GENSCAN 1.0	Date run:  8-Nov-116	Time: 08:37:18

Sequence gi568815587r:58302468_58503409 : 200942 bp : 36.49% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    187    182    6                               1.05
 1.01 Sngl -   3506   2919  588  2  0   10   44   290 0.719  12.73
 1.00 Prom -   3754   3715   40                              -9.65

 2.02 PlyA -   3855   3850    6                               1.05
 2.01 Sngl -   5280   3976 1305  0  0   49   48   536 0.629  41.47
 2.00 Prom -   5670   5631   40                              -4.75

 3.05 PlyA -   5908   5903    6                               1.05
 3.04 Term -   6725   6574  152  0  2   54   43   209 0.994  10.09
 3.03 Intr -   7863   7705  159  1  0   23   42   145 0.177   2.44
 3.02 Intr -   8721   8615  107  2  2   64   29   134 0.206   4.04
 3.01 Init -  22793  22693  101  2  2   26   97    78 0.448   2.28
 3.00 Prom -  24034  23995   40                              -2.55

 4.03 PlyA -  24155  24150    6                               1.05
 4.02 Term -  46729  46422  308  2  2   88   34   122 0.169   1.09
 4.01 Init -  52032  51702  331  0  1   68   63   235 0.520  16.55
 4.00 Prom -  54488  54449   40                              -6.25

 5.03 PlyA -  54633  54628    6                               1.05
 5.02 Term -  56630  55658  973  1  1   79   39   379 0.805  22.63
 5.01 Init -  58090  57909  182  1  2   60   93   101 0.779   6.50
 5.00 Prom -  61185  61146   40                              -3.65

 6.00 Prom +  61917  61956   40                              -3.75
 6.01 Sngl +  68508  69389  882  2  0   42   43   378 0.980  24.47
 6.02 PlyA +  70758  70763    6                               1.05

 7.00 Prom +  71568  71607   40                              -3.85
 7.01 Init +  88455  88638  184  2  1   69   40   152 0.055   5.84
 7.02 Term +  97292  97575  284  0  2   66   43   155 0.151   3.40
 7.03 PlyA +  98301  98306    6                               1.05

 8.07 PlyA -  98731  98726    6                               1.05
 8.06 Term - 100206  99998  209  1  2   79   38    96 0.116   0.22
 8.05 Intr - 100757 100444  314  1  2   56   84   211 0.043  12.40
 8.04 Intr - 106813 106677  137  1  2   92   14   116 0.009   3.05
 8.03 Intr - 120609 120384  226  2  1   72   34   209 0.137  10.96
 8.02 Intr - 125639 125552   88  0  1   85  116    12 0.647   1.81
 8.01 Init - 125988 125835  154  0  1   94   49   112 0.748   8.09
 8.00 Prom - 130856 130817   40                              -5.55

 9.02 PlyA - 132928 132923    6                               1.05
 9.01 Sngl - 137684 136740  945  2  0   52   32   311 0.970  18.19
 9.00 Prom - 151146 151107   40                              -3.65

10.00 Prom + 155221 155260   40                              -5.05
10.01 Init + 155404 155479   76  0  1   83   99    54 0.723   7.30
10.02 Intr + 164059 164147   89  2  2   53   40    53 0.032  -4.23
10.03 Term + 181303 181524  222  0  0   91   43   165 0.710   8.23
10.04 PlyA + 182420 182425    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:58302468_58503409|GENSCAN_predicted_peptide_1|195_aa
MCKNRKHSYTPITDKQKLPFTIASKGIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTKKW
KNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTEMEKTTLTFIWNQKRARIAKS
ILSQKNKAGGITLPDFKLYYKATVTKTSWYWYQNRDIDQWNRTKPSEIIPHIYNYLIFDK
TDKNKQWGKVSLFNK

>gi568815587r:58302468_58503409|GENSCAN_predicted_CDS_1|588_bp
atgtgcaaaaatcgcaagcattcttatacaccaataacagacaaacagaaactcccattc
acaattgcttcaaagggaataaaatacctaggaatccaacttacaagggatgtgaaggac
ctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaagaaatgg
aagaacattccatgctcatgggtaggaagaatcaatattgtgaaaatggctatactgccc
aaggtcatttatagattcaatgccatccccatcaagctaccaatgactttcttcacagaa
atggaaaaaactactttaacgttcatatggaaccaaaaaagagcccgcattgccaagtca
atcctaagccaaaagaacaaagctggcggcatcacactaccggacttcaaactatactac
aaggctacagtaaccaaaacatcatggtactggtaccaaaacagagatatagaccaatgg
aacagaacaaagccctcagaaataattccgcatatctacaactatctgatctttgataaa
actgacaaaaacaagcaatggggaaaggtttccctgtttaataaatga

