GENSCAN 1.0	Date run:  6-Nov-116	Time: 12:34:51

Sequence gi568815587f:62028162_62251973 : 223812 bp : 45.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5477   5518   42  2  0   65  115    57 0.791   3.46
 1.02 Term +   5747   5978  232  2  1   63   42   152 0.901   4.05
 1.03 PlyA +   6721   6726    6                               1.05

 2.05 PlyA -   8964   8959    6                               1.05
 2.04 Term -  27767  27592  176  0  2   61   45   193 0.103  10.22
 2.03 Intr -  36337  36181  157  1  1   83    6   101 0.070   0.98
 2.02 Intr -  37037  36874  164  0  2   93   90    25 0.616   2.89
 2.01 Init -  47870  47822   49  2  1   86   58    46 0.349   0.51
 2.00 Prom -  69578  69539   40                              -3.36

 3.00 Prom +  69977  70016   40                              -3.36
 3.01 Init +  96732  96931  200  2  2   53   85   161 0.342  10.67
 3.02 Intr +  96965  97068  104  2  2   89   43    18 0.511  -2.78
 3.03 Intr +  99990 100140  151  1  1   93   72   130 0.583  11.12
 3.04 Intr + 100609 100722  114  1  0   86   97   132 0.999  13.46
 3.05 Intr + 101621 102429  809  2  2  102   65   902 0.633  80.39
 3.06 Intr + 109671 109722   52  1  1  129   92    52 0.999   7.67
 3.07 Intr + 110552 110609   58  2  1  101   94    50 0.999   5.79
 3.08 Intr + 110727 110844  118  2  1  102  100   164 0.999  19.04
 3.09 Intr + 111526 111658  133  2  1   78   90    16 0.956   0.50
 3.10 Intr + 112047 112142   96  0  0   85   49    90 0.794   3.92
 3.11 Intr + 112543 112660  118  1  1   84  105   148 0.999  16.57
 3.12 Intr + 112752 112883  132  2  0  140  100   147 0.976  21.94
 3.13 Intr + 113339 113350   12  1  0  133   91     3 0.511   0.08
 3.14 Intr + 116821 116930  110  0  2   99   87   239 0.995  23.98
 3.15 Intr + 117008 117128  121  2  1  108   81   306 0.947  32.40
 3.16 Intr + 117468 117602  135  2  0   44   80   223 0.704  17.86
 3.17 Intr + 118497 118741  245  2  2  108   78   518 0.994  49.10
 3.18 Intr + 120315 120393   79  0  1   52  100   219 0.727  19.05
 3.19 Intr + 120578 120685  108  1  0   89   50   231 0.607  19.88
 3.20 Intr + 121896 122046  151  2  1   70   99   138 0.760  12.84
 3.21 Term + 123601 123815  215  2  2   89   54   263 0.999  20.39
 3.22 PlyA + 124146 124151    6                               1.05

 4.00 Prom + 131085 131124   40                              -3.86
 4.01 Init + 132012 132175  164  2  2   70   71    70 0.040   2.71
 4.02 Intr + 134455 134607  153  1  0   61   94    49 0.046   1.99
 4.03 Intr + 141071 141535  465  2  0   91  -69   579 0.450  34.74
 4.04 Term + 141544 141703  160  1  1   19   51   234 0.696  10.21
 4.05 PlyA + 144521 144526    6                               1.05

 5.00 Prom + 150387 150426   40                              -4.96
 5.01 Init + 162124 162178   55  0  1  112   84   116 0.998  13.15
 5.02 Intr + 163895 164082  188  0  2   72   19   112 0.483   2.11
 5.03 Intr + 164304 164352   49  2  1  107   38    87 0.788   3.85
 5.04 Term + 178148 178281  134  0  2   88   42    99 0.192   3.55
 5.05 PlyA + 178681 178686    6                               1.05

 6.00 Prom + 180475 180514   40                              -6.26
 6.01 Init + 180571 180625   55  0  1   91  109   177 0.999  19.56
 6.02 Intr + 182252 182439  188  0  2  115   46   174 0.674  15.31
 6.03 Intr + 199435 199471   37  0  1   73   82    28 0.052  -1.46
 6.04 Intr + 201576 201685  110  1  2   68   76    59 0.124   2.70
 6.05 Term + 204049 204258  210  0  0   54   48    81 0.137  -2.01
 6.06 PlyA + 205851 205856    6                               1.05

