GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:21:27

Sequence gi568815588r:101127273_101328815 : 201543 bp : 50.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4270   4837  568  0  1  109  109   594 0.982  58.83
 1.02 Intr +   6903   7104  202  1  1   68   83   400 0.535  35.84
 1.03 Intr +   9419   9637  219  2  0   55   46   354 0.676  25.32
 1.04 Intr +  12165  12348  184  0  1  105   46    41 0.486   1.39
 1.05 Intr +  12753  12888  136  2  1  118   96    48 0.848   8.74
 1.06 Intr +  14653  14748   96  2  0  132   79    -8 0.779   2.68
 1.07 Intr +  15005  15132  128  0  2   47   72    76 0.891   2.30
 1.08 Intr +  18402  18539  138  2  0   56  105    39 0.434   3.06
 1.09 Intr +  19725  19846  122  2  2   44   61    94 0.302   1.59
 1.10 Intr +  34588  34709  122  1  2   48   76   101 0.123   5.04
 1.11 Intr +  39869  39941   73  0  1   16   92    53 0.002  -3.04
 1.12 Intr +  54366  54473  108  0  0   87   90    36 0.002   3.10
 1.13 Term +  64038  64176  139  0  1   95   35    88 0.076   1.64
 1.14 PlyA +  67398  67403    6                               1.05

 2.00 Prom +  71048  71087   40                              -1.46
 2.01 Init +  78082  78242  161  0  2   67   97    84 0.814   4.51
 2.02 Intr +  83796  83824   29  0  2  124  105    -8 0.608   2.26
 2.03 Intr +  90263  90365  103  0  1   79   14   157 0.849   6.63
 2.04 Intr +  90703  90808  106  1  1   87   97    64 0.308   7.42
 2.05 Term +  99616  99666   51  0  0   90   42    99 0.621   2.93
 2.06 PlyA +  99675  99680    6                               1.05

 3.07 PlyA -  99829  99824    6                               1.05
 3.06 Term - 100518  99998  521  1  2  101   53   991 0.999  91.36
 3.05 Intr - 101658 101219  440  2  2   35  102   635 0.686  52.76
 3.04 Intr - 101931 101660  272  0  2   91   15   166 0.308   5.94
 3.03 Intr - 109071 108917  155  1  2  113   46    41 0.665   2.19
 3.02 Intr - 109640 109493  148  2  1   68   71   117 0.990   7.81
 3.01 Init - 113708 113628   81  2  0   70   96   119 0.994  10.39
 3.00 Prom - 130543 130504   40                              -6.66

 4.10 PlyA - 130631 130626    6                               1.05
 4.09 Term - 133338 133183  156  0  0   92   48    49 0.600  -0.77
 4.08 Intr - 133947 133787  161  1  2   79   58    99 0.146   5.71
 4.07 Intr - 143963 143822  142  2  1  118  115   -59 0.489  -0.27
 4.06 Intr - 147260 147135  126  2  0  124   21    75 0.659   5.28
 4.05 Intr - 164390 164124  267  2  0   73   27   104 0.074   0.53
 4.04 Intr - 170426 170352   75  2  0   99   52    51 0.062   2.31
 4.03 Intr - 174882 174846   37  2  1   80  105    33 0.009   2.46
 4.02 Intr - 178015 177891  125  1  2  127   48     7 0.006  -0.02
 4.01 Intr - 195731 195703   29  0  2  137   61    16 0.143   1.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:101127273_101328815|GENSCAN_predicted_peptide_1|744_aa
MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGG
GSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSS
GGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESN
RRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKM
TDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPLPADPLCVHN
SSLFALQNLQPWSDDSTKITSVTSVASACEPAECSGWALTSCVERSEQVLAAAPGLLQVS
RIHRLWHPAPGRAKSRNSLQHLRSRLPLPGQPPSSGTSQGSHSLTAESTCRPEPSARQLS
DPAQLDADSCRRGHSAAPTEEDLTPFPAGLGVGVVLGAGFRFQPCSSGEPTFLWLLREEP
KDPKAGGRGRDSAATQKWELDLGLGHRNPERQPDVLACLGVSPPEEAKHKRSQRSTELLS
CQGTPAWRCQAMRWRQPLAASLKDRGKGKATRAQVLLISVEEKHPGVPVTWKFPVAVLVQ
RKEFPQMPEFRAAITLNGHKGELVPCNCVFQRLCRVPQGSLQPDPSPDATRTGWVLSPEL
NCGDNSPHSTNNLANFHQFQVRIGSLDSGPDISAVPHVGLCNNQPGFSPNVGIVLEPRPS
KAPPPANITYLIFLFSTSPTLSKR

