GENSCAN 1.0	Date run:  6-Nov-116	Time: 03:17:16

Sequence gi568815587f:9284764_9545191 : 260428 bp : 43.11% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   2791   2786    6                               1.05
 1.03 Term -  10624  10480  145  0  1   77   48    65 0.122  -1.22
 1.02 Intr -  26811  26657  155  0  2  105   76    82 0.296   7.57
 1.01 Init -  29678  29373  306  2  0  118   41    87 0.354   2.44
 1.00 Prom -  38151  38112   40                              -7.76

 2.00 Prom +  41952  41991   40                              -2.26
 2.01 Init +  78209  78314  106  1  1   32   59    93 0.288   1.18
 2.02 Intr +  94333  94499  167  2  2  100   82   118 0.875  12.08
 2.03 Intr +  99965 100084  120  1  0   -7   72   166 0.298   6.19
 2.04 Intr + 109451 109521   71  1  2   63   87   -25 0.022  -7.12
 2.05 Intr + 110008 110030   23  1  2  110   94    23 0.058   2.29
 2.06 Intr + 123723 123876  154  1  1   66   91    89 0.269   6.13
 2.07 Intr + 125165 125323  159  2  0   86   80    48 0.223   2.90
 2.08 Intr + 129492 129648  157  0  1   26   90   128 0.128   6.81
 2.09 Intr + 135648 135742   95  2  2   24   84    36 0.721  -4.44
 2.10 Intr + 135851 135935   85  2  1   29  108   104 0.795   6.32
 2.11 Intr + 140383 140499  117  0  0  104   61    49 0.703   4.46
 2.12 Intr + 143777 143866   90  1  0   71   75    29 0.415   0.09
 2.13 Intr + 144268 144433  166  0  1   23   98   118 0.684   5.83
 2.14 Intr + 144911 145071  161  0  2  102   76    72 0.998   7.11
 2.15 Intr + 146112 146240  129  2  0   57   94    97 0.995   8.09
 2.16 Intr + 148807 148873   67  0  1  131   35     3 0.863  -2.22
 2.17 Intr + 148958 149083  126  0  0   66  109    60 0.899   6.55
 2.18 Intr + 153127 153211   85  2  1   43   98    -6 0.186  -5.22
 2.19 Intr + 153317 153522  206  2  2  112  107   192 0.904  22.34
 2.20 Intr + 155692 155898  207  2  0   22  106   330 0.999  27.25
 2.21 Intr + 157318 157434  117  2  0   79   80    51 0.917   3.84
 2.22 Intr + 175113 175227  115  1  1   50   94    74 0.001   3.71
 2.23 Intr + 179088 179107   20  0  2   48  121    10 0.000  -3.45
 2.24 Intr + 189178 189261   84  2  0   71   86    43 0.807   2.19
 2.25 Intr + 193627 193823  197  2  2   95   75   194 0.998  17.93
 2.26 Intr + 194709 194783   75  2  0   80   91    67 0.964   5.91
 2.27 Intr + 209883 210002  120  2  0   67   71    78 0.710   4.69
 2.28 Intr + 211540 211615   76  0  1   34   98    19 0.615  -3.41
 2.29 Intr + 212912 213037  126  0  0   81   79    41 0.735   3.15
 2.30 Intr + 223856 224083  228  0  0   65   94   250 0.913  21.14
 2.31 Intr + 227685 227833  149  1  2   79  103    63 0.945   6.85
 2.32 Intr + 231438 231599  162  2  0   67   91   116 0.851   9.97
 2.33 Intr + 240477 240623  147  2  0   55  109    22 0.098   1.43
 2.34 Term + 242767 242850   84  0  0   87   36    59 0.244  -1.75
 2.35 PlyA + 242869 242874    6                               1.05

 3.02 PlyA - 242997 242992    6                               1.05
 3.01 Sngl - 257507 256797  711  2  0   79   37   282 0.854  18.43
 3.00 Prom - 257664 257625   40                             -11.14

 4.02 PlyA - 257765 257760    6                               1.05
 4.01 Sngl - 259190 257790 1401  2  0   44   42   496 0.907  36.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 129532 129648  117  0  0   85   90    83 0.826   8.40
S.002 Init + 173108 173170   63  1  0   95   64    71 0.873   4.55


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:9284764_9545191|GENSCAN_predicted_peptide_1|201_aa
MAKGRVAERSQLGAHHTTPVGDGAAGTRGLAAPGSRDHQKGEWARGAELGVARGFCVSGG
EKDPRYSRRVAGKEGGLLAPRREQRPWGSWAWALAQHKAGRRAPVLLPQELRKAIQLSPQ
VGPLILCHSQGIQDANPRVPTLLHTHRLLLECLLEERVNMKVPRDMDDAKALGKVLSKYK
DTFYVQVLVAYFATYILYPFN

