Result of FASTA (ccds) for pF1KE9424
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE9424, 361 aa
  1>>>pF1KE9424 361 - 361 aa - 361 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5408+/-0.00105; mu= 14.8647+/- 0.062
 mean_var=99.3781+/-27.889, 0's: 0 Z-trim(104.0): 227  B-trim: 1000 in 2/48
 Lambda= 0.128656
 statistics sampled from 7394 (7685) to 7394 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.585), E-opt: 0.2 (0.236), width:  16
 Scan time:  2.690

The best scores are:                                      opt bits E(32554)
CCDS55720.1 FFAR4 gene_id:338557|Hs108|chr10       ( 361) 2378 452.5 2.6e-127
CCDS31248.1 FFAR4 gene_id:338557|Hs108|chr10       ( 377) 1521 293.4 2.1e-79
CCDS3791.1 NPY2R gene_id:4887|Hs108|chr4           ( 381)  340 74.2   2e-13
CCDS4321.1 NMUR2 gene_id:56923|Hs108|chr5          ( 415)  306 67.9 1.7e-11
CCDS7606.1 PRLHR gene_id:2834|Hs108|chr10          ( 370)  297 66.2   5e-11
CCDS3719.1 QRFPR gene_id:84109|Hs108|chr4          ( 431)  294 65.7 8.2e-11


>>CCDS55720.1 FFAR4 gene_id:338557|Hs108|chr10            (361 aa)
 initn: 2378 init1: 2378 opt: 2378  Z-score: 2399.0  bits: 452.5 E(32554): 2.6e-127
Smith-Waterman score: 2378; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361)

               10        20        30        40        50        60
pF1KE9 MSPECARAAGDAPLRSLEQANRTRFPFFSDVKGDHRLVLAAVETTVLVLIFAVSLLGNVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MSPECARAAGDAPLRSLEQANRTRFPFFSDVKGDHRLVLAAVETTVLVLIFAVSLLGNVC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 ALVLVARRRRRGATACLVLNLFCADLLFISAIPLVLAVRWTEAWLLGPVACHLLFYVMTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ALVLVARRRRRGATACLVLNLFCADLLFISAIPLVLAVRWTEAWLLGPVACHLLFYVMTL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 SGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYSAVAALPLCVFFRVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYSAVAALPLCVFFRVV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 PQRLPGADQEISICTLIWPTIPGEISWDVSFVTLNFLVPGLVIVISYSKILQITKASRKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PQRLPGADQEISICTLIWPTIPGEISWDVSFVTLNFLVPGLVIVISYSKILQITKASRKR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 LTVSLAYSESHQIRVSQQDFRLFRTLFLLMVSFFIMWSPIIITILLILIQNFKQDLVIWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LTVSLAYSESHQIRVSQQDFRLFRTLFLLMVSFFIMWSPIIITILLILIQNFKQDLVIWP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE9 SLFFWVVAFTFANSALNPILYNMTLCRNEWKKIFCCFWFPEKGAILTDTSVKRNDLSIIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SLFFWVVAFTFANSALNPILYNMTLCRNEWKKIFCCFWFPEKGAILTDTSVKRNDLSIIS
              310       320       330       340       350       360

        
pF1KE9 G
       :
CCDS55 G
        

>>CCDS31248.1 FFAR4 gene_id:338557|Hs108|chr10            (377 aa)
 initn: 1521 init1: 1521 opt: 1521  Z-score: 1539.1  bits: 293.4 E(32554): 2.1e-79
Smith-Waterman score: 2336; 95.8% identity (95.8% similar) in 377 aa overlap (1-361:1-377)

               10        20        30        40        50        60
pF1KE9 MSPECARAAGDAPLRSLEQANRTRFPFFSDVKGDHRLVLAAVETTVLVLIFAVSLLGNVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MSPECARAAGDAPLRSLEQANRTRFPFFSDVKGDHRLVLAAVETTVLVLIFAVSLLGNVC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 ALVLVARRRRRGATACLVLNLFCADLLFISAIPLVLAVRWTEAWLLGPVACHLLFYVMTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ALVLVARRRRRGATACLVLNLFCADLLFISAIPLVLAVRWTEAWLLGPVACHLLFYVMTL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 SGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYSAVAALPLCVFFRVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYSAVAALPLCVFFRVV
              130       140       150       160       170       180

              190       200       210       220       230          
pF1KE9 PQRLPGADQEISICTLIWPTIPGEISWDVSFVTLNFLVPGLVIVISYSKILQ--------
       ::::::::::::::::::::::::::::::::::::::::::::::::::::        
CCDS31 PQRLPGADQEISICTLIWPTIPGEISWDVSFVTLNFLVPGLVIVISYSKILQTSEHLLDA
              190       200       210       220       230       240

