GENSCAN 1.0	Date run:  8-Nov-116	Time: 07:48:54

Sequence gi568815587r:58407179_58608105 : 200927 bp : 37.61% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    210    294   85  2  1   72   56   105 0.688   6.73
 1.02 Term +   6491   7197  707  0  2   28   38   241 0.373   5.79
 1.03 PlyA +   7379   7384    6                               1.05

 2.05 PlyA -   8674   8669    6                               1.05
 2.04 Term -  15452  15154  299  0  2  105   38    68 0.473  -2.06
 2.03 Intr -  15898  15669  230  0  2   72   19   219 0.349   9.99
 2.02 Intr -  20928  20841   88  1  1   85  116    12 0.647   1.81
 2.01 Init -  21277  21124  154  1  1   94   49   112 0.748   8.09
 2.00 Prom -  26145  26106   40                              -5.55

 3.02 PlyA -  28217  28212    6                               1.05
 3.01 Sngl -  32973  32029  945  0  0   52   32   311 0.970  18.19
 3.00 Prom -  46435  46396   40                              -3.65

 4.00 Prom +  50510  50549   40                              -5.05
 4.01 Init +  50693  50768   76  1  1   83   99    54 0.723   7.30
 4.02 Intr +  59348  59436   89  0  2   53   40    53 0.032  -4.23
 4.03 Term +  76592  76813  222  1  0   91   43   165 0.709   8.23
 4.04 PlyA +  77709  77714    6                               1.05

 5.05 PlyA -  78183  78178    6                               1.05
 5.04 Term -  86576  86458  119  0  2   76   47    46 0.022  -2.98
 5.03 Intr -  88677  88597   81  1  0   46   86    85 0.025   2.79
 5.02 Intr -  98455  98291  165  2  0  120   86    27 0.264   4.71
 5.01 Init - 100927 100042  886  1  1  107  -19   480 0.281  33.82
 5.00 Prom - 104528 104489   40                              -5.85

 6.00 Prom + 105422 105461   40                              -9.05
 6.01 Init + 108450 108536   87  2  0   88   88    28 0.212   3.55
 6.02 Term + 120246 120554  309  2  0   35   44   329 0.549  17.28
 6.03 PlyA + 121160 121165    6                               1.05

 7.15 PlyA - 121425 121420    6                               1.05
 7.14 Term - 124921 124686  236  2  2   38   49   213 0.003   7.90
 7.13 Intr - 125763 125632  132  1  0   36   39   165 0.003   6.10
 7.12 Intr - 142689 142608   82  0  1  108   86    15 0.185   1.59
 7.11 Intr - 142968 142795  174  0  0   93   95   115 0.976  11.91
 7.10 Intr - 144054 143887  168  0  0   69  100   124 0.984  10.92
 7.09 Intr - 147762 147663  100  2  1  106  113   152 0.973  18.69
 7.08 Intr - 157023 156977   47  0  2   54   68    43 0.048  -4.81
 7.07 Intr - 163535 163378  158  0  2   83   56   131 0.521   8.21
 7.06 Intr - 166956 166832  125  2  2   66   63   109 0.518   5.51
 7.05 Intr - 171920 171804  117  1  0   68   19   103 0.000   0.06
 7.04 Intr - 172302 172149  154  1  1   21   -6   170 0.000  -0.89
 7.03 Intr - 172817 172639  179  1  2   44   87   110 0.000   5.14
 7.02 Intr - 190776 190636  141  2  0   73   85   126 0.571   9.35
 7.01 Intr - 199723 199618  106  2  1   58  113    30 0.335   0.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 123913 124055  143  0  2   73   98   118 0.893  10.95
S.002 Intr + 124420 124893  474  1  0   -1   36   287 0.801   5.85
S.003 Init - 150073 149988   86  1  2   72   13    57 0.865  -3.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:58407179_58608105|GENSCAN_predicted_peptide_1|263_aa
MEISGDVPCERIYSSSFYFPGEEAIKAAEKLSGSEFTAEFYQRYKEKLVPFLLKLFQSVE
KEGMLHNSFYEASIILIPKPGTDTTKKENFKPISLMNINAKILNKILANRIQQHIKKLIH
HDQVGFISGMQGWFKICKSINVIQHINRTKDKNHMIISIDAEKAFDKIQQPFMLKTLNKL
GLDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNTMLEVLARAIR
QEKEIKGIQSGEEEVKLSLLQMT