>gi568815587f:9284764_9545191|GENSCAN_predicted_CDS_1|606_bp
atggcgaaaggcagagtcgccgaacgatcgcagttgggcgctcaccacacgacccccgtg
ggggacggggcagcggggacgcggggtctcgcggcgcctggcagcagagaccaccagaag
ggtgagtgggcccggggagcagagctgggggtggcccgaggcttctgtgtgtcgggtggg
gaaaaggacccccgctattctcggagagtcgcggggaaagaggggggcctgctggcgccg
cggcgggagcagagaccgtgggggagttgggcttgggcgctcgcgcagcacaaggccgga
cgccgagcccctgtcctcctcccccaggagctccgcaaggcaattcagctttccccccag
gttggccccctcatcctgtgccacagccagggtatccaggatgccaatcctcgggtccct
accctcctccatacccaccgtctgctcctggaatgcctcctagaagaaagagtgaatatg
aaggttcccagagatatggatgatgccaaggctctaggaaaagttttatccaaatacaag
gacaccttttatgttcaagtacttgtagcttattttgctacatatattttgtatcctttt
aactga

>gi568815587f:9284764_9545191|GENSCAN_predicted_peptide_2|1396_aa
MFQAFCNSNRAEHNDAFENLQQQGHSAIYNIYQSAETPETVAGRHTSGCTSRGTHQQMNT
QAAGRQEEHIGEGTHRWLDIKRVALTGTGMPHPSPGFDRVRAAMDPNTIIEALRGTMDPA
LREAAERQLNESEGKAISDYSVSEWNASKGAGIRFVWRIVSTSVIYLKNMITQYWPDRET
APGDISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIKHDYPSRWTAIVDKI
GFYLQSDNSACWLGILLCLYQLVKNYEYKKPEERSPLVAAMQHFLPVLKDRFIQLLSDQS
DQSVLIQKQIFKIFYALVQETLQVEEDDRPELPWWKCKKWALHILARLFERYGSPGNVSK
EYNEFAEVFLKAFAVGVQQVLQKTMGFCYQILTEPNADPRKKDGALHMIGSLAEILLKKK
IYKDQMEYMLQNHVFPLFSSELGYMRARACWVLHYFCEVKFKSDQNLQTALELTRRCLID
DREMPVKVEAAIALQVLISNQEKAKEYITPFIRPVMQALLHIIRETENDDLTNVIQKMIC
EYSEEVTPIAVEMTQHLAMTFNQVIQTGPDEEGSDDKAVTAMGILNTIDTLLSVVEDHKE
ITQQLEGICLQVIGTVLQQHVLEFYEEIFSLAHSLTCQQVSPQMWQLLPLVFEVFQQDGF
DYFTENLRFPNNVEPVTNHFITQWLNDVDCFLGLHDRKMCVLGLCALIDMEQIPQVLNQV
SGQILPAFILLFNGLKRAYACHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLE
ILAKQAGEDGDDEDWEEDDAEETALEGYSTIIDDEDNPVDEYQIFKAIFQTIQNRNPVWY
QALTHGLNEEQRKQLQDIATLADQRRAAHAQFYPLADLRNFESNTPTSSLVGLVRQRKFV
LSTFGTDYIVPFLEDAKLIDGQVIQLEDGSAAYVQHVPIPKSNSYDQSALQAVQLEDGTT
AYIHHAVQVPQSDTILAIQADGTVAGLHTGDATIDPDTISALEQYAAKVSIDGSESVAGT
GMIGENEQEKKMQIVLQGHATRVTAKSQQSGEKAFRCEYDGCGKLYTTAHHLKVHERSHT
GDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPYRCSEDNCTKSFKTSGDLQKHIRTHT
GEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGKTYKQISTLAMHKRTAHND
TEPIEEEQEAFFEPPPGQGEDVLKGSQITYVTGVEGDDVVSTQVATVTQSGLSQQVTLIS
QDGTQHVNISQADMQAIGNTITMVTQDGTPITVPAHDAVISSAGTHSVAMVTAEGTEGEQ
VAIVAQDLAAFHTASSEMGHQQHSHHLVTTETRPLTLVATSNGTQIAVQLGEQPSLEEAI
RIASRIQQGETPGLDD