>gi568815587r:58302468_58503409|GENSCAN_predicted_peptide_2|434_aa
MGDFNTPLSTLDRSTRQKVNKDIQELNSALHQVDLIDIYRTLHPKSTEYTFSLAAHHTYS
KIEHIVGSKALLSKSKRTEVVTNCLSDHSAIKLELRIKKHTQNHSTTRKLNNLLLNDYWV
HNKMKAEIKMFFETNENRDTTYQNLWDTFKAVCTGKFMALTAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIETKNTFQKISESRSWFFEKINKIDRPLAGLIK
KKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLN
QEEVESLNRPITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEELVPLLLKLFQSIEKE
GILPNSFYEARIILIPKPGRDTTKKENFRPISLINIDAKILNKILANQIQQHIKKLTHHD
QVGFIPGMQGWFNI

>gi568815587r:58302468_58503409|GENSCAN_predicted_CDS_2|1305_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagttaac
aaggatatccaggaattgaactcagctctgcaccaagtggacctaatagacatctacaga
actctccaccccaaatcaacagaatatacattctccttagcagcacaccacacttattcc
aaaattgagcacatagttggaagtaaagctctcctcagcaaatctaaaagaacagaagtt
gtaacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaacac
actcaaaaccactcaactacacggaaactgaacaacctgctcctgaatgactactgggta
cataacaaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacagagacaca
acatatcagaatctctgggacacattcaaggcagtgtgtacagggaaatttatggcacta
actgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaag
atcagagcagaactgaaggaaatagagacaaaaaacacctttcaaaaaatcagtgaatcc
aggagctggttttttgaaaagatcaacaaaattgatagaccgctagcaggactaataaag
aagaaaagagagaagaatcaaatagacacaataaaaaatgacaaaggggacattaccact
gatcccacagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaa
ctagaaaatctagaagaaatggatacattcctcgacacatacaccctcccaagactaaac
caggaagaagttgaatctctgaatagaccaataacaggctctgaaattgaggcaataatt
aatagcttaccaaccaaaaaaagtccaggaccagatggattcacagccgaattctatcag
aggtacaaagaggagctggtaccattacttctgaaactattccaatcaatagaaaaagag
ggaatcctccctaactcattttatgaggccagaatcatcctgataccaaagcctggcaga
gacacaaccaaaaaagagaattttagaccaatatccttgataaacattgatgcaaaaatc
ctcaataaaatactggcaaaccaaatccagcagcacatcaaaaagcttactcaccatgat
caagtgggcttcatccctgggatgcaaggctggttcaacatatga

>gi568815587r:58302468_58503409|GENSCAN_predicted_peptide_3|172_aa
MPTLKRNKSKIIKLILRHEKLEKEEKAKPKASKRRKTSVSAAASVNATILISKVQGPWRV
LGQERDLLPCKTLAFNEKYVALAAAQEFGHTWYLSQVNDRMTAEKRDKFPTGQQAIPVWI
LTECSSSPAMEQSWTENDFDELREEGFRRSNYSKLKEEVRMHGKEVETLKKN

>gi568815587r:58302468_58503409|GENSCAN_predicted_CDS_3|519_bp
atgcctacattaaaaagaaataagtctaaaatcattaaactaattttgcgccatgagaaa
ctagaaaaagaagagaaagctaaacccaaagctagcaaaaggaggaaaactagtgtttct
gctgctgcatcggtgaacgcaactattctgatcagcaaggtccagggaccgtggcgggtt
cttggacaagagagggatctgctgccatgtaaaaccctggcctttaatgaaaagtatgtg
gctttagctgcagcccaagagtttggacatacctggtatcttagtcaagtaaatgataga
atgacagctgaaaaaagggacaaattccctactggtcagcaagccatcccagtatggatc
ctcactgaatgcagctcctcaccagcaatggaacaaagctggacagagaacgactttgac
gagttgagagaagaaggcttcagacgatcaaactactccaagctaaaggaggaagttcga
atgcatggcaaagaagttgaaaccttgaaaaaaaattag