 7.00 Prom + 212564 212603   40                              -1.96
 7.01 Init + 214147 214201   55  0  1  114   96   121 0.993  15.33
 7.02 Intr + 215128 215315  188  2  2   88   53   108 0.922   6.71
 7.03 Term + 216182 216349  168  1  0  101   54    23 0.552  -1.92
 7.04 PlyA + 216628 216633    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:62028162_62251973|GENSCAN_predicted_peptide_1|91_aa
XINLFFLNAVTANSRIGGTVKVTPVSDGSVSSQSTQDDVKEKIKNYCLAATLLEQGAPFH
LPLPQPTENGIWSLLSCPNSFLQGDPSRAKA

>gi568815587f:62028162_62251973|GENSCAN_predicted_CDS_1|276_bp
nnaattaatctcttcttcctcaatgctgtcacagcaaatagcaggattggaggaactgtt
aaagtcactcctgtttctgatggcagtgtgagttctcaatctacacaggatgacgtgaaa
gaaaagatcaagaactactgcttggcagccacacttcttgaacaaggagctccatttcac
ctgccattgcctcaacccactgaaaatgggatttggtccctactgagctgtccaaattcc
ttcctccaaggcgatccctcaagagcaaaggcctag

>gi568815587f:62028162_62251973|GENSCAN_predicted_peptide_2|181_aa
MGFHHVAQAGLELLTSGGYPSLVVFIRAFPGKGGRNIGREDQGGEIAHKKAEEIGWALWL
MPVIPALWEAEELALKKFPNLPRLIVGYKTTIPDKILPHTLEEGQLHREVKKNLDRQALL
AFLRIMAVYKWHPKQQHNQAHNKWRLNTGLQGCERRRSAGAEELKLTRQTRTPERVCQQQ
I

>gi568815587f:62028162_62251973|GENSCAN_predicted_CDS_2|546_bp
atggggtttcaccatgttgcccaggctggtctcgaactcctgacctcaggtgggtatcca
agtctggtggtgttcatcagggccttcccaggcaaaggaggaaggaacattggaagagaa
gatcaagggggagaaatagcccacaagaaagcagaagaaataggctgggcgctgtggctc
atgcctgtaatcccagcactttgggaggccgaggagctagccctaaagaaattccccaac
ctacctcgcctaattgtaggttacaagacaaccattccagacaagatcctgccccatacc
ctggaggaaggacagctgcacagagaggtcaagaagaatctagatagacaggccttgctg
gcattcctgaggatcatggctgtctacaagtggcaccccaaacagcaacacaatcaggcg
cacaacaagtggcgtctgaacacaggacttcaaggatgtgagcgaagaaggtctgctgga
gcagaggaactgaaattgacaaggcaaacacggaccccggaacgagtctgccagcagcag
atataa

>gi568815587f:62028162_62251973|GENSCAN_predicted_peptide_3|1086_aa
MSDSGMEYDSVNGSSCYALSAQRCGRRPTYSTLKRTGVIEEDDGAFSLVYGVEEVLERRK
TGECLPRCLHGLKKRFLLLFQEPDSWYTDSFFFRVTSVLTYDRATMGTTAPGPIHLLELC
DQKLMEFLCNMDNKDLVWLEEIQEEAERMFTREFSKEPELMPKTPSQKNRRKKRRISYVQ
DENRDPIRRRLSRRKSRSSQLSSRRLRSKDSVEKLATVVGENGSVLRRVTRAAAAAAAAT
MALAAPSSPTPESPTMLTKKPEDNHTQCQLVPVVEIGISERQNAEQHVTQLMSTEPLPRT
LSPTPASATAPTSQGIPTSDEESTPKKSKARILESITVSSLMATPQDPKGQGVGTGRSAS
KLRIAQVSPGPRDSPAFPDSPWRERVLAPILPDNFSTPTGSRTDSQSVRHSPIAPSSPSP
QVLAQKYSLVAKQESVVRRASRRLAKKTAEEPAASGRIICHSYLERLLNVEVPQKVGSEQ
KEPPEEAEPVAAAEPEVPENNGNNSWPHNDTEIANSTPNPKPAASSPETPSAGQQAGAAP
SCCQGHTSCMAQEGWNLEAVQGAWSSCFYKASTHCSSCQSLAEIAVFTEAKTDQADGPRE
PPQSARFASGKGRKRSYKQAVSELDEEQHLEDEELQPPRSKTPSSPCPASKVVRPLRTFL
HTVQRNQMLMTPTSAPRSVMKSFIKRNTPLRMDPKCSFVEKERQRLENLRRKEEAEQLRR
QKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEE
RLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEEEQ
ERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQ
AERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKALNV
TVDVQSPACTSYQMTPQGHRAPPKINPDNYGMDLNSDDSTDDEAHPRKPIPTWARGTPLS
QAIIHQYYHPPNLLELFGTILPLDLEDIFKKSKPRYHKRTSSAVWNSPPLQGARVPSSLA
YSLKKH