>gi568815587f:9284764_9545191|GENSCAN_predicted_CDS_2|4191_bp
atgtttcaagccttctgtaacagcaacagagcagagcacaatgatgccttcgaaaacctg
cagcaacaaggacactctgctatatacaatatctatcagagtgctgaaacccctgagact
gtagcaggcagacacacaagcggctgtacatcaagaggaacacatcagcagatgaataca
caggcagctggacgtcaagaggagcacatcggtgaaggaacacacaggtggctggacatc
aagagggtcgcgctaacaggcactggcatgccgcacccgagccccgggtttgaccgagtc
cgcgctgcgatggaccccaacaccattatcgaggccctgcggggcactatggacccagcc
ctgcgtgaggccgcggagcgccagctcaatgaatcagaggggaaagcaatttctgattac
agtgttagtgagtggaatgctagtaagggggcagggataagatttgtctggcgcattgtc
agtactagtgttatctatctgaaaaatatgataacacagtattggcctgatcgagaaaca
gcaccaggggatatatccccttatactattccagaagaagatcgccattgtattcgagaa
aatattgtagaagccattatccattctcctgagctcatcagggtacagcttactacatgc
attcatcacatcatcaaacatgattatccaagccgctggactgccattgtggacaaaatt
ggcttttatcttcagtccgataacagtgcttgttggctaggaattcttctttgcctttat
cagcttgtgaaaaattatgagtataaaaaaccagaggagcggagtccattggtagcagca
atgcagcattttctgccagttctaaaggatcgttttatccagcttctttctgaccagtct
gatcagtctgtcctcatccagaaacagatattcaagatcttctatgctcttgttcaggaa
acacttcaagttgaagaagatgatcgacctgagttaccatggtggaaatgcaagaagtgg
gccttacatattttagcaagactttttgaaagatatggaagccctggcaatgtttccaag
gagtataatgaatttgctgaagtatttctgaaggcatttgctgttggtgtccagcaagta
ctgcaaaagactatgggattttgttaccagattcttacagaaccaaatgctgaccctcga
aaaaaagatggagccctgcatatgattggctctttagctgaaatacttctgaagaaaaag
atctataaagatcagatggaatacatgttgcagaatcatgtattccctctcttcagcagt
gaactaggctacatgagagcaagggcttgctgggtacttcactatttttgtgaagtgaag
ttcaaaagtgatcagaaccttcaaacagccttagagctaacaagaagatgtctgattgat
gatagagaaatgcctgtgaaagtggaagctgccattgcccttcaagtattgatcagcaat
caagaaaaagctaaagaatatatcacaccattcatcagacctgtaatgcaggctcttctt
cacattataagagaaacagaaaatgatgaccttaccaatgtaattcagaaaatgatctgt
gaatatagtgaagaagttactcctattgcagtagaaatgacacaacatttggcaatgaca
tttaaccaagtaatccagacggggccagatgaagaaggtagtgatgacaaagcagttact
gctatgggaattctgaatacaattgatacacttcttagtgtagttgaagatcataaagag
ataacccaacagcttgagggaatctgcttacaggtcattggtactgttttacaacagcat
gtcttagaattctatgaggagatcttctctttagcgcacagtttgacatgtcaacaagtg
tctccacagatgtggcagctactaccccttgtatttgaagtctttcagcaagatggcttt
gattactttacagaaaatcttcgcttccctaataatgttgaaccagttacaaatcatttt
attacacagtggcttaatgatgttgactgtttcttggggcttcatgacagaaagatgtgt
gttctcggactctgtgctcttattgatatggaacagataccccaagttttaaatcaggtt
tctggacagattttgccggcttttatccttttatttaacggattgaaaagagcatatgcc
tgccatgcagaacatgagaatgacagtgatgatgatgatgaagctgaagatgatgatgaa
accgaggaactggggagtgatgaagatgatattgatgaagatgggcaagaatatttggag
attctggctaagcaggctggtgaagatggagatgatgaagattgggaagaagatgatgct
gaagagactgctctggaaggctattccacaatcattgatgatgaagataaccctgttgat
gagtatcagatatttaaagctatctttcaaactattcaaaatcgtaatcctgtgtggtat
caggcactgactcacggtcttaatgaagaacaaagaaaacagttacaggacatagcaact
ctggctgatcaaagaagagcagcccatgctcaattctaccccctggccgacttaagaaat
tttgagtctaatacacccacctcatctttagtcggcctggtgcgccaacgcaaatttgta
ctgagtaccttcggaactgactacatagttccatttctggaagatgcaaaactcatagat
ggccaggtcattcagttggaagatggttctgcggcctatgttcaacatgtacccatacct
aaaagtaatagttatgaccagagtgcattacaggcggttcagctggaagatggtaccaca
gcttatatccaccatgcagtgcaagtcccgcagtctgacaccatcttggcaattcaggct
gatgggacagtggcaggtctgcacactggggatgctacaattgaccctgacaccatcagt
gctttggaacagtatgcagcaaaggtgtccattgatggaagtgaaagtgtagcaggtact
ggaatgattggagaaaatgagcaagagaaaaaaatgcagattgttttacaaggacatgct
acaagagtaactgctaaatctcaacagagtggagagaaggcatttcgatgtgaatatgat
ggatgtggaaaattatatacaacagctcatcatctcaaggtccatgagaggtcacacaca
ggagatcggccttatcagtgtgagcatgcaggctgtgggaaggcatttgcaacaggttat
ggattaaaaagtcacgtcagaactcatacaggagaaaagccatatcggtgttcggaagat
aattgtactaaatctttcaaaacttcaggagatctacagaaacacatcagaactcataca
ggagaaaagccatatgtttgtacagttcctgggtgtgacaaaaggtttacagaatattcc
agtttgtacaaacatcatgttgtccacactcattccaaaccttacaactgtaaccactgt
gggaagacatacaagcagatctccacgctggccatgcacaaacggacagcccacaacgac
actgagcccatcgaggaggagcaggaagccttctttgagccgcccccaggtcaaggtgaa
gatgttcttaaagggtcccagattacgtatgttacaggtgtagaaggggacgacgttgtt
tctacacaagtagccacagtaacccaatctggactgagtcaacaagttacactcatatcc
caggatgggactcagcatgtcaacatatctcaagctgacatgcaggccattggcaacacc
atcacaatggtaacgcaggatggcacgcccatcacagtccccgcccatgatgcagtcatc
tcctcagcaggaacgcactctgttgctatggttactgctgagggtacagaaggggaacag
gttgcaattgtagctcaagacttggcagcattccatactgcctcatcagaaatggggcac
cagcagcatagccatcacttagtaaccacagaaaccagacctctgaccttagtagcaaca
tccaatggcacccagattgcagttcagcttggagaacagccatctctggaagaagccatc
agaatagcgtctagaatccaacaaggagaaacgccagggttggatgattaa

