GENSCAN 1.0	Date run:  3-Jul-118	Time: 15:00:08

Sequence gi568815597f:214986368_215335142 : 348775 bp : 36.68% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  13143  13271  129  2  0   92   44    70 0.250   3.20
 1.02 Term +  19390  19539  150  0  0   53   45   163 0.541   5.43
 1.03 PlyA +  19776  19781    6                               1.05

 2.03 PlyA -  19838  19833    6                               1.05
 2.02 Term -  44008  43680  329  2  2   15   42   218 0.491   3.79
 2.01 Init -  51890  51827   64  2  1   49  105    45 0.496   3.66
 2.00 Prom -  55518  55479   40                              -6.05

 3.00 Prom +  56594  56633   40                              -2.75
 3.01 Init +  71278  71292   15  0  0   89  116     7 0.352   4.01
 3.02 Intr +  86668  86790  123  0  0   24  107    82 0.297   3.56
 3.03 Term +  87541  87696  156  0  0   51   42   102 0.376  -1.15
 3.04 PlyA +  88199  88204    6                               1.05

 4.04 PlyA -  88471  88466    6                               1.05
 4.03 Term -  89219  89113  107  0  2   17   41   131 0.665  -1.11
 4.02 Intr -  90235  90118  118  1  1   93  103    69 0.911   8.02
 4.01 Init -  90673  90599   75  1  0   43   59    85 0.912   2.24
 4.00 Prom -  92032  91993   40                              -5.75

 5.00 Prom +  92157  92196   40                              -5.45
 5.01 Init +  92278  92296   19  0  1   71  100    -2 0.465  -0.47
 5.02 Intr +  95755  95892  138  2  0   87   44   202 0.848  15.21
 5.03 Intr +  95978  96133  156  0  0   66   42   178 0.447  10.06
 5.04 Intr + 100001 100311  311  0  2   85   95   249 0.423  20.41
 5.05 Intr + 130167 130284  118  2  1   71  121    23 0.080   3.02
 5.06 Intr + 139110 139224  115  1  1   66   23   107 0.043   0.59
 5.07 Intr + 157958 158038   81  2  0   60   94    73 0.013   2.93
 5.08 Term + 160811 160862   52  2  1  110   41    51 0.206  -1.48
 5.09 PlyA + 162079 162084    6                               1.05

 6.03 PlyA - 164373 164368    6                               1.05
 6.02 Term - 173109 172952  158  1  2   72   54    92 0.722   1.31
 6.01 Init - 174616 174577   40  1  1   67  116    18 0.542   2.90
 6.00 Prom - 176422 176383   40                              -3.85

 7.02 PlyA - 176522 176517    6                               1.05
 7.01 Sngl - 177348 176842  507  0  0   51   48   299 0.727  17.99
 7.00 Prom - 178759 178720   40                              -7.65

 8.00 Prom + 182011 182050   40                              -4.75
 8.01 Init + 182191 182284   94  0  1   83   42    30 0.464  -1.51
 8.02 Intr + 182832 182992  161  1  2   26   68   113 0.624   1.89
 8.03 Intr + 185630 185816  187  1  1   81  115   122 0.839  12.54
 8.04 Term + 196074 196237  164  1  2   39   49   123 0.168   0.62
 8.05 PlyA + 198112 198117    6                               1.05

 9.00 Prom + 198270 198309   40                              -4.25
 9.01 Init + 203853 203886   34  2  1   68  116    29 0.057   3.79
 9.02 Intr + 208586 208725  140  0  2   95   78   118 0.051  10.76
 9.03 Term + 248461 248778  318  0  0   96   41   309 0.627  20.90
 9.04 PlyA + 249854 249859    6                               1.05

10.00 Prom + 258245 258284   40                              -6.75
10.01 Init + 264731 264808   78  1  0   32  110    22 0.057  -0.09
10.02 Intr + 267065 267225  161  1  2   87   59   124 0.071   7.26
10.03 Intr + 278162 278208   47  2  2   81   83    35 0.134  -0.57
10.04 Term + 283407 283699  293  1  2   45   45   383 0.898  24.22
10.05 PlyA + 284030 284035    6                               1.05

11.00 Prom + 286005 286044   40                              -6.55
11.01 Init + 286061 286139   79  1  1   84  115    16 0.537   5.17
11.02 Intr + 304028 304092   65  0  2  118  102    78 0.905   9.72
11.03 Term + 308295 308369   75  2  0   26   49   116 0.416  -1.64
11.04 PlyA + 310525 310530    6                               1.05

12.03 PlyA - 310820 310815    6                               1.05
12.02 Term - 312819 312730   90  0  0   96   40    95 0.181   2.24
12.01 Init - 323255 323133  123  2  0   54   45   102 0.340   2.72
12.00 Prom - 333430 333391   40                              -4.95