                    240       250       260       270       280    
pF1KE9 --------ITKASRKRLTVSLAYSESHQIRVSQQDFRLFRTLFLLMVSFFIMWSPIIITI
               ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RAVVTHSEITKASRKRLTVSLAYSESHQIRVSQQDFRLFRTLFLLMVSFFIMWSPIIITI
              250       260       270       280       290       300

          290       300       310       320       330       340    
pF1KE9 LLILIQNFKQDLVIWPSLFFWVVAFTFANSALNPILYNMTLCRNEWKKIFCCFWFPEKGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LLILIQNFKQDLVIWPSLFFWVVAFTFANSALNPILYNMTLCRNEWKKIFCCFWFPEKGA
              310       320       330       340       350       360

          350       360 
pF1KE9 ILTDTSVKRNDLSIISG
       :::::::::::::::::
CCDS31 ILTDTSVKRNDLSIISG
              370       

>>CCDS3791.1 NPY2R gene_id:4887|Hs108|chr4                (381 aa)
 initn: 249 init1: 127 opt: 340  Z-score: 354.4  bits: 74.2 E(32554): 2e-13
Smith-Waterman score: 348; 29.1% identity (57.3% similar) in 323 aa overlap (46-351:52-355)

          20        30        40        50             60        70
pF1KE9 SLEQANRTRFPFFSDVKGDHRLVLAAVETTVLVLIF-AVSLLG----NVCALVLVARRRR
                                     ::.: . .. :::    ..   :..  .  
CCDS37 YGPQTTPRGELVPDPEPELIDSTKLIEVQVVLILAYCSIILLGVIGNSLVIHVVIKFKSM
              30        40        50        60        70        80 

               80        90        100       110       120         
pF1KE9 RGATACLVLNLFCADLLFIS-AIPLVLAVRWTEAWLLGPVACHLLFYVMTLSGSVTILTL
       : .:  .. ::  ::::  .  .:..:.      : .::: :::. :.. :. .:. .::
CCDS37 RTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITL
              90       100       110       120       130       140 

     130       140        150       160       170        180       
pF1KE9 AAVSLERMVCIV-HLQRGVRGPGRRARAVLLALIWGYSAVAALPLCVFFRV-VPQRLPGA
       ....:.:  ::: ::.  .   ..:   ....: :: ::. : :: .: .  . . .:  
CCDS37 TVIALDRHRCIVYHLESKI---SKRISFLIIGLAWGISALLASPLAIFREYSLIEIIP--
             150       160          170       180       190        

       190           200       210       220       230       240   
pF1KE9 DQEISICTLIWP----TIPGEISWDVSFVTLNFLVPGLVIVISYSKILQITKASRKRLTV
       : ::  ::  ::    .: : . ...: . . ...:  .: .::..: .  :   .... 
CCDS37 DFEIVACTEKWPGEEKSIYGTV-YSLSSLLILYVLPLGIISFSYTRIWSKLK---NHVSP
        200       210        220       230       240          250  

           250       260       270       280       290       300   
pF1KE9 SLAYSESHQIRVSQQDFRLFRTLFLLMVSFFIMWSPIIITILLILIQNFKQDLVIWPSLF
       . : .. :: :  :.  ..   :  ..: : . : :.    : . :..   ::  .  .:
CCDS37 GAANDHYHQRR--QKTTKM---LVCVVVVFAVSWLPLHAFQLAVDIDSQVLDLKEYKLIF
            260            270       280       290       300       

               310       320       330       340        350        
pF1KE9 --FWVVAF--TFANSALNPILYNMTLCRNEWKKIFCCFWFPEK-GAILTDTSVKRNDLSI
         : ..:.  :::    ::.::.  .  :  : ..  :   ..  :: ...::       
CCDS37 TVFHIIAMCSTFA----NPLLYGW-MNSNYRKAFLSAFRCEQRLDAIHSEVSVTFKAKKN
       310       320            330       340       350       360  

      360                 
pF1KE9 ISG                
                          
CCDS37 LEVRKNSGPNDSFTEATNV
            370       380 

>>CCDS4321.1 NMUR2 gene_id:56923|Hs108|chr5               (415 aa)
 initn: 210 init1: 142 opt: 306  Z-score: 319.8  bits: 67.9 E(32554): 1.7e-11
Smith-Waterman score: 306; 27.9% identity (59.2% similar) in 326 aa overlap (13-323:21-329)

                       10        20        30        40        50  
pF1KE9         MSPECARAAGDAPLRSLEQANRTRFPFFSDVKGDHRLVLAAVETTVLVLIFA
                           :...  ....  . :.   . .: .. ..:   : : ::.
CCDS43 MSGMEKLQNASWIYQQKLEDPFQKHLNSTEEYLAFLCGPRRSHFFLPVSV---VYVPIFV
               10        20        30        40        50          