>gi568815588r:101127273_101328815|GENSCAN_predicted_CDS_1|2235_bp
atggagcacctgggtccgcaccacctccacccgggtcacgcagagcccattagcttcggc
atcgaccagatcctcaacagcccggaccagggtggctgcatgggacccgcctcgcgcctc
caggacggagaatacggccttggctgcttggtcggaggcgcctacacttacggcggcggg
ggctccgcggccgcgacgggggctggaggagcgggggcctatggtactggaggtcccggc
ggccccggaggcccggcaggcggcggcggcgcctgcagcatgggtcctctgaccggctcc
tacaacgtgaacatggccttggcaggcggccccggtcctggcggcggcggcggcagcagc
ggcggtgccggggcactcagcgctgcgggggtaatccgggtgccggcacacaggccgctc
gccggagccgtggcccacccccagcccctggccaccggcttgcccaccgtgccctctgtg
cctgccatgccgggcgtcaacaacctcactggcctcaccttcccctggatggagagtaac
cgcagatacacaaaggacaggttcacaggtcacccctatcagaaccggacgccccccaag
aagaagaagccgcgcacgtccttcacacgcctgcagatctgcgagctggagaagcgcttc
caccgccagaagtacctggcctcggccgagcgcgccgccctggccaaggcgctcaaaatg
accgatgcgcaggtcaaaacctggttccagaaccggcggacaaagtggagacggcagact
gcggaggaacgggaggccgagaggcagcaagcgaaccgcatcctcctgcagttgcagcag
gaggccttccagaagagcctggcacagccgctgcccgctgaccctctgtgcgtgcacaac
tcgtcgctcttcgccctgcagaatctgcagccgtggtctgacgactcgaccaaaatcact
agcgtcacgtcggtggcgtcggcctgcgagcccgcggagtgctcaggttgggccctgacg
agctgtgtggagcgtagtgagcaggttctggcggcagcgccgggtctgctgcaggtctcc
cgcattcaccggctgtggcacccagcgccaggccgcgcaaaatccagaaatagcctccag
cacctcagaagtcgtctccctctacctgggcagcccccatcttcaggaacatcacagggc
tcacactcactaaccgcggagagcacatgcaggccggagccctcagcccggcagctctcg
gaccctgcccagctcgacgcggactcatgcagaagaggacattccgcagcccctacagag
gaggatctaactccattcccagctggcctgggggtgggggttgtcttaggagctggcttc
aggttccagccctgcagctcgggtgaacccacatttctttggttgctgcgagaagagcca
aaagacccaaaagctggaggccgcggccgtgattcagcagccacccagaagtgggagctg
gacctgggacttggtcacagaaacccagaacgacagcctgatgtcctggcttgtcttggg
gtgtcacctccagaagaagccaagcacaaacgttcacagagatccactgagctcctgagc
tgccaagggacacctgcatggaggtgccaggccatgcgctggagacagcccctcgcagcc
tccctgaaggatcggggcaagggcaaggccacgagagctcaggtgctgttaatttccgtt
gaggagaagcaccctggggtccctgtcacttggaaattccctgtggcagtgcttgttcag
aggaaggaattcccccagatgcctgagttcagggctgctatcaccctgaatggccacaag
ggggagctcgtgccctgtaattgtgtgtttcagcgcctgtgccgtgtgccgcaaggatcc
ctgcagccagatccttctcctgatgccaccaggactggatgggtcctcagtcctgaactg
aactgtggtgacaactccccacattccaccaataatcttgccaatttccatcaatttcag
gtccgtattggaagccttgactctggcccagacatttctgctgtacctcatgtaggtctc
tgcaataaccaacctgggttctctcctaatgtggggattgtcctggagcccaggccttcc
aaggctcctccgcccgccaacatcacctacctcatcttcctcttcagcacatccccaaca
ttgtctaagcggtaa