>gi568815587r:58407179_58608105|GENSCAN_predicted_CDS_1|792_bp
atggagatctctggagatgtcccctgtgagaggatctacagctcctcattctactttcct
ggtgaagaagcaattaaagctgccgagaagttatctggttccgaattcacggccgaattc
taccagaggtacaaggagaagctggtaccattccttctgaaactattccaatcagtagaa
aaagagggaatgctccataattcattttatgaggccagcatcattctgataccaaagcct
ggcacagacacaacaaaaaaagagaattttaaaccaatatccctgatgaacatcaatgca
aaaatcctcaataaaatactggccaaccgaatccagcagcacatcaaaaagcttatccac
catgatcaagtgggcttcatctctgggatgcaaggctggttcaaaatatgcaaatcaata
aatgtaatccagcatataaacagaaccaaagacaaaaaccacatgattatctcaatagat
gcagaaaaagccttcgacaaaattcaacagcccttcatgctaaaaactctcaataaatta
ggtcttgatgggacgtatctcaaaataataagagctatttatgacaaacccacagccaat
atcatactgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacaggga
tgccctctctcaccactcctattcaacacaatgttggaagttctggccagggccatcagg
caggagaaagaaataaagggtattcaatcaggagaagaggaagtcaaattgtccctgttg
cagatgacatga

>gi568815587r:58407179_58608105|GENSCAN_predicted_peptide_2|256_aa
MACTSAGPYKVQRAILRPLKKRSSNKQSNCCYANDPMRERVHPRLHGLSRGSGFPIPLST
AEAHAILASPFWPCGFLLQSSNLSLVDFGYSSAVTPKVMAGFLRGDKVISYNACAVQMFF
FVALATVENYLLASMAYDRYAAVCKPLHYTTTMTASVVIFISYLFIFITILKMHSAKGHQ
KALSTCASHFTAVSVFYGTVIFIYLQPSSSHSMDTDKMASVFYAMIIPMLNPVVYSLRNR
EVQNAFKKVLRRQKFL

>gi568815587r:58407179_58608105|GENSCAN_predicted_CDS_2|771_bp
atggcatgtacaagtgctggcccttacaaggttcagagagcaatcctcagacctctgaag
aaacgctccagcaataagcagagcaactgctgctatgccaatgaccccatgagggaaaga
gtacatcctaggctccatggcctatcaaggggtagtggattcccaattccattgtccaca
gctgaagcccatgctattcttgcctctccattctggccatgtggattcctcctccaatca
agtaacctgtctctggtggactttggatactcctcagctgtcactcccaaggtcatggct
gggttccttagaggagacaaggtcatctcctacaatgcatgtgctgttcagatgttcttc
tttgtagccttggccacggtggaaaattacttgttggcctcaatggcctatgaccgctat
gcagcagtgtgcaaacccctacactacaccaccaccatgacggccagtgtagttatcttt
atctcctacttgttcatattcatcaccatcttgaagatgcattcagctaagggacaccaa
aaagcattgtccacctgtgcctctcacttcactgcagtctccgtcttctatgggacagta
atcttcatctacttgcagcccagctccagccactccatggacacagacaaaatggcatct
gtgttctatgctatgatcatccccatgctgaaccctgtggtctacagcctgaggaacaga
gaagtccagaatgcattcaagaaagtgttgagaaggcaaaaatttctataa

>gi568815587r:58407179_58608105|GENSCAN_predicted_peptide_3|314_aa
MENNTEVTEFILVGLTDDPELQIPLFIVFLFIYLITLVGNLGMIELILLDSCLHTPMYFF
LSNLSLVDFGYSSAVTPKVMVGFLTGDKFILYNACATQFFFFVAFITAESFLLASMAYDR
YAALCKPLHYTTTMTTNVCACLAIGSYICGFLNASIHTGNTFRLSFCRSNVVEHFFCDAP
PLLTLSCSDNYISEMVIFFVVGFNDLFSILVILISYLFIFITIMKMRSPEGRQKAFSTCA
SHLTAVSIFYGTGIFMYLRPNSSHFMGTDKMASVFYAIVIPMLNPLVYSLRNKEVKSAFK
KTVGKAKASIGFIF