               60        70        80         90       100         
pF1KE9 VSLLGNV--CALVLVARRRRRGATACLVLNLFCADLL-FISAIPLVLAVRWTE-AWLLGP
       :...:::  : ::.. ..  .  :   ...:  .::: .. ..:: .   : .  .:.::
CCDS43 VGVIGNVLVC-LVILQHQAMKTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNYPFLFGP
        60         70        80        90       100       110      

      110       120       130       140       150       160        
pF1KE9 VACHLLFYVMTLSGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYSAV
       :.:..   ..     ..::....::.::.: :.:  :.     ::    .:...::.:..
CCDS43 VGCYFKTALFETVCFASILSITTVSVERYVAILHPFRAKLQSTRRRALRILGIVWGFSVL
        120       130       140       150       160       170      

      170           180         190       200        210       220 
pF1KE9 AALPLC----VFFRVVPQR--LPGADQEISICTLIWPT-IPGEISWDVSFVTLNFLVPGL
        .::      . :.  :.   .::.    . ::.: :  : . :   .::  : .:.:  
CCDS43 FSLPNTSIHGIKFHYFPNGSLVPGS----ATCTVIKPMWIYNFIIQVTSF--LFYLLPMT
        180       190       200           210       220         230

             230       240       250       260         270         
pF1KE9 VIVISYSKILQITKASRKRLTVSLAYSESHQIRVSQQDFR--LFRTLFLLMVSFFIMWSP
       :: . :  .     : : .   ::  .:..     :.  :  . . ::.:.. : : :.:
CCDS43 VISVLYYLM-----ALRLKKDKSLEADEGNA--NIQRPCRKSVNKMLFVLVLVFAICWAP
                   240       250         260       270       280   

     280        290       300        310       320       330       
pF1KE9 IIITILLI-LIQNFKQDLVIWPSLFFWVVA-FTFANSALNPILYNMTLCRNEWKKIFCCF
       . :  :.. ........:.   .:   : . : . .::.:::.::.              
CCDS43 FHIDRLFFSFVEEWSESLAAVFNLVHVVSGVFFYLSSAVNPIIYNLLSRRFQAAFQNVIS
           290       300       310       320       330       340   

       340       350       360                                     
pF1KE9 WFPEKGAILTDTSVKRNDLSIISG                                    
                                                                   
CCDS43 SFHKQWHSQHDPQLPPAQRNIFLTECHFVELTEDIGPQFPCQSSMHNSHLPAALSSEQMS
           350       360       370       380       390       400   

>>CCDS7606.1 PRLHR gene_id:2834|Hs108|chr10               (370 aa)
 initn: 202 init1:  97 opt: 297  Z-score: 311.4  bits: 66.2 E(32554): 5e-11
Smith-Waterman score: 338; 27.5% identity (56.7% similar) in 353 aa overlap (2-344:24-358)

                                     10        20        30        
pF1KE9                       MSPECARAAGDAPLRSLEQANRTRFPFFSDVKGDHRLV
                              .:    : ..:   :.  :.      :....  :.: 
CCDS76 MASSTTRGPRVSDLFSGLPPAVTTPANQSAEASAGNGSVAGADAPAVTPFQSLQLVHQLK
               10        20        30        40        50        60

       40        50        60        70          80        90      
pF1KE9 LAAVETTVLVLIFAVSLLGNVCALVLVARRRRR--GATACLVLNLFCADLLFISA-IPLV
          :    .:..  :.:.:: : ::::  : ::  ..:  :. ::  .:.:. .: .::.
CCDS76 GLIVLLYSVVVV--VGLVGN-CLLVLVIARVRRLHNVTNFLIGNLALSDVLMCTACVPLT
               70           80        90       100       110       

         100        110       120       130       140       150    
pF1KE9 LAVRWT-EAWLLGPVACHLLFYVMTLSGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRA
       ::  .  ..:..:   :::.:... ..  :...::......:.: .::  :  :  . : 
CCDS76 LAYAFEPRGWVFGGGLCHLVFFLQPVTVYVSVFTLTTIAVDRYVVLVHPLR--RRISLRL
       120       130       140       150       160         170     

          160       170       180       190       200          210 
pF1KE9 RAVLLALIWGYSAVAALPLCVFFRVVPQRLPGADQEISICTLIWPTIPGE---ISWDVSF
        :  .  ::. ::: :::  :    :  . :   ... .:  .: .   .    .: . .
CCDS76 SAYAVLAIWALSAVLALPAAVHTYHVELK-P---HDVRLCEEFWGSQERQRQLYAWGLLL
         180       190       200           210       220       230 