>gi568815588r:101127273_101328815|GENSCAN_predicted_peptide_2|149_aa
MLKGKAATLKSHMPYLAQLPASGPKESRAQAPQPQRTGSILVSHCQLSSAISLRDQLHIF
GGKVSPARIVRSRPQTLNTERKGFHPGDLETSDARATSASSIQPNGLEHSAPSRGNWEAQ
HPAAAERMAGLVPQTRQPESFENIEISEI

>gi568815588r:101127273_101328815|GENSCAN_predicted_CDS_2|450_bp
atgctgaaaggaaaggctgccaccctgaagtcgcacatgccctaccttgcccagctcccg
gcgagcggcccgaaggagagcagagcacaggctccacagcctcagagaacaggctcgatt
ctggtctcccactgccaactgtcatctgcgatcagcctcagagatcagttacatatcttt
ggtgggaaagtctctccggcccgaattgtccgctccaggccccagacgctgaacacggaa
cgaaaaggcttccatcctggagacctggagacgagtgacgccagagcgacctcagccagt
tccatccagccaaacggcctggagcactcagcgcccagccgggggaactgggaggcccaa
cacccggctgcagccgagcgcatggctggcctggtaccgcaaacccggcagcccgagagc
tttgaaaacatcgaaatctccgagatttaa

>gi568815588r:101127273_101328815|GENSCAN_predicted_peptide_3|538_aa
MTAEVVLVPPVATLVALSVTARKADGQGKESPGQDEAARRDPGSEHRSEPGVFTVLGTTP
PTFPVRLGTADAGFSTGPSTFPPGLSSGPMPGLRPAPPDSSETSVKGRELTTINGFWSDF
DVSGPFELSGIGALASALPTAAARTRGQEPLPSHLTPLNSTGVGETGAPRSAPRLRPRIA
GSPSSSGARVSALFPGPRAVLPSSAAALIGPAPGPRPAHAASFPPAAACPRRPAPELPAG
WVPAARAAPAGTPNKAEMTSKEDGKAAPGEERRRSPLDHLPPPANSNKPLTPFSIEDILN
KPSVRRSYSLCGAAHLLAAADKHAQGGLPLAGRALLSQTSPLCALEELASKTFKGLEVSV
LQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLG
LTNAQVITWFQNRRAKLKRDLEEMKADVESAKKLGPSGQMDIVALAELEQNSEATAGGGG
GCGRAKSRPGSPVLPPGAPKAPGAGALQLSPASPLTDQPASSQDCSEDEEDEEIDVDD

>gi568815588r:101127273_101328815|GENSCAN_predicted_CDS_3|1617_bp
atgactgcagaggtggttcttgttcccccagtggccaccctagtggctctgtcggtcaca
gcccggaaagcagatggccagggcaaggaaagtcctggccaggacgaagcagcccggagg
gatcccggctctgagcacagatccgagcctggcgtcttcactgtgcttggaaccacgccg
cccacgttccctgtgcggctgggcactgcagatgctgggttttccacaggtccttccacc
tttccacctggcctaagctcaggccccatgcccggcctgcgcccggcgccccccgacagt
agtgagacctctgtgaaagggagggagctgactaccattaacggtttttggtcagacttt
gatgtttctgggccgtttgagttatccgggatcggcgccctcgcctcggctcttccaact
gcggccgccaggacccggggccaggagccactgccgagccacctgacacctttaaatagc
accggggttggcgaaactggagccccgcgcagcgcgccccggctccggccccggattgct
ggaagccccagcagcagcggcgcccgcgtcagcgccctcttcccggggccccgcgctgtt
ctcccctcctcagccgccgcgctaatcggccccgcgcccggcccgcgccctgcccatgcg
gcctcctttccacccgccgctgcctgcccgcgccgtccggcgcccgagctgcccgcgggc
tgggtccccgcggcccgagccgccccggccgggaccccgaacaaggccgagatgacttcc
aaggaggacggcaaggcggcgccgggggaggagcggcggcgcagcccgctggaccacctg
cctccgcctgccaactccaacaagccactgacgccgttcagcatcgaggacatcctcaac
aagccgtctgtgcggagaagttactcgctgtgcggggcggcgcacctgctggccgccgcg
gacaagcacgcgcagggcggcttgcccctggcgggccgcgcgctgctctcgcagacctcg
ccgctgtgcgcgctggaggagctcgccagcaagacgtttaaggggctggaggtcagcgtt
ctgcaggcagccgaaggccgcgacggtatgaccatctttgggcagcggcagacccctaag
aagcggcgaaagtcgcgcacggccttcaccaaccaccagatctatgaattggaaaagcgc
tttctataccagaagtacctgtcccccgccgatcgcgaccaaatcgcgcagcagctgggc
ctcaccaacgcgcaagtcatcacctggttccagaatcggcgcgctaagctcaagcgggac
ctggaggagatgaaggccgacgtagagtccgccaagaaactgggccccagcgggcagatg
gacatcgtggcgctggccgaactcgagcagaactcggaggccacagccggcggtggcggc
ggctgcggcagggccaagtcgaggcccggctctccggtcctccccccaggcgccccgaag
gccccgggcgctggcgccctgcagctctcgcctgcctctccgctcacggaccagccggcc
agcagccaggactgctcggaggacgaggaagacgaagagatcgacgtggacgattga