>gi568815587r:58407179_58608105|GENSCAN_predicted_CDS_3|945_bp
atggagaacaacacagaggtgactgaattcatccttgtggggttaactgatgacccagaa
ctgcagatcccactcttcatagtcttccttttcatctacctcatcactctggttgggaac
ctggggatgattgaattgattctactggactcctgtctccacacccccatgtacttcttc
ctcagtaacctctccctggtggactttggttattcctcagctgtcactcccaaggtgatg
gtggggtttctcacaggagacaaattcatattatataatgcttgtgccacacaattcttc
ttctttgtagcctttatcactgcagaaagtttcctcctggcatcaatggcctatgaccgc
tatgcagcattgtgtaaacccctgcattacaccaccaccatgacaacaaatgtatgtgct
tgcctggccataggctcctacatctgtggtttcctgaatgcatccattcatactgggaac
actttcaggctctccttctgtagatccaatgtagttgaacactttttctgtgatgctcct
cctctcttgactctctcatgttcagacaactacatcagtgagatggttattttttttgtg
gtgggattcaatgacctcttttctatcctggtaatcttgatctcctacttatttatattt
atcaccatcatgaagatgcgctcacctgaaggacgccagaaggccttttctacttgtgct
tcccaccttactgcagtttccatcttttatgggacaggaatctttatgtacttacgacct
aactccagccatttcatgggcacagacaaaatggcatctgtgttctatgccatagtcatt
cccatgttgaatccactggtctacagcctgaggaacaaagaggttaagagtgcctttaaa
aagactgtagggaaggcaaaggcctctataggattcatattttaa

>gi568815587r:58407179_58608105|GENSCAN_predicted_peptide_4|128_aa
MDEAGNPHSQQTNTETENQTQHVLTPAAGAPQSLNTIIIRRLTYLSREKSNSWELGLISF
YQGNCEIVLILEEQKHQCVTSVRVKGYGDQVINGALAQFCLTVGPMGPQTHPVVISPVLE
CVVGIDSS

>gi568815587r:58407179_58608105|GENSCAN_predicted_CDS_4|387_bp
atggatgaagctggaaaccctcattctcagcaaactaacacagaaacagaaaaccaaaca
cagcatgttctcactccagcagctggagcacctcaaagcctgaacactataatcatcaga
aggctcacctacctgagtcgagaaaaatcaaacagctgggaactgggacttatttccttt
taccagggtaactgtgaaattgtactaattctggaagaacaaaaacatcagtgtgtcaca
tcagtcagagtaaagggttatggagatcaggtgatcaatggagctttagctcagttttgt
ctcacagtgggcccaatgggtccccaaacacatccagttgtcatttccccagttctggaa
tgcgtagttggaattgatagcagctag

>gi568815587r:58407179_58608105|GENSCAN_predicted_peptide_5|416_aa
MENSTEVTEFILLGLTDDPNLQIPLLLAFLFIYLITLLGNGGMMVIIHSDSHLHTPMYFF
LSNLSLVDLGYSSAVAPKTVAALRSGDKAISYDGCAAQFFFFVGFATVECYLLASMAYDR
HAAVCRPLHYTTTMTAGVCALLATGSYVSGFLNASIHAAGTFRLSFCGSNEINHFFCDIP
PLLALSCSDTRISKLVVFVAGFNVFFTLLVILISYFFICITIQRMHSAEGQKKVFSTCAS
HLTALSIFYGTIIFMYLQPNSSQSVDTDKIASVFYTVVIPMLNPLIYSLRNKEVKTMRPI
QQHTGRTAFTGQDPLHIGIFLIEIYRAQEYLHLEKSLGSSYPSTGCIPISDEFRDLMLFA
VPAEFILEGTDSRTRQQGGTFISQDLLKSFRTGLSCLWSVLCPTYTAQVKRRERNH