13.02 PlyA - 334039 334034    6                               1.05
13.01 Sngl - 338266 337877  390  1  0   87   53   209 0.735  13.27
13.00 Prom - 339978 339939   40                              -3.85


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_1|92_aa
MASQRSTKRHSPAIVSCIPAWPVWHCLYKWCGKTASKQPSGEEETDLQGNIHTQKGNSMG
RWLVSTSDSVLEITDKKPWRKNGIKDQKHDDS

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_1|279_bp
atggcttcacaaagatccacaaagagacacagtcctgccatcgtcagctgcatccctgct
tggcctgtgtggcattgtttgtacaaatggtgtggcaaaactgcatctaaacagccatct
ggggaagaagaaactgatctacagggtaacattcacacacaaaaaggaaacagtatggga
cgatggcttgttagtacaagtgactctgttttggaaattacggacaagaaaccttggagg
aagaacggcattaaagatcaaaagcatgatgactcctga

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_2|130_aa
MNEDYHREGLLAEILKALEGTETIKKRERQATSWEKIFAMEIPDKGLYSKIKELLKLSNE
KTNNPIKKRVKDRNRHLIREDTQMTNKRMKRCFTLHVIRKMQIKITIRYYLLEWPKSRTL
RAPNAGKDVE

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_2|393_bp
atgaatgaggactaccatagggaaggcttacttgctgagattcttaaagccctggagggg
actgagactatcaagaaaagggaaagacaagccacaagctgggagaaaatatttgcaatg
gaaatacctgataaaggactgtattccaaaataaaagaactcttaaaactcagcaatgag
aaaacaaacaacccaattaaaaaacgggtcaaagaccgtaacagacacctcatcagagaa
gatacacaaatgacaaataagcgtatgaaaagatgcttcacattacatgtcatcaggaaa
atgcaaattaagataacaataagatactacctcttagaatggcccaaatccagaacactg
agagcaccaaatgctggcaaggatgtggaataa

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_3|97_aa
MEETKGEIWTQRQIHTKGKGCEDTQREGGHETGALRLQAKEHQGLLGCSLYPEGNGKLVR
DFNEKFNTSSQILFVKVPHDSVWKMDWRSVEWRPEER

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_3|294_bp
atggaagaaacaaagggggaaatttggacacagagacagatacacacaaagggaaaagga
tgtgaagacacacagagagaaggtggccatgagactggagcgctgcgtctacaagccaag
gaacaccaaggattgctgggatgtagtctctatcctgaaggcaatgggaagctagtgcgg
gattttaatgagaaattcaatacttcaagccagattttgtttgtaaaagttccacatgac
tcagtgtggaaaatggactggagatcggtggagtggaggcctgaggagaggtga

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_4|99_aa
MLRGEEKLPESEAIQSKQNHDDQVQLSLDSLSVVEASFTIINQPSREVHVSKPAGGAPEA
FQQPLNQYLSSTYYVAERDFPVFGDIVVKKMQQILVIME

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_4|300_bp
atgctaagaggagaggagaagctgcctgagagtgaagcaatacagagcaaacagaaccat
gatgaccaagtccagctctctcttgattctctttctgtggtagaagccagtttcaccatc
ataaatcaaccctccagagaggttcatgtgagtaagcctgcaggtggagctcctgaggcc
ttccaacagccattaaaccagtacttatcaagcacctactatgtagcagaaagagatttt
ccagtatttggggatatagtggtcaaaaagatgcaacaaatcctcgtcatcatggagtaa

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_5|329_aa
MEITSQDVFALAPGAFPILFGPGRSADYSAQLMSSTAGGEVGRAGDSLTLPEGLGGHEGE
EDALVQGSKDSRPRAWSHTRSHTPNAGREGDRMQRSVMWMPDSEMAAPDLLDPKSAAQNS
KPRLSFSTKPTVLASRVESDTTINVMKWKTVSTIFLVVVLYLIIGATVFKALEQPHEISQ
RTTIVIQKQTFISQHSCVNSTELDELIQKINLHFQKSKKKAVHFISLFKNSFDTRLHNPQ
MEGNISEVPKSYSGNLNTDPTVKAMFVNENTWTQEGEHHTPGPVVGDVAFHLNDPTSAVI
TQIQDLYSYTSFRASYSLRPINLASMTGA