>gi568815588r:101127273_101328815|GENSCAN_predicted_peptide_4|372_aa
XASEPRAAVKGSAAGFLTLLLISEILGHHLSPSWRQMNLQTGVSSGEGQPGRARPGPHIQ
EVGLVPSHQQSSDECQAPLALQLPLFIPLGGRTATPPNSCPKGRNLLAFLVLALAPWDPR
APGKRPKARSPAQGWPLSPEDPQGRGRRGMEALGDLGLRSPARERGRVSGTSCAKGPSVI
AENGQFLHLSPDLLSESGHRTPVPAPSPIKIPSSVPSPLLATGLWGMPLSLSEMLFPLLF
THVMPLILSISAQLWLPQNSLALTPKAGQQPLAAAFHSGPFEAFGPQAEEPPPAVGLLES
PAGKQTGGGSNPGGEAPGSPDLNLEPDFRESPLLFIHLFSKLLPNACSVPGNRNTLVDTI
ELGPVFMEINFT

>gi568815588r:101127273_101328815|GENSCAN_predicted_CDS_4|1119_bp
natgcctcagagccccgggccgcagttaagggctctgcagctggatttctgactcttcta
ctgatctctgaaatcctggggcaccacctctcaccttcatggagacagatgaaccttcag
acaggggtgtcttcaggggaggggcagcccggcagggccagacctggtcctcatatccag
gaagtaggcctggttcccagccaccaacagtcctctgatgaatgtcaggccccgctggcc
ctgcaattacctctgttcatccctcttggtgggcgtacggcgactccccccaactcctgc
cccaaaggaaggaaccttctggctttcctggtgttggccctggcgccctgggaccctaga
gccccggggaagcgcccaaaggctaggtcaccggcccagggctggccactgtccccggaa
gacccccaaggccgcggccgacgcggcatggaggcgctgggagatctgggccttcgcagc
ccggctagggagcgtggacgagtctccgggacatcctgcgcgaagggtccttctgttatt
gcagagaacggccagttcctgcacttgtccccagacctcctctctgaaagtgggcaccgg
acaccggtccctgcccccagcccaatcaaaattccctcttctgttccctctccactgctg
gccacagggctttggggcatgccgctttccctgtctgaaatgcttttccctcttctcttc
acccatgtaatgcctcttatcctttcaatatcagctcagctgtggcttcctcagaacagc
cttgccctgactcctaaggcaggccagcagcctctggccgcggcattccactctgggccc
tttgaagcctttgggccacaagcggaggagccgccccctgccgtggggctcctagaatct
ccagctggaaaacaaaccggaggaggaagtaatcctggaggggaagctccagggtcccca
gacctcaacctcgaacctgacttcagagaaagcccactcctcttcattcatctgttcagc
aaactcttaccaaacgcttgttctgtgccaggcaacaggaatacattggtggacacgata
gagctaggtcctgtcttcatggagatcaactttacttga