             220       230       240        250       260       270
pF1KE9 VTLNFLVPGLVIVISYSKILQITKASRKRLTVS-LAYSESHQIRVSQQDFRLFRTLFLLM
       ::  .:.: :::..::   ....   :.:.. . .. :..   :. ..  : :  : ...
CCDS76 VT--YLLPLLVILLSY---VRVSVKLRNRVVPGCVTQSQADWDRARRR--RTFCLLVVIV
               240          250       260       270         280    

              280       290       300       310       320          
pF1KE9 VSFFIMWSPIIITILLILIQNFKQDLVIWPSLFFWVVAFTFANSALNPILYNMTL--CRN
       : : . : :. .  ::  ..    :   .  . .    ......  ::..:       :.
CCDS76 VVFAVCWLPLHVFNLLRDLDPHAIDPYAFGLVQLLCHWLAMSSACYNPFIYAWLHDSFRE
          290       300       310       320       330       340    

      330       340       350       360 
pF1KE9 EWKKIFCCFWFPEKGAILTDTSVKRNDLSIISG
       : .:..   : :.: :                 
CCDS76 ELRKLLVA-W-PRKIAPHGQNMTVSVVI     
          350         360       370     

>>CCDS3719.1 QRFPR gene_id:84109|Hs108|chr4               (431 aa)
 initn: 222 init1: 146 opt: 294  Z-score: 307.5  bits: 65.7 E(32554): 8.2e-11
Smith-Waterman score: 294; 26.2% identity (58.5% similar) in 313 aa overlap (36-336:43-350)

          10        20        30        40        50        60     
pF1KE9 ARAAGDAPLRSLEQANRTRFPFFSDVKGDHRLVLAAVETTVLVLIFAVSLLGNVCALVLV
                                     :  :: : : :  ::::..:.::. .. .:
CCDS37 RLLRDHNLTREQFIALYRLRPLVYTPELPGRAKLALVLTGV--LIFALALFGNALVFYVV
             20        30        40        50          60        70

          70         80         90       100       110       120   
pF1KE9 ARRRR-RGATACLVLNLFCADLLF-ISAIPLVLAVRWTEAWLLGPVACHLLFYVMTLSGS
       .: .  : .:  .. .:  .:::. .  ::...    .. :: :   :... .:.. .  
CCDS37 TRSKAMRTVTNIFICSLALSDLLITFFCIPVTMLQNISDNWLGGAFICKMVPFVQSTAVV
               80        90       100       110       120       130

           130       140        150       160       170       180  
pF1KE9 VTILTLAAVSLERMVCIVH-LQRGVRGPGRRARAVLLALIWGYSAVAALPLCVFFRVVPQ
       . :::.. ...::   .:: ..   .  .::: . .:...:  ..... :.    . .  
CCDS37 TEILTMTCIAVERHQGLVHPFKMKWQYTNRRAFT-MLGVVWLVAVIVGSPM-WHVQQLEI
              140       150       160        170       180         

            190       200       210        220       230       240 
pF1KE9 RLPGADQEISICTLIWPTIPGEISWDVSFV-TLNFLVPGLVIVISYSKILQITKASRKRL
       .     ..  :: :   : : . .  ..:. .. ::.: .:..: ::::       .::.
CCDS37 KYDFLYEKEHICCLEEWTSPVHQKIYTTFILVILFLLPLMVMLILYSKI-GYELWIKKRV
      190       200       210       220       230        240       

             250       260       270          280       290        
pF1KE9 TVSLAYSESHQIRVSQQDFRLFRTLFLLM--VSFF-IMWSPIIITILLILIQNFKQ--DL
         . .    :  ..:.   .  :......  :..: . :.:. .. ..:  .::..  : 
CCDS37 GDGSVLRTIHGKEMSKIARKKKRAVIMMVTVVALFAVCWAPFHVVHMMIEYSNFEKEYDD
       250       260       270       280       290       300       

        300       310       320          330       340       350   
pF1KE9 VIWPSLFFWVVAFTFANSALNPILY---NMTLCRNEWKKIFCCFWFPEKGAILTDTSVKR
       :    .:  :  . :.::  :::.:   : .. .:  . .  :                 
CCDS37 VTIKMIFAIVQIIGFSNSICNPIVYAFMNENFKKNVLSAVCYCIVNKTFSPAQRHGNSGI
       310       320       330       340       350       360       

           360                                                     
pF1KE9 NDLSIISG                                                    
                                                                   
CCDS37 TMMRKKAKFSLRENPVEETKGEAFSDGNIEVKLCEQTEEKKKLKRHLALFRSELAENSPL
       370       380       390       400       410       420       




361 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 12:36:55 2016 done: Sun Nov  6 12:36:56 2016
 Total Scan time:  2.690 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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