>gi568815587r:58302468_58503409|GENSCAN_predicted_peptide_4|212_aa
MDENCFVLSLYSHKGLIISGANTDVVVWDPEGTKIISASTLVQGGNFNLNENMCYYRMPL
LTIDPGGAVYENGIFMCTEGTGQTVSCGLSQLNHRKNTLNIKGVTVLPTWVILTSYLFIF
ITILKMHSAQGHLKALSTCASHLIAVSIFYGTTIFMHLQPSSSHSMDTDEMASLFYAVFI
SMLNLVFYSLRSKEVKNAFKKAVEKAKFFLEL

>gi568815587r:58302468_58503409|GENSCAN_predicted_CDS_4|639_bp
atggatgagaactgttttgttctcagcctgtattcccacaagggcctcatcatctctgga
gccaatactgatgtggtggtgtgggaccctgaaggcacaaagatcatctcagccagcacc
ttggtgcagggaggaaatttcaatctcaatgagaacatgtgctactaccgcatgcctctg
ctcaccatcgaccctgggggtgctgtgtatgagaatggcatcttcatgtgcactgagggc
actggacaaactgtctcctgtggtctttctcagctgaaccacagaaagaacaccttaaac
attaagggagtgactgtactccctacctgggttatcttgacctcctacctgttcatattc
atcaccatcttgaagatgcactcagctcagggacacttaaaagctttgtccacctgtgcc
tctcacctcattgcagtctccatcttctatggaactactatctttatgcacttacagcct
agctccagccattccatggacacagatgaaatggcatccttgttctatgctgtgttcatc
tccatgctgaaccttgtgttctacagcctgaggagcaaagaagtcaagaatgcattcaaa
aaggcggttgagaaggcaaaatttttcttagaactgtga

>gi568815587r:58302468_58503409|GENSCAN_predicted_peptide_5|384_aa
MNVLLTDSNSNKKIVHKHICSLQSAPKTTNLQPSISDILLSVESNDRKNVSKIKGDCFNT
RVSCDSKITSMENNTEVSEFILLGLTNAPELQVPLFIMFTLIYLITLTGNLGMIILILLD
SHLHTPMYFFLSNLSLAGIGYSSAVTPKVLTGLLIEDKAISYSACAAQMFFCAVFATVEN
YLLSSMAYDRYAAVCNPLHYTTTMTTRVCACLAIGCYVIGFLNASIQIGDTFRLSFCMSN
VIHHFFCDKPAVITLTCSEKHISELILVLISSFNVFFALLVTLISYLFILITILKRHTGK
GYQKPLSTCGSHLIAIFLFYITVIIMYIRPSSSHSMDTDKIASVFYTMIIPMLSPIVYTL
RNKDVKNAFMKVVEKAKYSLDSVF

>gi568815587r:58302468_58503409|GENSCAN_predicted_CDS_5|1155_bp
atgaatgtccttctgacagattcaaattcaaataaaaagattgtgcataaacacatctgc
agcctacagtcagcccccaagactacgaacctccaaccctcaatatctgatatcctgcta
agtgttgagagtaatgacaggaagaatgtgtctaagataaaaggggattgtttcaacaca
agagtatcttgtgattctaaaataacatccatggagaataatacagaggtgagtgaattc
atcctgcttggtctaaccaatgccccagaactacaggttcccctctttatcatgtttacc
ctcatctacctcatcactctgactgggaacctggggatgatcatattaatcctgctggac
tctcatctccacactcccatgtacttttttctcagtaacctgtctcttgcaggcattggt
tactcctcagctgtcactccaaaggttttaactgggttgcttatagaagacaaagccatc
tcctacagtgcctgtgctgctcagatgttcttttgtgcagtctttgccactgtggaaaat
tacctcttgtcctcaatggcctatgaccgctacgcagcagtgtgtaaccccctacattat
accaccaccatgacaacacgtgtgtgtgcttgtctggctataggctgttatgtcattggt
tttctgaatgcttctatccaaattggagatacatttcgcctctctttctgcatgtccaat
gtgattcatcactttttctgtgacaaaccagcagtcattactctgacctgctctgagaaa
cacattagtgagttgattcttgttcttatatcaagttttaatgtcttttttgcacttctt
gttaccttgatttcctatctgttcatattgatcaccattcttaagaggcacacaggtaag
ggataccagaagcctttatctacctgtggttctcacctcattgccattttcttattttat
ataactgtcatcatcatgtacatacgaccaagttccagtcattccatggacacagacaaa
attgcatctgtgttctacactatgatcatccccatgctcagtcctatagtctataccctg
aggaacaaagacgtgaagaatgcattcatgaaggttgttgagaaggcaaaatattctcta
gattcagtcttttaa

