GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:42:17

Sequence gi568815597f:214983386_215335142 : 351757 bp : 36.75% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1329   1494  166  2  1   66   48    94 0.187   3.06
 1.02 Intr +   9306   9424  119  1  2   96   66    41 0.020   1.96
 1.03 Term +  22372  22521  150  0  0   53   45   163 0.351   5.43
 1.04 PlyA +  22758  22763    6                               1.05

 2.03 PlyA -  22820  22815    6                               1.05
 2.02 Term -  46990  46662  329  2  2   15   42   218 0.491   3.79
 2.01 Init -  54872  54809   64  2  1   49  105    45 0.496   3.66
 2.00 Prom -  58500  58461   40                              -6.05

 3.00 Prom +  59576  59615   40                              -2.75
 3.01 Init +  74260  74274   15  0  0   89  116     7 0.352   4.01
 3.02 Intr +  89650  89772  123  0  0   24  107    82 0.297   3.56
 3.03 Term +  90523  90678  156  0  0   51   42   102 0.376  -1.15
 3.04 PlyA +  91181  91186    6                               1.05

 4.04 PlyA -  91453  91448    6                               1.05
 4.03 Term -  92201  92095  107  0  2   17   41   131 0.665  -1.11
 4.02 Intr -  93217  93100  118  1  1   93  103    69 0.911   8.02
 4.01 Init -  93655  93581   75  1  0   43   59    85 0.912   2.24
 4.00 Prom -  95014  94975   40                              -5.75

 5.00 Prom +  95139  95178   40                              -5.45
 5.01 Init +  95260  95278   19  0  1   71  100    -2 0.465  -0.47
 5.02 Intr +  98737  98874  138  2  0   87   44   202 0.848  15.21
 5.03 Intr +  98960  99115  156  0  0   66   42   178 0.447  10.06
 5.04 Intr + 102983 103293  311  0  2   85   95   249 0.423  20.41
 5.05 Intr + 133149 133266  118  2  1   71  121    23 0.080   3.02
 5.06 Intr + 142092 142206  115  1  1   66   23   107 0.043   0.59
 5.07 Intr + 160940 161020   81  2  0   60   94    73 0.013   2.93
 5.08 Term + 163793 163844   52  2  1  110   41    51 0.206  -1.48
 5.09 PlyA + 165061 165066    6                               1.05

 6.03 PlyA - 167355 167350    6                               1.05
 6.02 Term - 176091 175934  158  1  2   72   54    92 0.722   1.31
 6.01 Init - 177598 177559   40  1  1   67  116    18 0.542   2.90
 6.00 Prom - 179404 179365   40                              -3.85

 7.02 PlyA - 179504 179499    6                               1.05
 7.01 Sngl - 180330 179824  507  0  0   51   48   299 0.727  17.99
 7.00 Prom - 181741 181702   40                              -7.65

 8.00 Prom + 184993 185032   40                              -4.75
 8.01 Init + 185173 185266   94  0  1   83   42    30 0.464  -1.51
 8.02 Intr + 185814 185974  161  1  2   26   68   113 0.624   1.89
 8.03 Intr + 188612 188798  187  1  1   81  115   122 0.839  12.54
 8.04 Term + 199056 199219  164  1  2   39   49   123 0.168   0.62
 8.05 PlyA + 201094 201099    6                               1.05

 9.00 Prom + 201252 201291   40                              -4.25
 9.01 Init + 206835 206868   34  2  1   68  116    29 0.057   3.79
 9.02 Intr + 211568 211707  140  0  2   95   78   118 0.051  10.76
 9.03 Term + 251443 251760  318  0  0   96   41   309 0.628  20.90
 9.04 PlyA + 252836 252841    6                               1.05

