GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:15:59

Sequence gi568815597r:212735873_212936149 : 200277 bp : 41.71% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1907   1902    6                               1.05
 1.03 Term -  21288  21157  132  0  0  105   43    86 0.014   2.91
 1.02 Intr -  48621  48491  131  1  2   70   99   134 0.971  12.19
 1.01 Init -  55891  55555  337  1  1   86    1   366 0.693  25.19
 1.00 Prom -  56283  56244   40                             -10.65

 2.00 Prom +  58553  58592   40                             -10.55
 2.01 Init +  58874  58936   63  1  0   34   61    25 0.329  -4.40
 2.02 Intr +  59223  59255   33  2  0   84  115    72 0.965   7.00
 2.03 Intr +  60645  60718   74  2  2  129   43   117 0.854   8.59
 2.04 Intr +  61240  61324   85  1  1   84   87    25 0.698   0.90
 2.05 Intr +  66829  66891   63  0  0  122   82    80 0.991   8.80
 2.06 Term +  88318  88725  408  0  0  -71   38   381 0.176  11.43
 2.07 PlyA +  90888  90893    6                              -0.45

 3.03 PlyA -  91851  91846    6                               1.05
 3.02 Term -  93029  92898  132  2  0  107   54    91 0.074   4.71
 3.01 Init - 115129 113954 1176  1  0   70   86   464 0.021  37.87
 3.00 Prom - 120395 120356   40                              -3.35

 4.00 Prom + 120512 120551   40                              -7.45
 4.01 Sngl + 122581 123405  825  0  0   65   43   756 0.905  62.28
 4.02 PlyA + 123856 123861    6                               1.05

 5.00 Prom + 124893 124932   40                              -5.95
 5.01 Init + 128442 128647  206  2  2   45   52   236 0.344  14.07
 5.02 Intr + 152617 152722  106  1  1   55   97    87 0.484   5.60
 5.03 Intr + 153274 153385  112  0  1  103   99   -20 0.412  -0.37
 5.04 Intr + 154650 154764  115  1  1   11   59    71 0.190  -4.91
 5.05 Intr + 156728 157130  403  2  1   57   78   326 0.462  22.00
 5.06 Term + 159344 159418   75  1  0   91   49   103 0.990   3.56
 5.07 PlyA + 159518 159523    6                               1.05

 6.00 Prom + 160045 160084   40                              -4.15
 6.01 Init + 164185 164323  139  0  1   67   81    92 0.563   5.52
 6.02 Intr + 180128 180226   99  0  0   95   32   134 0.053   7.66
 6.03 Intr + 182464 182514   51  2  0   96  119    49 0.107   6.76
 6.04 Term + 184101 184255  155  1  2   76   55    49 0.053  -2.50
 6.05 PlyA + 184493 184498    6                               1.05

 7.03 PlyA - 184538 184533    6                               1.05
 7.02 Term - 185482 185229  254  2  2   71   39   199 0.727   8.12
 7.01 Intr - 188975 188784  192  0  0   60   65   137 0.694   7.14

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  68448  68561  114  2  0  112   39    67 0.932   1.79
S.002 Sngl - 115129 113393 1737  1  0   70   38   484 0.932  36.16


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:212735873_212936149|GENSCAN_predicted_peptide_1|199_aa
MAGSPELVVLDPPWDKELAAGTESQALVSATPREDFRVRCTSKRAVTEMLQLCGRFVQKL
GDALPEEIREPALRDAQWVRDQLASSLLIILLPNTQDLRIQKDPTPGLGRINDSDIKVLE
DQFDEIIVDIATKRKQYPRKILECVIKTIKAKQEILDIPRTHWPYDFHTRNSLYLKLLSE
TTCLTLALHSALCSKCHFI

>gi568815597r:212735873_212936149|GENSCAN_predicted_CDS_1|600_bp
atggcggggtctcctgagttggtggtccttgaccctccatgggacaaggagctcgcggct
ggcacagagagccaggccttggtctccgccactccccgagaagactttcgggtgcgctgc
acctcgaagcgggctgtgaccgaaatgctacaactgtgcggccgcttcgtgcaaaagctc
ggggacgctctgccggaggagattcgggagcccgctctgcgagatgcgcagtgggtacgg
gaccagttagccagttctttactcatcatcctcttacccaacacccaggatcttaggatt
cagaaagatcccacgccaggccttggcagaattaacgattctgacatcaaagtacttgaa
gatcagtttgatgaaatcatagtagatatagccacaaaacgtaagcagtatcccagaaag
atcctggaatgtgtcatcaaaaccataaaagcaaaacaagaaattctggacataccaaga
acacactggccctacgactttcatactcgcaactccctgtatttgaaactgctctccgaa
actacctgcctgactcttgcacttcattcagctctctgttcaaagtgtcacttcatctga

>gi568815597r:212735873_212936149|GENSCAN_predicted_peptide_2|241_aa
MREWYCRSEGWKAFQEGRSKQDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNG
FVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEYAAKRFRKAQHPIV
ECRTHSMMPQQLQETRDLAHHQACLRDHSPAHRRGLSAGPGERHHQQWSPGGLHTYWASR
AWAVRPQAVEVSPLCRVNQAIWLLSTGAREALWGSPTKKREKRREEKRREERERERKIKN
C