>gi568815587f:62028162_62251973|GENSCAN_predicted_CDS_3|3261_bp
atgtctgactcgggcatggagtatgactcagtaaatgggagcagctgctatgcgctttct
gcacagaggtgtggtaggcgcccaacttacagcaccctgaaaaggacaggagtcatagag
gaggacgatggggccttcagtctggtgtatggtgtggaagaagtgttggagaggaggaag
actggagagtgtcttcctcggtgcttacatgggttgaagaagagatttttgctgctcttc
caggagcctgattcttggtacactgattccttctttttcagggtcacctctgttttaact
tacgacagagccaccatggggacgacggccccagggcccattcacctgctggagctatgt
gaccagaagctcatggagtttctctgcaacatggataataaggacttggtgtggcttgag
gaaatccaagaggaggccgagcgcatgttcaccagagaattcagcaaagagccagagctg
atgcccaaaacaccttctcagaagaaccgacggaagaagagacggatttcttatgttcag
gatgaaaacagagatcccatcaggagaaggttatcccgcagaaagtctcggagcagccag
ctgagctcccgacgcctccgcagcaaggacagtgtagagaagctggctacagtggtcggg
gagaacggctccgtcctgcggcgtgtgacccgtgctgcggctgcagctgccgcggctacc
atggcattggctgcaccttcttcacccacccctgagtctcccacgatgctgactaagaag
cccgaggataaccacacccagtgccagctggtgcctgtggtggagatcggcatcagtgag
cgccagaatgctgagcagcatgtcacccagctcatgtccaccgagcctctgccccgcact
ctgtccccgactccagcttcagccacagctccaacctcccagggcatcccgacatcagat
gaggaatcaacacctaagaagtcgaaggccaggatactggagtccatcacagtgagctcc
ctgatggctacaccccaggaccccaagggtcaaggggtcgggacggggcggtctgcgtct
aagctcaggattgcgcaggtctcccctggcccacgggactcgccagcctttccagattct
ccatggcgggagcgggtgctggctcccatcctgccggataacttctccacgcccacgggc
tctcgcacggactctcaatcggtgcggcacagcccgatcgccccgtcttccccgagtccc
caagtcttagcccagaagtactctctggtggccaaacaggaaagtgttgtccgcagggcg
agcagaaggcttgccaagaagactgccgaagagccagctgcctctggccgcatcatctgt
cacagttacctggagaggctcctgaatgttgaggtgccccagaaagttggttctgagcag
aaggaaccccccgaggaggctgagcctgtggcggcagctgagccagaggtccctgagaac
aatggaaataactcgtggccccacaatgacacggagattgccaacagcacacccaacccg
aagcctgcagccagcagcccggaaacaccctctgcagggcagcaagcgggagctgccccc
tcctgctgtcagggccacaccagctgcatggcccaggaggggtggaatttagaagctgtg
caaggggcttggagctcctgcttctacaaggcgtccacacactgttcttcgtgtcagagc
cttgctgaaattgctgtcttcacagaggccaagacggaccaagcagatggacccagagag
ccaccgcagagtgccaggtttgcatccgggaaggggaggaagcgcagctacaagcaggcc
gtgagtgagctggacgaggagcagcacctggaggatgaggagctgcagccccccaggagc
aagaccccttcctcaccctgcccagccagcaaggtggtacggcccctccggacctttctg
cacacagtgcagaggaaccagatgctcatgaccccgacctcagccccacgcagcgtcatg
aagtcctttattaagcgcaacactcccctgcgcatggaccccaagtgcagcttcgtcgag
aaggagcggcagcgcctggagaatctgcggcggaaggaggaggccgagcagctgcgcagg
cagaaggtggaggaggacaagcggcggcggctggaggaggtgaagctgaagcgtgaggaa
cgcctccgcaaggtgctgcaggcccgcgagcgggtggagcagatgaaggaggagaagaag
aagcagattgagcagaagtttgctcagatcgacgagaagactgagaaggccaaggaggag
cggctggcagaggagaaggccaagaaaaaggcggcggccaagaagatggaggaggtggaa
gcacgcaggaagcaggaagaggaggcacgtaggctcaggtggctgcagcaggtgcgagca
caggaggaggaagagcggcggcaccaagagctgctgcagaagaagaaggaagaggagcag
gagcggctgcggaaggcggccgaggctaagcggctggcagagcagcgggagcaggagcgg
cgggagcaggagcggcgcgagcaggagcggcgcgagcaggagcggcgggagcaggagcgg
cgcgagcaggagcgacagctggcagagcaggagcgtcggcgggagcaggagcggctccag
gccgagagggagctgcaggagcgggagaaggccctgcggctgcagaaggagcagctgcag
agggaactggaggagaagaagaagaaggaagagcagcagcgtctggctgagcggcagctg
caggaggagcaagagaagaaagccaaggaggcagcaggggccagcaaggccctgaatgtg
actgtggacgtgcagtctccagcttgtacctcatatcagatgactccgcaagggcacagg
gcccctcccaagatcaacccagataactacgggatggatctgaatagcgacgactccacc
gatgatgaggcccatccccggaagcccatccccacctgggcccgaggcaccccgctcagc
caggctatcattcaccagtactaccacccaccgaaccttctggagctctttggaaccatt
ctcccactggacttggaggatatcttcaagaagagcaagccccgctatcacaagcgcacc
agctctgctgtctggaactcaccgcccctgcagggcgccagggtccccagcagcctggcc
tacagcctgaagaagcactga