10.00 Prom + 261227 261266   40                              -6.75
10.01 Init + 267713 267790   78  1  0   32  110    22 0.057  -0.09
10.02 Intr + 270047 270207  161  1  2   87   59   124 0.071   7.26
10.03 Intr + 281144 281190   47  2  2   81   83    35 0.134  -0.57
10.04 Term + 286389 286681  293  1  2   45   45   383 0.898  24.22
10.05 PlyA + 287012 287017    6                               1.05

11.00 Prom + 288987 289026   40                              -6.55
11.01 Init + 289043 289121   79  1  1   84  115    16 0.537   5.17
11.02 Intr + 307010 307074   65  0  2  118  102    78 0.905   9.72
11.03 Term + 311277 311351   75  2  0   26   49   116 0.416  -1.64
11.04 PlyA + 313507 313512    6                               1.05

12.03 PlyA - 313802 313797    6                               1.05
12.02 Term - 315801 315712   90  0  0   96   40    95 0.181   2.24
12.01 Init - 326237 326115  123  2  0   54   45   102 0.340   2.72
12.00 Prom - 336412 336373   40                              -4.95

13.02 PlyA - 337021 337016    6                               1.05
13.01 Sngl - 341248 340859  390  1  0   87   53   209 0.735  13.27
13.00 Prom - 342960 342921   40                              -3.85


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_1|144_aa
MVVWVGPRCVQPSNLVPYIPDTPAMTKRGQGTAQTVASEGGSPNPWQLPHGVESEEYKLE
QGGNRATFAVSQHLQQCLAHARDFMRIYWKTKMKNETDLQGNIHTQKGNSMGRWLVSTSD
SVLEITDKKPWRKNGIKDQKHDDS

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_1|435_bp
atggttgtgtgggttgggcccaggtgtgtgcagcctagcaacttggtgccctacatcccg
gacactccagccatgactaaaaggggccaaggtacagctcagactgttgcttcagagggt
gggagccccaatccttggcagcttccacatggtgttgagtctgaggaatataaacttgag
caaggtggaaatcgtgccacttttgctgtatcccagcatctacagcagtgcctggcacat
gctagggacttcatgcgtatttattggaaaacaaaaatgaaaaacgaaactgatctacag
ggtaacattcacacacaaaaaggaaacagtatgggacgatggcttgttagtacaagtgac
tctgttttggaaattacggacaagaaaccttggaggaagaacggcattaaagatcaaaag
catgatgactcctga

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_2|130_aa
MNEDYHREGLLAEILKALEGTETIKKRERQATSWEKIFAMEIPDKGLYSKIKELLKLSNE
KTNNPIKKRVKDRNRHLIREDTQMTNKRMKRCFTLHVIRKMQIKITIRYYLLEWPKSRTL
RAPNAGKDVE

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_2|393_bp
atgaatgaggactaccatagggaaggcttacttgctgagattcttaaagccctggagggg
actgagactatcaagaaaagggaaagacaagccacaagctgggagaaaatatttgcaatg
gaaatacctgataaaggactgtattccaaaataaaagaactcttaaaactcagcaatgag
aaaacaaacaacccaattaaaaaacgggtcaaagaccgtaacagacacctcatcagagaa
gatacacaaatgacaaataagcgtatgaaaagatgcttcacattacatgtcatcaggaaa
atgcaaattaagataacaataagatactacctcttagaatggcccaaatccagaacactg
agagcaccaaatgctggcaaggatgtggaataa

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_3|97_aa
MEETKGEIWTQRQIHTKGKGCEDTQREGGHETGALRLQAKEHQGLLGCSLYPEGNGKLVR
DFNEKFNTSSQILFVKVPHDSVWKMDWRSVEWRPEER

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_3|294_bp
atggaagaaacaaagggggaaatttggacacagagacagatacacacaaagggaaaagga
tgtgaagacacacagagagaaggtggccatgagactggagcgctgcgtctacaagccaag
gaacaccaaggattgctgggatgtagtctctatcctgaaggcaatgggaagctagtgcgg
gattttaatgagaaattcaatacttcaagccagattttgtttgtaaaagttccacatgac
tcagtgtggaaaatggactggagatcggtggagtggaggcctgaggagaggtga