>gi568815587r:58407179_58608105|GENSCAN_predicted_CDS_5|1251_bp
atggagaatagcacagaagtgacagagtttatcctcttgggattaacagatgaccccaat
cttcagatacccctcctcctggcatttttattcatctacctcatcaccctgcttgggaat
gggggaatgatggtgatcatccactcagactcccatctccacactccaatgtactttttc
ctcagtaacctctcccttgtagacttgggttactcatcagctgtagcccccaaaacggtg
gctgcattgcggtcaggggacaaggccatctcctacgatggatgtgcagctcagttcttc
ttctttgtggggtttgccactgttgagtgctacctcctggcctccatggcctatgatcgc
catgcagcggtatgtaggcctcttcattacaccaccaccatgacagcaggtgtgtgtgcc
ctccttgctactggttcctatgtctctggcttcctcaatgcctctatccatgcagcaggc
accttcagactctccttctgtggttctaatgagattaatcatttcttctgtgacattccc
ccactcctggctctctcatgctctgacacacgcatcagcaagttggtggtctttgtggca
ggcttcaacgtctttttcaccctcctggtcatccttatttcttacttcttcatatgcatc
accattcagaggatgcattctgctgaagggcagaagaaagtcttctccacctgtgcttcc
catctcactgctttgtccatcttctatggcacaatcatcttcatgtacttacagcccaac
tccagccagtccgtggacacagacaaaatagcctctgtgttttacacagtggtgattccc
atgctgaatcccttgatatacagccttaggaacaaagaagtgaaaacaatgaggcctatt
cagcaacacacaggaagaacagcctttacaggccaggatccactgcatataggaatcttt
ctcattgaaatctacagagctcaagagtatctgcatttggagaagagcctgggaagcagc
tatccaagcactgggtgcattccaatctcagatgaatttcgtgaccttatgctctttgct
gtacctgcagaattcattttggagggcacagactctagaaccagacagcagggagggacc
ttcatatcccaggacctgctgaagtcattccgaacaggtttaagttgcctctggtctgtc
ctctgtcccacctacacagcacaagtaaaaaggagagagagaaaccactga

>gi568815587r:58407179_58608105|GENSCAN_predicted_peptide_6|131_aa
MGCRMDIVLPGMKTTFISLSISIKALSDQESEEAMDQLALQWEELIEARLTIGLVILLPE
NALRQLCQAESTHKVLRMELVPHGTDTTASDGLPTPMAERSPAVMVMELTEWTSIQFKEG
ASRKTGEAVLG

>gi568815587r:58407179_58608105|GENSCAN_predicted_CDS_6|396_bp
atgggctgcagaatggatattgtattaccaggcatgaaaaccacattcatctccttgtcc
atctccataaaagctttgagtgaccaggaatctgaagaggctatggatcagttggcatta
cagtgggaagagcttattgaagcaaggttgacaataggtcttgtcattctgctccctgaa
aatgcccttcgacaactgtgtcaggcagaaagcacacacaaagtgctcaggatggaactt
gtaccccatggcactgatacaacggccagtgatgggctgcccacacccatggcagagcgt
tccccggcggtgatggtaatggagctcacagaatggacgtccatccagttcaaagaagga
gccagtagaaaaactggtgaagcagtcctggggtag