>gi568815587f:9284764_9545191|GENSCAN_predicted_peptide_3|236_aa
MIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIY
RFNAIPIKLPMTFFIELEKTTLKFIWNQKRSRIAKSILSQKNKAGGITLPDFKLYYKATV
TKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPEKNKKWGKDSLFNKWCWEN

>gi568815587f:9284764_9545191|GENSCAN_predicted_CDS_3|711_bp
atgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatac
accaacaacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggag
aactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattcca
tgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttac
agattcaatgccatccccattaagctaccaatgactttcttcatagaattggaaaaaact
actttaaagttcatatggaaccaaaaaagatcccgcatcgccaagtcaatcctgagccaa
aagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagta
accaaaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaacagag
ccctcagaaataatgccgcatatctacaactatctgatctttgacaaacctgagaaaaac
aagaaatggggaaaggattccctatttaataaatggtgctgggaaaactag

>gi568815587f:9284764_9545191|GENSCAN_predicted_peptide_4|466_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDFYRTLHPKSTEYTFFSAPHHTYS
KIDHIVGSKAPLSKRKRTEIITNYLSDHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKTDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESKSWFFERINKIDRPLARLIK
KKREKNQIDAIKNDKGDITTDPTEIQTTIRECYKHVYANKLENLEEMDKFLDTYTLPRLN
QEEVESLNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLELFQSIEKE
GILPNSFYEASIILIPKLGRDTTKKENFRPISLMNIDAKILNKILANRIQQHMKKLIHHD
QVGFIPGMQGWFNIRKSINVIQHINRTKDKNHMIISIDAEKAFDKI

>gi568815587f:9284764_9545191|GENSCAN_predicted_CDS_4|1401_bp
atgggagactttaacaccccactgtcaacattagacagatcaaccagacagaaagtcaac
aaggatacccaggaattgaactcagctctgcaccaagcagacctaatagacttctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatagttggaagtaaagctcccctcagcaaacgtaaaagaacagaaatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaaaccgctcaactacatggaaactaaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacaca
acataccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaactgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaattaacgaatcc
aagagctggttttttgaaaggatcaacaaaattgatagaccactagcaagactaataaag
aaaaaaagagagaagaatcaaatagacgcaataaaaaatgataaaggggatatcaccacc
gatcccacagaaatacaaactaccatcagagaatgctacaaacatgtctacgcaaataaa
ctagaaaatctagaagaaatggataaattcctcgacacatacaccctcccaagactaaac
caggaagaagttgaatctctgaatagaccaataacaggagctgaaattgtggcaataatc
aatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggaactggtaccattccttctggaactattccaatcaatagaaaaagag
ggaatcctccctaactcattttatgaggccagcatcatcctgataccaaagctgggcaga
gacacaaccaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatc
ctcaataaaatactggcaaaccgaatccagcagcacatgaaaaagcttatccaccatgat
caagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaatcaataaatgta
atccagcatataaacagaaccaaagacaaaaaccacatgattatctcaatagatgcagaa
aaggcctttgacaaaatttaa