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_4|99_aa
MLRGEEKLPESEAIQSKQNHDDQVQLSLDSLSVVEASFTIINQPSREVHVSKPAGGAPEA
FQQPLNQYLSSTYYVAERDFPVFGDIVVKKMQQILVIME

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_4|300_bp
atgctaagaggagaggagaagctgcctgagagtgaagcaatacagagcaaacagaaccat
gatgaccaagtccagctctctcttgattctctttctgtggtagaagccagtttcaccatc
ataaatcaaccctccagagaggttcatgtgagtaagcctgcaggtggagctcctgaggcc
ttccaacagccattaaaccagtacttatcaagcacctactatgtagcagaaagagatttt
ccagtatttggggatatagtggtcaaaaagatgcaacaaatcctcgtcatcatggagtaa

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_5|329_aa
MEITSQDVFALAPGAFPILFGPGRSADYSAQLMSSTAGGEVGRAGDSLTLPEGLGGHEGE
EDALVQGSKDSRPRAWSHTRSHTPNAGREGDRMQRSVMWMPDSEMAAPDLLDPKSAAQNS
KPRLSFSTKPTVLASRVESDTTINVMKWKTVSTIFLVVVLYLIIGATVFKALEQPHEISQ
RTTIVIQKQTFISQHSCVNSTELDELIQKINLHFQKSKKKAVHFISLFKNSFDTRLHNPQ
MEGNISEVPKSYSGNLNTDPTVKAMFVNENTWTQEGEHHTPGPVVGDVAFHLNDPTSAVI
TQIQDLYSYTSFRASYSLRPINLASMTGA

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_5|990_bp
atggagattacaagtcaagatgtcttcgccctggctccaggtgcgttccccatccttttc
ggtcccggacgttctgcagattatagcgcccagctcatgtccagcaccgccggaggtgaa
gtggggcgagctggtgactccttaacccttcccgaaggtctggggggccacgagggcgag
gaggacgccctagtgcaggggtccaaggactcgcgtcccagagcttggtcccacacccgg
tcccacaccccgaacgctggtcgggaaggagataggatgcagcgcagtgtgatgtggatg
ccagacagcgagatggcggcacctgacttgctggatcctaaatctgccgctcagaactcc
aaaccgaggctctcgttttccacgaaacccacagtgcttgcttcccgggtggagagtgac
acgaccattaatgttatgaaatggaagacggtctccacgatattcctggtggttgtcctc
tatctgatcatcggagccaccgtgttcaaagcattggagcagcctcatgagatttcacag
aggaccaccattgtgatccagaagcaaacattcatatcccaacattcctgtgtcaattcg
acggagctggatgaactcattcagaaaataaatttacactttcaaaagagcaagaaaaaa
gctgtacacttcattagtctgtttaaaaatagctttgacactcgattgcataatccccaa
atggaaggaaatatatcagaagtgcccaaaagctattcaggaaacctaaacacagacccc
acagtgaaagctatgtttgtgaatgagaacacttggacacaggaaggggaacatcacaca
ccagggcctgttgtgggtgatgtagcctttcatctaaatgacccaacttcagctgtcatc
actcagattcaggatctgtatagttacacatcattcagagcctcatatagcttgcgaccc
ataaaccttgcatctatgacaggggcatga

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_6|65_aa
MTRSGGYQGRIKEVDPDRGKKELEKTQVKFLSTQCLLNGTQLQKSPQIVNNPEVPICSAQ
RTRRS

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_6|198_bp
atgaccaggtctgggggataccagggtaggatcaaggaagtagatcctgataggggaaag
aaggaattagagaagacgcaagtaaaattcttgtccacccagtgtctcctcaatggaaca
cagcttcagaaatctccacaaattgtaaacaatccagaagttcctatatgctctgcgcag
aggacaaggagaagttga