>gi568815587r:58407179_58608105|GENSCAN_predicted_peptide_7|639_aa
XINTYHEQTLSESTLWKLLTIVKGYKSQVSTESRKRAIPETLTNTTGPIRVATSDTGSAS
KKQRKVTVLQEKVELLNKHRRLRACDVILESRLKERDRVTKGVRMPERGMSLRVSGRRWI
TSECRGVSKDDFGEWGNGPTSEAAAAAAAAARPRSRPPLSTRLLVVPAGAAATASGGRCW
GSSGAALAASPPSWSATAGGARARATDAQRANRKRGQASSPRPSQSYTQRRPRLLMATLQ
QFLQIVISPVTTLETWCGSFFLLAEKWHRGQVGSNALLEELERSTLQDSDEYSNPAPLPL
DQHSRKETNLDETSEILSIQDNTSPLPAQLVYTTNIQELNVYSEAQEPKESPPPSKTSAA
AQLDELMAHLTEMQAKVAVRADAGKKHLPDKQDHKASLDSMLGGLEQELQDLGIATVPKG
HCASCQKPIAGKVIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSPR
CAYCAAPILDKVLTAMNQTWHPEHFFCSHCGEVFGAEGVKLQTFAVSVTAHKGSADPKSE
QQQDLLQRVKEQNFYSVEGDPTAVSVANPLTAWGWRCWPATLSAGPADPVLPETRAGPRA
PHAAPVPARASPSTPPRRQRELAPASASPEWGSHSAAAG

>gi568815587r:58407179_58608105|GENSCAN_predicted_CDS_7|1920_bp
naaataaacacatatcatgaacaaacactgtcagaatcaactttgtggaaactcttaaca
atagttaaaggttataaaagccaagtgagcactgaatcaagaaaaagagcaatacctgaa
accttgactaacactacgggacccataagagttgccactagtgatactggaagtgcttcc
aagaagcagagaaaagtcacggtattacaagaaaaagttgaattgcttaataagcataga
aggttgagggcatgtgatgtaatactggagagccgcctaaaggaaagggatagggtgaca
aagggggtgcggatgccagaaagagggatgagcctgcgggtgtcagggaggaggtggatc
actagcgagtgcaggggtgtatcaaaagatgatttcggggagtggggaaacggcccgaca
agcgaagctgcggcggcggcggccgcagcggcccggcctcggtcccgacctcccctcagc
acgcggctgctagtggtccctgcaggcgccgccgcgaccgcctcagggggccgttgttgg
ggctcctccggagccgccttggccgcctctcccccttcctggtccgctaccgctggcggc
gcgcgcgcgcgcgccacagacgctcagcgggccaatcggaaaagaggacaagcctcctca
ccccgcccctcgcagtcttacacgcagcggcgccccaggctgttgatggctacacttcaa
cagtttcttcaaattgtcatcagcccagtaactacccttgagacttggtgtggatctttc
ttcctgctggcagagaaatggcatcgaggacaggttggctcaaatgccttattggaggaa
ctggaacgctccacccttcaggacagtgatgaatattccaacccagctcctcttcccctg
gatcagcattccagaaaggagactaaccttgatgagacttcggagatcctttctattcag
gataacacaagtcccttgccggcgcagctcgtgtatactaccaatatccaggagctcaat
gtctacagtgaagcccaagagccaaaggaatcaccaccaccttctaaaacgtcagcagct
gctcagttggatgagctcatggctcacctgactgagatgcaggccaaggttgcagtgaga
gcagatgctggcaagaagcacttaccagacaagcaggatcacaaggcctccctggactca
atgcttgggggtctggagcaggaattgcaggaccttggcattgccacagtgcccaagggc
cattgtgcatcctgccagaaaccgattgctgggaaggtgatccatgctctagggcaatca
tggcatcctgagcattttgtctgtactcattgcaaagaagagattggctccagtcccttc
tttgagcggagtggcttggcctactgccccaacgactaccaccaacttttttctccacgc
tgtgcttactgcgctgctcccatcctggataaagtgctgacagcaatgaaccagacctgg
cacccagagcacttcttctgctctcactgcggagaggtgtttggtgcagaaggagtgaag
ctgcagaccttcgcggtgagtgttacagctcataaaggcagtgcggacccaaagagtgag
cagcagcaagatttattgcaaagagtgaaagaacaaaacttctacagtgtggaaggggac
ccaactgctgtctcagttgctaatcctctcactgcctggggctggcggtgctggccggcc
actctgagtgcggggcctgctgatcccgtgctacccgaaactcgtgctggcccacgagca
ccgcatgcagccccagttcctgcccgtgcctctccgtccacacctccccgcaggcagagg
gagctggctccagcctcagccagcccagagtggggctcccacagtgcagcggcaggctga