>gi568815587f:62028162_62251973|GENSCAN_predicted_peptide_4|313_aa
MDKFLDTYTLPSLNQEEVESLNRPITSSEIEAAINSLPTKKSSGPDGFTAEFYQRDMNEA
GNHHPQQTNTGTENQTLHVLTHKWEMNKENTWTQRGEHHTLGPVGRRPTSTDSSSLVAES
LAGIRKMATNFSVYEKIWFDKFKYDIAERRLYEQMNGPVASTSRQKNGASVILHDIARAR
ENIQKSLARSSGPRVSSGPNGEHSELVVLIASLEVENQRLSSVVQELQQAMSRLEAQLNV
LEKSSAGHRATVPQTQHVSPIGALAKKPTTPAEDDKGNDIDLFGSNNEEEDEEAAQLREE
WLPFPPVIRKALL

>gi568815587f:62028162_62251973|GENSCAN_predicted_CDS_4|942_bp
atggataaattcctggacacatacaccctcccaagtctaaaccaggaagaagtcgaatcc
ctaaatagaccaataacaagttctgaaattgaggcagcaattaatagcctaccaaccaaa
aaaagttcaggaccagatggattcacagccgaattctaccagagggacatgaatgaagct
ggaaaccatcatcctcagcaaactaacacaggaacagaaaaccaaacactgcacgttctc
actcataagtgggagatgaacaaggagaacacatggacacagcgaggggaacatcacaca
ctggggcctgtcggcaggcgtcccacgtccaccgattcctcctccctcgttgctgagtcc
ttggctggcatcagaaaaatggctacaaacttctcagtatatgagaagatctggtttgac
aagttcaaatatgacattgcagaaaggagattgtacgagcaaatgaacgggcctgtggcc
agcacctcccgccagaagaatggcgccagcgtgatcctccatgacattgcgagagccaga
gagaacatccagaaatccctggccagaagctcaggccccagggtctccagcggccccaac
ggagaacacagcgagcttgttgtcctgatcgccagtctggaagtggagaaccagaggctg
agcagcgtggtgcaggagctgcagcaggccatgtccaggctggaggcccagctgaacgtg
ctggagaagagctctgctggccaccgggccacagtccctcagacccagcacgtgtctccc
attggagccctggccaagaagccaaccacaccagcagaggatgacaagggcaatgacatt
gacctttttggcagcaacaatgaggaggaggacgaggaggcagcacagctgcgggaggaa
tggctgccatttcccccagtaattagaaaagccttattgtga