>gi568815587r:58302468_58503409|GENSCAN_predicted_peptide_6|293_aa
MIISIDAEKAFDKIQQRFMLKTRNKLGIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFAGDMIVYLENPIIS
AQILLKLMSNFSKVSAYKINVQKSQAFLYINNRQTESQIMSELPFTIASKRIKYLGIQLT
RDVKELFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPR
TFFTELEKTTLKFIWNQKRACIAKSILSQKNKAGGITLPDFKLYYKATVTKTA

>gi568815587r:58302468_58503409|GENSCAN_predicted_CDS_6|882_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaacgcttcatgcta
aaaactcgcaataaattaggtattgatgggacgtatttcaaaataataagagctatctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcaggtgacatgattgtatatctagaaaaccccatcatctca
gcccaaattctccttaagctgatgagcaacttcagcaaagtctcagcatacaaaatcaat
gtacaaaaatcacaagcattcttatacatcaacaacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaataaaatatctaggaatccaacttaca
agggacgtgaaggaactcttcaaggagaactacaaaccactgctcaaggaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaa
atggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaagg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
tgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatga

>gi568815587r:58302468_58503409|GENSCAN_predicted_peptide_7|155_aa
MCSSSSLLCLSLHTSLQAEGAGSGLDQPRKGLPQCSGRLKGSSSTARVGTKAEEVPRASK
GCKSRLTEYWLFGFVLMWPQALKGFAYYWGSVGESVMAFVSSPSGNHQNVLTFGTKEASV
YTDYQFVPRLFTGSSKNRIEKGALYVAEDLFFCIP

>gi568815587r:58302468_58503409|GENSCAN_predicted_CDS_7|468_bp
atgtgcagctccagttccctcctgtgcctctccctccacacctccctgcaagctgaggga
gccggctctggcctcgaccagcccaggaaggggctcccacagtgcagcggccggctgaag
ggctcctcaagcacggccagagtgggcaccaaggccgaggaggtgccgagagcgagcaag
ggctgtaagtcacgcttaactgagtactggctgtttggctttgtgctcatgtggccccag
gccctgaagggctttgcatattattggggctctgtaggtgaatcagttatggcctttgtc
tcaagtccaagtgggaatcaccagaatgtcttaacttttggcacaaaagaggcttcagtt
tatacagactatcagtttgtaccccgactattcacaggatccagcaagaataggatagag
aaaggtgccttatatgtggctgaagacttatttttctgtattccttga

>gi568815587r:58302468_58503409|GENSCAN_predicted_peptide_8|375_aa
MACTSAGPYKVQRAILRPLKKRSSNKQSNCCYANDPMRERVHPRLHGLSRGSGFPIPLST
AEAHAILASPFWPCGFLLQSSNLSLVDFGYSSAVTPKVMAGFLRGDKVISYNACAVQMFF
FVALATVENYLLASMAYDRYAAVCKPLHYTTTMTASVVWLSEKLYVVTQRHLLMKVSSSV
SAPAGTLSLLIIIAGDEISGEYNLSLVDFCYSSAVTPIVMAGFLIEDKVISYNACAAQMY
IFVAFATVENYLLASMAYDRYAAVCKPLHYTTTMTTTVCARLAIGSYLCGFLNASIHTGD
TFSLSFFGIFYGTIIFMYLQPSSSHSMDTDKMAPVFYTMVIPMLNPLVYSLRNKEVKSAF
KKVVEKAKLSVGWSV

>gi568815587r:58302468_58503409|GENSCAN_predicted_CDS_8|1128_bp
atggcatgtacaagtgctggcccttacaaggttcagagagcaatcctcagacctctgaag
aaacgctccagcaataagcagagcaactgctgctatgccaatgaccccatgagggaaaga
gtacatcctaggctccatggcctatcaaggggtagtggattcccaattccattgtccaca
gctgaagcccatgctattcttgcctctccattctggccatgtggattcctcctccaatca
agtaacctgtctctggtggactttggatactcctcagctgtcactcccaaggtcatggct
gggttccttagaggagacaaggtcatctcctacaatgcatgtgctgttcagatgttcttc
tttgtagccttggccacggtggaaaattacttgttggcctcaatggcctatgaccgctat
gcagcagtgtgcaaacccctacactacaccaccaccatgacggccagtgttgtctggcta
agtgaaaagctgtatgtggtcactcaaagacacctgctgatgaaggtatcatcatctgtt
tctgcacctgctggaacattaagccttttgattatcatagcaggagatgagataagtgga
gagtataacttgtctctagtggacttttgctactcttcagctgtcactcccatcgtcatg
gctggattccttatagaagacaaggtcatctcttacaatgcatgtgctgctcaaatgtat
atctttgtagcttttgccactgtggaaaattacctcttggcctcaatggcctatgaccgc
tatgcagcagtgtgcaaacccctacattacaccacaaccatgacaacaactgtgtgtgct
cgtctggccataggctcctacctctgtggtttcctgaatgcctccatccacactggggac
acatttagtctctctttcttcggcatcttctatgggactattatcttcatgtacttacaa
cccagctccagtcactccatggacacagacaaaatggcacctgtgttctatacaatggtc
atccccatgctgaaccctctggtctatagtctgaggaacaaggaagtgaagagtgcattc
aagaaagttgttgagaaggcaaaattgtctgtaggatggtcagtttaa

