacccccctgaccgccaccgtggccatggc
aagatccatctgcaggtcctcatggaagagccccctgagcgggactccacggtggccgtg
attgtgggtgcctccgtcgggggcttcctggctgtggtcatcttggtgctgatggtggtc
aagtgtgtgaggagaaaaaaagagcagaagctgagcacagatgacctgaagaccgaggag
gagggcaagacggacggtgaaggcaacccggatgatggcgccaagactgtggatgaggcc
agactggaagagcagctccagggtctcgatgccttcctgagaactgacaggggaggaagc
attccatgtacccactctgatcatctgtacaaggtgatcctgctccagggggtgaatgcc
ttccagtctaggtccacttttgatgttgcaagtcctggagcaaaggccgtcttcctgcgg
ttcccagggtcccgtttggcggccagagggcgtcggactcggctggcccagcgaggtcca
gcccgaacgtgtccttctgcctctctgcccctggggaccagggaggagcctccagggcgg
gggaacgagaggctactggacggcggcccgggactgcggcggccgcgtttctcttcttca
ccttacgggacccggctcttccccctcctcgaccgccccgcccgcctcttcctgctcccc
gtaaccctgtcgctggaggtgtctgtgggaaaggccaccgacatctacgctgtcaatggc
acggagatcctgctgccctgcaccttctccagctgctttggcttcgaggacctccacttc
cggtggacctacaacagcagtgacgcattcaagattctcatagaggggactgtgaagaat
gagaagtctgaccccaaggtgacgttgaaagacgatgaccgcatcactctggtaggctct
actaaggagaagatgaacaacatttccattgtgctgagggacctggagttcagcgacacg
ggcaaatacacctgccatgtgaagaaccccaaggagaataatctccagcaccacgccacc
atcttcctccaagtcgttgatagactggaagaagtggacaacacagtgacactcatcatc
ctggctgtcgtgggcggggtcatcgggctcctcatcctcatcctgctgatcaagaaactc
atcatcttcatcctgaagaagactcgggagaagaagaaggagtgtctcgtgagctcctcg
gggaatgacaacacggagaacggcttgcctggctccaaggcagaggagaaaccaccttca
aaagtgtga

>gi568815587f:117994816_118217455|GENSCAN_predicted_peptide_6|507_aa
MFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLS
PGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRL
KGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEE
IVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGN
LVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIVKKTC
GNKSSVNSTVLVKNTKKTNPEIKEKPCHFERCEGEKHIYSPIIVREVIEEEEPSEKSEAT
YMTMWTATDLILGLKCAVPILLVAIVRFDKVSLKNPLAGGIQIGNEEVKLSLFADDIIIN
LENPKDSSKKLLELVTLMQEVGSHGLRQLCPVALQGTASFLAVFMGWQKKEEAGYVKPKI
SGNGAELTCVCGSMDGCAAEWDLAVHA

>gi568815587f:117994816_118217455|GENSCAN_predicted_CDS_6|1524_bp
atgttttgcccactgaaactcatcctgctgccagtgttactggattattccttgggcctg
aatgacttgaatgtttccccgcctgagctaacagtccatgtgggtgattcagctctgatg
ggatgtgttttccagagcacagaagacaaatgtatattcaagatagactggactctgtca
ccaggagagcacgccaaggacgaatatgtgctatactattactccaatctcagtgtgcct
attgggcgcttccagaaccgcgtacacttgatgggggacatcttatgcaatgatggctct
ctcctgctccaagatgtgcaagaggctgaccagggaacctatatctgtgaaatccgcctc
aaaggggagagccaggtgttcaagaaggcggtggtactgcatgtgcttccagaggagccc
aaagagctcatggtccatgtgggtggattgattcagatgggatgtgttttccagagcaca
gaagtgaaacacgtgaccaaggtagaatggatattttcaggacggcgcgcaaaggaggag
attgtatttcgttactaccacaaactcaggatgtctgtggagtactcccagagctggggc
cacttccagaatcgtgtgaacctggtgggggacattttccgcaatgacggttccatcatg
cttcaaggagtgagggagtcagatggaggaaactacacctgcagtatccacctagggaac
ctggtgttcaagaaaaccattgtgctgcatgtcagcccggaagagcctcgaacactggtg
accccggcagccctgaggcctctggtcttgggtggtaatcagttggtgatcattgtggga
attgtctgtgccacaatcctgctgctccctgttctgatattgatcgtgaagaagacctgt
ggaaataagagttcagtgaattctacagtcttggtgaagaacacgaagaagactaatcca
gagataaaagaaaaaccctgccattttgaaagatgtgaaggggagaaacacatttactcc
ccaataattgtacgggaggtgatcgaggaagaagaaccaagtgaaaaatcagaggccacc
tacatgaccatgtggacagccactgatttaattcttggtctgaaatgtgcggttcctata
cttttagttgctattgtaagatttgataaggttagtcttaaaaatcctttggcggggggc
atccaaattggtaatgaggaagtcaaactgtctctgtttgctgatgacataatcataaac
cttgaaaaccctaaagactcatccaaaaagctcctagaactggtcacactgatgcaagaa
gtgggttcccatggtcttcggcagctctgccctgtggctttgcagggtacagcctccttc
ctggctgttttcatgggctggcaaaaaaaagaggaggccggctacgtcaaaccaaaaatc
tctggcaacggggcagagctgacatgtgtctgcggcagcatggatggctgtgctgcagag
tgggacttggcagtgcacgcctaa