>gi568815597r:212735873_212936149|GENSCAN_predicted_CDS_2|726_bp
atgagagagtggtattgcagaagtgaagggtggaaagcatttcaagaaggaaggagtaag
caagatttggatgatgtgttggagaaagccaagaaggccaatgttgtggcccttgtggca
gttgccgaacattcaggagaatttgaaaagattatgcaactttcagaaaggtataatggg
tttgtcctgccatgcttgggtgttcatccagttcaaggacttccaccagaagaccaaaga
agtgtcacactaaaggatttggatgtagctttgcccattattgagaattataaggatcgg
ttgttggcaattggagagtatgccgccaaacgcttccgcaaagctcagcaccccattgtg
gagtgccgcactcactccatgatgccgcaacaactgcaagaaactcgtgaccttgcgcat
caccaagcatgccttcgagaccattcacctgctcacaggagaggactctctgcaggtcct
ggtgaacgccatcatcaacagtggtccccgggaggactccatacgtattgggcgagccga
gcctgggccgtgagaccacaggctgtggaagtgtcccccttgtgccgtgtgaatcaggcc
atctggctgttgtccacaggtgctcgtgaggccctttggggcagccccacgaaaaagaga
gagaagagaagagaagagaagagaagagaagaaagagaaagagaaagaaagatcaaaaac
tgttaa

>gi568815597r:212735873_212936149|GENSCAN_predicted_peptide_3|435_aa
MDKFLDTYTLPRLNQEEVESLNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILA
NRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKI
QQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLF
NIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKV
SGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPL
LKEIKEDTNKWKNIPCSWVGRINIVKMAILPKEAQIHREPKHSDIRRDMDKPAGLKPYVS
QDYIVGHSVDKTHQP

>gi568815597r:212735873_212936149|GENSCAN_predicted_CDS_3|1308_bp
atggataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggagctgaaattgtggcaataatcaatagtttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcattctgataccaaagccgggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaatatacgcaaatcaataaatgtaatccagcatataaacaga
gccaaagacaaaaaccacatgattatctcaatagatgcagaaaaagcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattaggtattgatgggacatatttcaaa
ataataagagctatctatgacaaacccacagccaatatcatactgaacgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattc
aacatagtgttggaagttctggccagggcaatcaggcaggagaaggaaataaaaggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtttatcta
gaaaaccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaacaacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatac
ctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtagga
agaatcaatatcgtgaaaatggccatactgcccaaggaagctcagattcatagagagcca
aagcattctgatattagaagggatatggataagccagctggcttaaaaccctatgtcagt
caggactatatagtagggcacagtgtggataagactcatcaaccatga

>gi568815597r:212735873_212936149|GENSCAN_predicted_peptide_4|274_aa
MARPDDEEGAAVAPGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAA
SGVLGGPQTPLAPEEETQARLLPAGAGAETPGAESSPLPLTALSPRRFVVLLIFSLYSLV
NAFQWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLAYVPLIFPATWLLDTRGLRLTALLG
SGLNCLGAWIKCGSVQQHLFWVTMLGQCLCSVAQVFILGLPSRIASVWFGPKEVSTACAT
AVLGNQVSTGVVGESQILKRPEKVIGRENYGLYG

>gi568815597r:212735873_212936149|GENSCAN_predicted_CDS_4|825_bp
atggcgcggccagacgatgaggagggggcggcggtggcgcccggacacccgctcgcgaaa
ggatacctcccgttgccgaggggcgcgcccgttgggaaggagagcgtggagctgcagaac
gggcccaaagcgggcaccttcccggtgaatggggccccccgggacagcctcgctgccgcc
tcgggagttctgggcgggcctcagactccactggccccagaagaggagacccaggcccgg
ctgctgcctgcgggcgcgggagctgagaccccgggggccgagagcagcccgctgcccctt
acggcgctctccccgcggcgcttcgtggtgctcctgatcttcagcctgtactcgctggtc
aacgcctttcagtggatccagtacagcatcattagcaacgtcttcgagggcttctacggt
gtcaccttgctgcacatcgactggctgtccatggtgtacatgctggcctacgtgcccctc
atcttcccggccacctggctgctggacaccagaggcctgcggctcaccgccctgctgggc
tccggcctcaactgcctgggtgcctggatcaagtgcggcagtgtgcagcagcatctcttc
tgggtcaccatgttgggccagtgcttgtgctcggtggcccaggtgttcatcctgggcttg
ccctcccgcatcgcctcagtgtggtttgggcccaaagaggtgtccacagcttgtgccacc
gccgtgctgggcaatcaggtaagtactggagtggtaggtgaaagtcagatccttaaaaga
ccggaaaaagtcataggccgtgagaactatggcctgtatggatga