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_5|990_bp
atggagattacaagtcaagatgtcttcgccctggctccaggtgcgttccccatccttttc
ggtcccggacgttctgcagattatagcgcccagctcatgtccagcaccgccggaggtgaa
gtggggcgagctggtgactccttaacccttcccgaaggtctggggggccacgagggcgag
gaggacgccctagtgcaggggtccaaggactcgcgtcccagagcttggtcccacacccgg
tcccacaccccgaacgctggtcgggaaggagataggatgcagcgcagtgtgatgtggatg
ccagacagcgagatggcggcacctgacttgctggatcctaaatctgccgctcagaactcc
aaaccgaggctctcgttttccacgaaacccacagtgcttgcttcccgggtggagagtgac
acgaccattaatgttatgaaatggaagacggtctccacgatattcctggtggttgtcctc
tatctgatcatcggagccaccgtgttcaaagcattggagcagcctcatgagatttcacag
aggaccaccattgtgatccagaagcaaacattcatatcccaacattcctgtgtcaattcg
acggagctggatgaactcattcagaaaataaatttacactttcaaaagagcaagaaaaaa
gctgtacacttcattagtctgtttaaaaatagctttgacactcgattgcataatccccaa
atggaaggaaatatatcagaagtgcccaaaagctattcaggaaacctaaacacagacccc
acagtgaaagctatgtttgtgaatgagaacacttggacacaggaaggggaacatcacaca
ccagggcctgttgtgggtgatgtagcctttcatctaaatgacccaacttcagctgtcatc
actcagattcaggatctgtatagttacacatcattcagagcctcatatagcttgcgaccc
ataaaccttgcatctatgacaggggcatga

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_6|65_aa
MTRSGGYQGRIKEVDPDRGKKELEKTQVKFLSTQCLLNGTQLQKSPQIVNNPEVPICSAQ
RTRRS

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_6|198_bp
atgaccaggtctgggggataccagggtaggatcaaggaagtagatcctgataggggaaag
aaggaattagagaagacgcaagtaaaattcttgtccacccagtgtctcctcaatggaaca
cagcttcagaaatctccacaaattgtaaacaatccagaagttcctatatgctctgcgcag
aggacaaggagaagttga

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_7|168_aa
MHHINRNNDKNHMIISTDAEKAFNKIQLPFMLKTLNKLDTDVTYLKIIRAIYDKPTANIT
LNGQKRESLPLKTGTRQGCPLSPLLFNTVLEVLARAIRQEKEIKGIQVGKEEAKLPLFAD
HVIVYLENSIVSAQNLLKLISNFSKVSGYKINVQKSQAYTNNRQRAKS

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_7|507_bp
atgcatcacataaacagaaacaatgacaaaaaccacatgattatttcaacagatgcagaa
aaggccttcaataaaattcaactccccttcatgctaaaaactctcaataaactggatacc
gatgtaacatatctcaaaataataagagctatttatgacaaacccacagccaatatcaca
ctgaatgggcaaaagcgggaatctctccctttgaaaaccggcacaagacaaggatgccct
ctctcaccactcctattcaacacagtattggaagttctggccagggcaatcaggcaagag
aaagaaataaagggtattcaagtaggaaaagaggaagccaaattgcctctgtttgcagat
cacgtgattgtatatttagaaaactccatcgtctcagcccaaaatctccttaagttgata
agcaacttcagcaaagtctcaggatataaaatcaatgtgcaaaaatcacaagcatacacc
aataatagacagagagccaaatcatga

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_8|201_aa
MDEAGSHLPQQTNTGTENQTPHVLAHKWELNRFGNISPRTEGGKIFCIIYALLGIPLFGF
LLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAIIFKH
IEGWSALDAIYFVVITLTTIGFGDYVAVERAHCTTISGEHPGHSVTTHTDWYQVTTLPLP
ASLLAQEKLQQQQHSPPYPGL

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_8|606_bp
atggatgaagctggaagccatctgcctcagcaaactaacacaggaacagaaaaccaaaca
ccacatgttctcgctcataagtgggagttgaacagatttggaaacatctcaccacgcaca
gaaggcggcaaaatattctgtatcatctatgccttactgggaattcccctctttggtttt
ctcttggctggagttggagatcagctaggcaccatatttggaaaaggaattgccaaagtg
gaagatacgtttattaagtggaatgttagtcagaccaagattcgcatcatctcaacaatc
atatttatactatttggctgtgtactctttgtggctctgcctgcgatcatattcaaacac
atagaaggctggagtgccctggacgccatttattttgtggttatcactctaacaactatt
ggatttggtgactacgttgcagtggaaagggcccactgcactacaatctcaggggagcat
cctgggcactcagtaacgacacatacagattggtaccaggtcaccactctgcccctgcct
gcaagtctccttgcccaagagaaactgcagcagcagcagcattccccaccctacccaggc
ctgtga

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_9|163_aa
MAGNAGERTEQGGSDIEYLDFYKPVVWFWILVGLAYFAAVLSMIGDWLRVISKKTKEEVG
EFRAHAAEWTANVTAEFKETRRRLSVEIYDKFQRATSIKRKLSAELAGNHNQELTPCRRT
LSVNHLTSERDVLPPLLKTESIYLNGLTPHCAGEEIAVIENIK