>gi568815587r:58302468_58503409|GENSCAN_predicted_peptide_9|314_aa
MENNTEVTEFILVGLTDDPELQIPLFIVFLFIYLITLVGNLGMIELILLDSCLHTPMYFF
LSNLSLVDFGYSSAVTPKVMVGFLTGDKFILYNACATQFFFFVAFITAESFLLASMAYDR
YAALCKPLHYTTTMTTNVCACLAIGSYICGFLNASIHTGNTFRLSFCRSNVVEHFFCDAP
PLLTLSCSDNYISEMVIFFVVGFNDLFSILVILISYLFIFITIMKMRSPEGRQKAFSTCA
SHLTAVSIFYGTGIFMYLRPNSSHFMGTDKMASVFYAIVIPMLNPLVYSLRNKEVKSAFK
KTVGKAKASIGFIF

>gi568815587r:58302468_58503409|GENSCAN_predicted_CDS_9|945_bp
atggagaacaacacagaggtgactgaattcatccttgtggggttaactgatgacccagaa
ctgcagatcccactcttcatagtcttccttttcatctacctcatcactctggttgggaac
ctggggatgattgaattgattctactggactcctgtctccacacccccatgtacttcttc
ctcagtaacctctccctggtggactttggttattcctcagctgtcactcccaaggtgatg
gtggggtttctcacaggagacaaattcatattatataatgcttgtgccacacaattcttc
ttctttgtagcctttatcactgcagaaagtttcctcctggcatcaatggcctatgaccgc
tatgcagcattgtgtaaacccctgcattacaccaccaccatgacaacaaatgtatgtgct
tgcctggccataggctcctacatctgtggtttcctgaatgcatccattcatactgggaac
actttcaggctctccttctgtagatccaatgtagttgaacactttttctgtgatgctcct
cctctcttgactctctcatgttcagacaactacatcagtgagatggttattttttttgtg
gtgggattcaatgacctcttttctatcctggtaatcttgatctcctacttatttatattt
atcaccatcatgaagatgcgctcacctgaaggacgccagaaggccttttctacttgtgct
tcccaccttactgcagtttccatcttttatgggacaggaatctttatgtacttacgacct
aactccagccatttcatgggcacagacaaaatggcatctgtgttctatgccatagtcatt
cccatgttgaatccactggtctacagcctgaggaacaaagaggttaagagtgcctttaaa
aagactgtagggaaggcaaaggcctctataggattcatattttaa

>gi568815587r:58302468_58503409|GENSCAN_predicted_peptide_10|128_aa
MDEAGNPHSQQTNTETENQTQHVLTPAAGAPQSLNTIIIRRLTYLSREKSNSWELGLISF
YQGNCEIVLILEEQKHQCVTSVRVKGYGDQVINGALAQFCLTVGPMGPQTHPVVISPVLE
CVVGIDSS

>gi568815587r:58302468_58503409|GENSCAN_predicted_CDS_10|387_bp
atggatgaagctggaaaccctcattctcagcaaactaacacagaaacagaaaaccaaaca
cagcatgttctcactccagcagctggagcacctcaaagcctgaacactataatcatcaga
aggctcacctacctgagtcgagaaaaatcaaacagctgggaactgggacttatttccttt
taccagggtaactgtgaaattgtactaattctggaagaacaaaaacatcagtgtgtcaca
tcagtcagagtaaagggttatggagatcaggtgatcaatggagctttagctcagttttgt
ctcacagtgggcccaatgggtccccaaacacatccagttgtcatttccccagttctggaa
tgcgtagttggaattgatagcagctag