>gi568815597r:212735873_212936149|GENSCAN_predicted_peptide_5|338_aa
MLTSEWSWAAASCSAEFQTVATIYLLGHSSKARLPPLVTESSRLSLSLEAVSQNQLQAAI
ISLEEALGSFFMTGYLPLGFEFAVEITYPESEGTSSGLLNASAQIFGILFTLAQGKLTSD
YGPKAGNIFLCVWMFIGIILTGHIQNCPGPHMGCRPQVEQAYTTPFHIKALSIRGFWYLR
ALMKMYEEINVAFMSGNTASLLQPVDQGVISTFKSYSLRNTLQKAVAARNNYSSLGSEQS
KLRTFWKGCTILDAIKNILDSWEEVKLSTLTGVWRKLIPILMDDFEVFKTSVEEIAADVV
GITRELELEVEYEEIPADSPTDQEPKTVMLSKQSESAI

>gi568815597r:212735873_212936149|GENSCAN_predicted_CDS_5|1017_bp
atgttgactagtgaatggtcctgggcagcagcaagctgttcagcagaatttcaaactgtg
gcaactatctacttgttaggccactccagcaaagcacggctgccaccactcgtcactgag
tcctctcgtctgagcctgtctcttgaagcagtcagtcaaaatcaactgcaagcagccatc
atcagtttggaagaagctttgggaagcttcttcatgactggttacctccctttgggtttt
gaatttgctgttgaaatcacttaccctgaatctgaaggtacttcatctggtcttcttaat
gcttctgcacagatatttggaattttgttcacattggctcaaggaaagctcacatcagac
tatggtcctaaggcagggaacatttttctctgtgtctggatgtttataggcatcatatta
acaggccacattcaaaactgtcctgggccacatatgggctgcagaccacaggttgaacaa
gcttatactacaccatttcatataaaggccttgagcattcgtggattttggtatctgaga
gctctgatgaagatgtacgaggagatcaatgttgctttcatgtctggaaacacagcatcc
cttctgcagcccgtggatcaaggagtaatttcaactttcaagtcttattctttaagaaat
acacttcaaaaggctgtagctgccagaaataattattcctctcttggatctgagcaaagt
aaattgagaactttctggaaaggatgcaccatcctagatgccattaagaacattcttgat
tcatgggaggaggtcaaactatcaacattaacaggagtttggaggaagttaattcccatt
ctcatggatgattttgaggtgttcaagacttcagtggaggaaatagctgcagatgtggtg
ggaataacaagagaactggaattagaagtggaatatgaagagataccagctgacagtccc
acagaccaagaaccaaaaacggttatgttgtccaagcagtcagaatcagcaatttga

>gi568815597r:212735873_212936149|GENSCAN_predicted_peptide_6|147_aa
MTHGHPKFSVHLTPISLRLASQACHIGWQLQASNIETDGLIVELKQVPGDEQARNGGPAL
KQQMHVGQQDLDTVLASEPGFLPALSELTVPKGHLAGLRHDCLDYSMEPGPVQTLKRGLL
QPTCWAAALVPSRCPPFCAHLIFGASQ

>gi568815597r:212735873_212936149|GENSCAN_predicted_CDS_6|444_bp
atgacccatggccaccccaaattctctgtgcacctcacccccatctccctgaggctggct
tcccaagcatgccacattggatggcaactgcaagcatcaaatatagagacagatggcttg
attgtggaattgaagcaagtccctggggatgaacaagcaagaaatggtggccctgcactc
aaacagcagatgcacgtggggcaacaggatttggacacggtgttagcctcggagccaggt
tttcttcctgcactgtctgagctgactgttcccaaaggacacttggctggcctgagacac
gattgcctggattactccatggagccggggcctgtgcagaccctcaagagaggtcttttg
cagccaacctgttgggcagctgccctggtgccctcaaggtgcccccctttctgtgcccac
ctcatctttggggcctcacagtga

>gi568815597r:212735873_212936149|GENSCAN_predicted_peptide_7|148_aa
XLEGSHKDEGVKNEESKIHLFPGLAGEQLSGAVMIWGGLAQRRMNGLEARWRKEGQKQSG
KGQRAAISPRNLGMQTLSPKPAKSEIQLRKVSNLPQVTRQVRDRTKAFEQDFQMIGVHAG
LTVSAVGMDGAHGKGANGKVLLTVLQWP

>gi568815597r:212735873_212936149|GENSCAN_predicted_CDS_7|447_bp
nagctggagggaagtcacaaggatgaaggagtgaaaaatgaggagtcaaaaattcactta
tttccaggtcttgctggggagcagctcagtggggcagtgatgatctggggaggactagcc
caaagaagaatgaacgggctagaggccaggtggaggaaggaaggccagaaacaaagtggc
aagggacaaagagcagccatatcgccaaggaacttaggaatgcaaactctcagccccaaa
ccagctaaatctgaaattcagctccgaaaagtcagtaacctgccccaagtcacacggcaa
gtaagggacaggacaaaagcatttgaacaagattttcagatgattggggtgcacgcaggt
ctgacagtctctgctgtaggaatggatggggcccacgggaagggtgcaaatgggaaagtg
cttcttactgtcctccagtggccataa