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_7|168_aa
MHHINRNNDKNHMIISTDAEKAFNKIQLPFMLKTLNKLDTDVTYLKIIRAIYDKPTANIT
LNGQKRESLPLKTGTRQGCPLSPLLFNTVLEVLARAIRQEKEIKGIQVGKEEAKLPLFAD
HVIVYLENSIVSAQNLLKLISNFSKVSGYKINVQKSQAYTNNRQRAKS

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_7|507_bp
atgcatcacataaacagaaacaatgacaaaaaccacatgattatttcaacagatgcagaa
aaggccttcaataaaattcaactccccttcatgctaaaaactctcaataaactggatacc
gatgtaacatatctcaaaataataagagctatttatgacaaacccacagccaatatcaca
ctgaatgggcaaaagcgggaatctctccctttgaaaaccggcacaagacaaggatgccct
ctctcaccactcctattcaacacagtattggaagttctggccagggcaatcaggcaagag
aaagaaataaagggtattcaagtaggaaaagaggaagccaaattgcctctgtttgcagat
cacgtgattgtatatttagaaaactccatcgtctcagcccaaaatctccttaagttgata
agcaacttcagcaaagtctcaggatataaaatcaatgtgcaaaaatcacaagcatacacc
aataatagacagagagccaaatcatga

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_8|201_aa
MDEAGSHLPQQTNTGTENQTPHVLAHKWELNRFGNISPRTEGGKIFCIIYALLGIPLFGF
LLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAIIFKH
IEGWSALDAIYFVVITLTTIGFGDYVAVERAHCTTISGEHPGHSVTTHTDWYQVTTLPLP
ASLLAQEKLQQQQHSPPYPGL

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_8|606_bp
atggatgaagctggaagccatctgcctcagcaaactaacacaggaacagaaaaccaaaca
ccacatgttctcgctcataagtgggagttgaacagatttggaaacatctcaccacgcaca
gaaggcggcaaaatattctgtatcatctatgccttactgggaattcccctctttggtttt
ctcttggctggagttggagatcagctaggcaccatatttggaaaaggaattgccaaagtg
gaagatacgtttattaagtggaatgttagtcagaccaagattcgcatcatctcaacaatc
atatttatactatttggctgtgtactctttgtggctctgcctgcgatcatattcaaacac
atagaaggctggagtgccctggacgccatttattttgtggttatcactctaacaactatt
ggatttggtgactacgttgcagtggaaagggcccactgcactacaatctcaggggagcat
cctgggcactcagtaacgacacatacagattggtaccaggtcaccactctgcccctgcct
gcaagtctccttgcccaagagaaactgcagcagcagcagcattccccaccctacccaggc
ctgtga

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_9|163_aa
MAGNAGERTEQGGSDIEYLDFYKPVVWFWILVGLAYFAAVLSMIGDWLRVISKKTKEEVG
EFRAHAAEWTANVTAEFKETRRRLSVEIYDKFQRATSIKRKLSAELAGNHNQELTPCRRT
LSVNHLTSERDVLPPLLKTESIYLNGLTPHCAGEEIAVIENIK

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_9|492_bp
atggctgggaacgctggagagaggacagagcaaggtggatccgatattgaatatctggac
ttctataagcctgtcgtgtggttctggatccttgtagggcttgcttactttgctgctgtc
ctgagcatgattggagattggctccgagtgatatctaaaaagacaaaagaagaggtggga
gagttcagagcacacgctgctgagtggacagccaacgtcacagccgaattcaaagaaacc
aggaggcgactgagtgtggagatttatgacaagttccagcgggccacctccatcaagcgg
aagctctcggcagaactggctggaaaccacaatcaggagctgactccttgtaggaggacc
ctgtcagtgaaccacctgaccagcgagagggatgtcttgcctcccttactgaagactgag
agtatctatctgaatggtttgacgccacactgtgctggtgaagagattgctgtgattgag
aacatcaaatag