>gi568815587f:62028162_62251973|GENSCAN_predicted_peptide_5|141_aa
MRLSVCLLLLTLALCCYRANAVVCQALGSEITGFLLAGKPVFKFQLAKFKAPLEAVAAKM
EVKKCVDTMAYEKRVLITKTLVTYLDAVSPECAEDMGNVSLDITIHSSKSQLKQHLLLQA
ALGGLQATAPGQAIYDSIQLL

>gi568815587f:62028162_62251973|GENSCAN_predicted_CDS_5|426_bp
atgaggctgtcggtgtgtctcctgctgctcacgctggccctttgctgctaccgggcaaat
gcagtggtctgccaagctcttggttctgaaatcacaggcttcttattagctggaaaacct
gtgttcaagttccaacttgccaaatttaaggcacctctggaagctgttgcagccaagatg
gaagtgaagaaatgcgtggatacgatggcctatgagaaaagagtgctaattacaaaaaca
ttggtcacctacctggatgccgtgtccccagagtgtgctgaggacatggggaatgtgtcc
ttggacatcaccatccactcatccaagtctcagctgaaacagcacctgctcctacaggct
gccttggggggcttacaggccactgcccctgggcaggccatctatgacagcattcagctg
ttgtga

>gi568815587f:62028162_62251973|GENSCAN_predicted_peptide_6|199_aa
MKLLMVLMLAALLLHCYADSGCKLLEDMVEKTINSDISIPEYKELLQEFIDSDAAAEAMG
KFKQCFLNQSHRTLKNFGLMMMNQRAPENILKRETFKLQIIMQQRFQPIPGEDTAPMPSR
SYSTSTRQNRCTPAVCKHNIGSFVGCRVESLMKSTSLNEDLVHRDYGPADTMLPVPVSES
IILWVLNILTIVTVIPEIG

>gi568815587f:62028162_62251973|GENSCAN_predicted_CDS_6|600_bp
atgaagctgctgatggtcctcatgctggcggccctcctcctgcactgctatgcagattct
ggctgcaaactcctggaggacatggttgaaaagaccatcaattccgacatatctatacct
gaatacaaagagcttcttcaagagttcatagacagtgatgccgctgcagaggctatgggg
aaattcaagcagtgtttcctcaaccagtcacatagaactctgaaaaactttggactgatg
atgatgaatcagagggcccctgaaaacatcttgaaaagagagaccttcaagcttcagata
atcatgcaacaaaggttccagccaattccaggtgaagacaccgccccaatgccatcaaga
agctactccacctccactagacagaacaggtgcacacctgctgtgtgcaagcataacatt
gggtcctttgttggctgcagagttgagtcactgatgaagtccacctctctgaatgaggat
ttggttcatagggattatggaccagcagatacgatgctgccagtccctgtctcagaatcc
attattctttgggtattgaatatcctcaccattgtcactgttatccctgaaattgggtga

>gi568815587f:62028162_62251973|GENSCAN_predicted_peptide_7|136_aa
MKLSVCLLLVTLALCCYQANAEFCPALVSELLDFFFISEPLFKLSLAKFDAPPEAVAAKL
GVKRCTDQMSLQKRSLIAEVLEPGDSKPWDSPGNNLLLLSPTLVTCFHEDPGPHSRITPG
LLAWQEKAAPSPAWVL

>gi568815587f:62028162_62251973|GENSCAN_predicted_CDS_7|411_bp
atgaagctgtcggtgtgtctcctgctggtcacgctggccctctgctgctaccaggccaat
gccgagttctgcccagctcttgtttctgagctgttagacttcttcttcattagtgaacct
ctgttcaagttaagtcttgccaaatttgatgcccctccggaagctgttgcagccaagtta
ggagtgaagagatgcacggatcagatgtcccttcagaaacgaagcctcattgcggaagtc
ctggaaccaggagactccaagccctgggacagcccaggcaataacctcttgctgctctct
ccaaccctcgtcacttgcttccatgaggatcctgggcctcattcccggatcaccccaggg
ctattggcctggcaagaaaaggctgctccatcaccggcatgggtgctgtga