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_9|492_bp
atggctgggaacgctggagagaggacagagcaaggtggatccgatattgaatatctggac
ttctataagcctgtcgtgtggttctggatccttgtagggcttgcttactttgctgctgtc
ctgagcatgattggagattggctccgagtgatatctaaaaagacaaaagaagaggtggga
gagttcagagcacacgctgctgagtggacagccaacgtcacagccgaattcaaagaaacc
aggaggcgactgagtgtggagatttatgacaagttccagcgggccacctccatcaagcgg
aagctctcggcagaactggctggaaaccacaatcaggagctgactccttgtaggaggacc
ctgtcagtgaaccacctgaccagcgagagggatgtcttgcctcccttactgaagactgag
agtatctatctgaatggtttgacgccacactgtgctggtgaagagattgctgtgattgag
aacatcaaatag

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_10|192_aa
MTKSIFVTKELTWYGLREKVSDKNVRSVIKDLIQKLKETSKIALHFVLRLNSKFSEFLNA
LILLLKTCVLITSVQLVEIRAPEPSLPRSLSKPFGEIKPFDEKVLVQLVLVHWSLEKRPC
RLETFVYGKGVSRQLVLVFSGREHNGADLQVREKLRTGFTCCVETNKQTGVLWSQNNNNN
NNNNNNNNNNKL

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_10|579_bp
atgactaaaagcatatttgtgacaaaggaattaacttggtatggcttgagggagaaagtg
agtgataaaaatgtaaggagtgtcataaaggaccttattcagaagctaaaggaaacttct
aaaattgcactgcattttgtgcttcgtctgaactctaaattctcagagtttctcaatgct
ttgatccttcttttaaaaacctgtgtgctcattacatctgtacagcttgtggaaattagg
gcaccagagccttctcttcccaggtccctctcaaagccctttggagaaattaagccattt
gatgagaaggtgcttgttcagctagtgctggtgcattggagcttggagaaaaggccctgt
agacttgagacctttgtctacggaaaaggggtcagcagacagttggtgctggtgttttca
ggcagagaacataatggagctgatctgcaagtgcgggaaaaactacgaacgggtttcacc
tgctgcgttgaaacaaacaagcaaactggtgtactatggagtcaaaacaacaacaacaac
aacaacaacaacaacaacaacaacaacaacaaactctga

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_11|72_aa
MEYYSAIKKKKNPVIDSNMNGIGRHYGLSGGCPYLTPEVDPGWYKPVKLLSSGTPPGSHG
KELGKIPVFLAE

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_11|219_bp
atggaatactattcagccataaaaaagaaaaaaaatcctgtcattgacagtaacatgaat
ggaattggaagacattatggactcagtggaggatgcccctacctaactccagaggtagat
cctggttggtataaaccagtcaagcttttatcttcaggaactccaccaggttctcatggt
aaagaactgggaaaaattcctgtgtttctggcagaataa

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_12|70_aa
MVKKKSKVQKREEFLCMLEMKKRQLPGNSHTQMLIPAARYKVDFNRLIIPSFDEDVEQLE
LSNNADGNVK

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_12|213_bp
atggtgaaaaagaaaagcaaggttcaaaaacgagaagagtttctgtgtatgttagaaatg
aaaaagcgtcagttacctgggaacagccatacccagatgctcatacctgcagcaagatat
aaggtagattttaatagattgataattccgagttttgatgaggatgtggagcaactggaa
ctttcaaataatgctgatgggaatgtaaaatga

>gi568815597f:214986368_215335142|GENSCAN_predicted_peptide_13|129_aa
MPTVIWTIKSRLKCSQFGDEEFVGNWSKSHSCYALAKGLVAFGPCPRDLWNFELERHDLG
YLVEEISKQQRIQEEAEHKSLENLQANDAIENKNPFSGKKFKPAAAICISNKDPNVNPQD
NGEMSPGHV

>gi568815597f:214986368_215335142|GENSCAN_predicted_CDS_13|390_bp
atgccgacagtgatatggacaattaagtccaggctgaagtgttctcagtttggagatgag
gaatttgttgggaactggagtaaaagtcactcttgttatgctttagcaaagggactggtg
gcatttggcccctgccctagagatctatggaactttgaacttgagagacatgatttaggg
tatctggtagaagaaatttctaagcagcaaagaattcaagaggaagcagagcataaaagt
ttggaaaatttgcaggctaatgatgcaatagaaaataaaaacccattttctgggaagaaa
ttcaagcctgctgcagctatttgcataagtaacaaggacccaaatgttaatccccaagac
aatggggaaatgtctccaggacatgtctga