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_10|192_aa
MTKSIFVTKELTWYGLREKVSDKNVRSVIKDLIQKLKETSKIALHFVLRLNSKFSEFLNA
LILLLKTCVLITSVQLVEIRAPEPSLPRSLSKPFGEIKPFDEKVLVQLVLVHWSLEKRPC
RLETFVYGKGVSRQLVLVFSGREHNGADLQVREKLRTGFTCCVETNKQTGVLWSQNNNNN
NNNNNNNNNNKL

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_10|579_bp
atgactaaaagcatatttgtgacaaaggaattaacttggtatggcttgagggagaaagtg
agtgataaaaatgtaaggagtgtcataaaggaccttattcagaagctaaaggaaacttct
aaaattgcactgcattttgtgcttcgtctgaactctaaattctcagagtttctcaatgct
ttgatccttcttttaaaaacctgtgtgctcattacatctgtacagcttgtggaaattagg
gcaccagagccttctcttcccaggtccctctcaaagccctttggagaaattaagccattt
gatgagaaggtgcttgttcagctagtgctggtgcattggagcttggagaaaaggccctgt
agacttgagacctttgtctacggaaaaggggtcagcagacagttggtgctggtgttttca
ggcagagaacataatggagctgatctgcaagtgcgggaaaaactacgaacgggtttcacc
tgctgcgttgaaacaaacaagcaaactggtgtactatggagtcaaaacaacaacaacaac
aacaacaacaacaacaacaacaacaacaacaaactctga

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_11|72_aa
MEYYSAIKKKKNPVIDSNMNGIGRHYGLSGGCPYLTPEVDPGWYKPVKLLSSGTPPGSHG
KELGKIPVFLAE

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_11|219_bp
atggaatactattcagccataaaaaagaaaaaaaatcctgtcattgacagtaacatgaat
ggaattggaagacattatggactcagtggaggatgcccctacctaactccagaggtagat
cctggttggtataaaccagtcaagcttttatcttcaggaactccaccaggttctcatggt
aaagaactgggaaaaattcctgtgtttctggcagaataa

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_12|70_aa
MVKKKSKVQKREEFLCMLEMKKRQLPGNSHTQMLIPAARYKVDFNRLIIPSFDEDVEQLE
LSNNADGNVK

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_12|213_bp
atggtgaaaaagaaaagcaaggttcaaaaacgagaagagtttctgtgtatgttagaaatg
aaaaagcgtcagttacctgggaacagccatacccagatgctcatacctgcagcaagatat
aaggtagattttaatagattgataattccgagttttgatgaggatgtggagcaactggaa
ctttcaaataatgctgatgggaatgtaaaatga

>gi568815597f:214983386_215335142|GENSCAN_predicted_peptide_13|129_aa
MPTVIWTIKSRLKCSQFGDEEFVGNWSKSHSCYALAKGLVAFGPCPRDLWNFELERHDLG
YLVEEISKQQRIQEEAEHKSLENLQANDAIENKNPFSGKKFKPAAAICISNKDPNVNPQD
NGEMSPGHV

>gi568815597f:214983386_215335142|GENSCAN_predicted_CDS_13|390_bp
atgccgacagtgatatggacaattaagtccaggctgaagtgttctcagtttggagatgag
gaatttgttgggaactggagtaaaagtcactcttgttatgctttagcaaagggactggtg
gcatttggcccctgccctagagatctatggaactttgaacttgagagacatgatttaggg
tatctggtagaagaaatttctaagcagcaaagaattcaagaggaagcagagcataaaagt
ttggaaaatttgcaggctaatgatgcaatagaaaataaaaacccattttctgggaagaaa
ttcaagcctgctgcagctatttgcataagtaacaaggacccaaatgttaatccccaagac
aatggggaaatgtctccaggacatgtctga